Information report for Pavir.6NG262300.2.p
Gene Details
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Functional Annotation
- Refseq: XP_025820688.1 — protein ALWAYS EARLY 2-like
- TrEMBL: A0A2T7D955 — A0A2T7D955_9POAL; Uncharacterized protein
- STRING: Si025839m — (Setaria italica)
- GO:0005730 — Cellular Component — nucleolus
- GO:0016592 — Cellular Component — mediator complex
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi3g01340.7.p, Bradi3g01340.6.p, Bradi3g01340.4.p
- Setaria italica: Seita.8G160000.4.p, Seita.8G160000.3.p, Seita.8G160000.6.p, Seita.8G160000.1.p, Seita.8G160000.2.p, Seita.8G160000.5.p
- Setaria viridis: Sevir.8G170900.7.p, Sevir.8G170900.6.p, Sevir.8G170900.5.p, Sevir.8G170900.9.p, Sevir.8G170900.1.p, Sevir.8G170900.4.p, Sevir.8G170900.8.p, Sevir.8G170900.2.p, Sevir.8G170900.3.p
- Triticum aestivum: Traes_5BS_31CD3BB2E.1
- Zea mays: GRMZM2G448104_P03
Sequences
CDS Sequence:
- >Pavir.6NG262300.2.p|Panicum_virgatum|MYB_related|Pavir.6NG262300.2.p
ATGGCTTCTGCAAGGAAAGTGAGAAATGCGAATAAACGCTTTGCCAAAATCAATGACGATTGGAAGACTGAAGATACAGCAAGTGTACCTAAAAGTAAAGTGCGAAAGAAAAAGTTATCAGACATGCTTGGGTCTCAGTGGAGTAGAGAGGAGCTCGAGCGCTTCTATGGTGCCTACAGAAAATATGGAAAAGATTGGAGAAAGATTGCTGGTGCTATCCGTGATAGGACATCGGACATGGTAGAGGCTCTTTATAACATGAATAAGGCCTATTTGTCTCTACCGGAGGGAACGGCAACTGCAGCAGGGTTAATTGCGATGATGACTGACCACTACAATATTTTGGATGGAAGTAACAGTGATCATGAAAGCAATGATTTGCCAAAAACTTCTAGAAAGCCACAGAAACGTGGTCATGCAAAGTTTCAATCTGTGTCTAAGACATCAGATATACGTTACCCTGATCAATTGCAATCTCAACCTGCTTCATCGAGCTATGGATGCCTTTCTTTGTTGAAGAAAAAACGTTCTGAAGACCTGTTTGTAGGGAACAGGCCACGTGCTGTTGGAAAAAGGACTCCAAGAGTACCTGTTGCCAGCATGTACCATCGAGATGATAGGGGTGCACCAAATAGACAAGCAAAACCAGATTCTAACAATGGTGATGATGAAGGAGCTCATGTAGCTGCGCTTGCTCTGGCAGAGGTATATCAAAGTGGAGGCTCACCTCAGGTTTCTCAAACACCTGGGAGGTCTGGCGATCATATGTTCCTGTCCCCCATTAAAAGTAATGACAGAAAAAATGTTGATTCAGAGATGGGTAGCTCAAAGTTGCATGGATTCCAGTTGGATGCTGATTACCCTGAAGCTAGCTTAGGAAGTAGGGAAGCTGAGACTGGTGACTATACTAAAGGTTCATCCTATTTGATGACTAACAAAGGATCTCCATCCGTCAAGCCTCAGAAGAAAGTAAAGAGGTCCCAAAAGAGGAGGAAAAAAGCTGCACGCAAAACAGGTGATCAGTATGAGTATGACAGAGAGGCTTGCAGTGGTACTGAAGAAGGGCATAGTGGGAGAAAGGCAAAAGAGGAACCAGAACTGGAGACATTGGGAAGAAAAACTGCATGGCCATCTAGCACATCAAATAAAAGAAGCCGTCAACTGTTTTTTGATGATGAAAGTTCAGCTCTAGATGCATTACATACTTTAGCTGATTTATCTGTGAACATCCTACAGCCATCTTCAGTTGTTGAATCTGAATCGTCAGCACAGATTAAGGATGAAAACAAAGACAATGATTCTGATGGAAAGCCTAGTATGCCTGCCGCCGTATCAGTGTATGAGCAGAAAGATAACTCCAAAAGTATAGCAAAAAAACTCAAAAGGCAGTCAGAAATTGCAAGCACTGATATGGTTACTAGGAAAAAAGCCAAACATTCTAAAGATCCTCACCATGATGGGAGCACTTCTGAAGTAAAGCAGCAAGGTTGTACATGTGGTGTTAAAACAGAAAAAAAGAAGAGGAAATCTTCCATGGGAAAGGTTCTGAAAGATGAAAAAAATATACTAAAAGATGTGGTGAAGACTGAGGTTTCTGCTGAAGAAGGGAAGACATCTTCTAATAAAGAGACAACTACACAAGGTGAAATGACTCCGCAAGCTGACTTGACCTCAAAGGTTAAAAGCCGTCGTAAATTAGGCATTCAAAAATCGCTAAGTCAAGAATGTAAACCTACTGAGGGTGCTGGTGATTCCGGAAGTGAGAAATTGTCTTATTCATTGAGTAATATTATTGATGTCAAGGACAAACTCTCTCACTGCTTGTCATCACGCTTGCTCCGTAGATGGTGCATGTTTGAGTGGTTCTATAGTGCAATTGATTATCCGTGGTTTGCAAAGAGTGAATTTGTTGAGTATTTGAATCATGTCAAGCTGGGTCATGTTCCAAGACTGACTCGTGTTGAGTGGGGTGTCATACGGAGTTCTCTTGGGAAGCCCCGTCGGTTGTCAAAACAGTTTTTGCGTGAGGAGAGAGAGAAGCTTTCCCAGTATCGTGATTCAGTTAGACAGCACTATGCTGAACTTCGATCTGGCATTAGAGAAGGTCTACCAACGGATCTTGCACGACCTCTAGCAGTTGGGCAGCGTGTTATAGCCTGCCATCCTAGAACACGGGAACTTCATGATGGGAATGTTCTGACTGTTGATCATAATCGTTGCCGGGTTCAGTTTGATCGACCTGAACTGGGTGTTGAGTTTGTGATGGATATTGATTGCATGCCCCTGCATCCCCTGGAAAATTTCCCTGAGTCTCTCAGACAGCAGAACATTGTCAACGAATATTATAGCCGCTTATCGGAAGCAAATGAGGATCAGATGAAAGAGTTGGGTACCGGAGGTTTAACAGGATTCACATCAAATTTGAATAGTGCTGATGCAACCTTCCATATCCCTCCTGGTCATCCGATAACTACTTTGATGAAGCAAGCAAAGGCCAAAGCGACAGTTAATGAGGTTACAGCTGCTACACAACAGGCAATGTACAATCAGCCATCCACTCTCTCACAGATACAGGAAAGAGAAGCTGATATAAGAGCTCTTGCTGAACTATCACGTGCTCTTGATAAAAAGGAAGCTTTACTAGTAGAGTTGAGGCACATGAATGAAGAAGTGTCTGGAAAGCAAAAGGACGGGGACATTATCAGAGACTTGGAGCATTTCAGGAAGCAATACGCTATGGTGCTTGTGCAGCTTAGAGACTCCAATGATCAAGTAGCTGCAGCCTTGCTTTCACTTCGTCAACGTAACACATATCATGGGAATGCAGTACAGTCATATCCTAAATCCATGGAAAATGGCATGGCCTTTGCTGGAGCATCAGATCCGTATAACCTTTTCGGTTATATTAATCCAGAATCTGGTTCCCAAGTGATTGAAGTTATTGAGACTTCAAAAAGCAGAGCAAAAATGATGGTCAATGTTGCTATCCAGGCAATGTGCAAAGTTAGTGAAGGAGACAATGTTTTTGCCAAAATAGGTGAAGCACTAGATAACTTGAATAGCCGTGGTACTGGTTCTGGTTCAAGCATACTTGGCATAAGACGGATACCTCCTGATTCAGGTCAGTCAAATGCATTGCATCAAGATAACGGCACACCTGCTCCTCCAATAAATAGCAATTCAAGATTGCCAAACGGGTGTGATTCTGATGGCCAATTTCCTACCGAGCTGATTTCATCCTGTGTGGCTATGATGCTTATGATAAAGAACTGCACGGACAAGCAGTATCACCCTGCTGAAGTCGCGCACATCCTCGATTCAGCACTGTCGGGCTTGCAGCCGCGCAGCTCCCAGAACATCCCAATCTTCAGGGAGATCGAGATGTGTATGGGCATCATCAAGAACCAGATGCTGGCATTGATACCCACTCCAAGTGGCTAG
Protein Sequence:
- >Pavir.6NG262300.2.p|Panicum_virgatum|MYB_related|Pavir.6NG262300.2.p
MASARKVRNANKRFAKINDDWKTEDTASVPKSKVRKKKLSDMLGSQWSREELERFYGAYRKYGKDWRKIAGAIRDRTSDMVEALYNMNKAYLSLPEGTATAAGLIAMMTDHYNILDGSNSDHESNDLPKTSRKPQKRGHAKFQSVSKTSDIRYPDQLQSQPASSSYGCLSLLKKKRSEDLFVGNRPRAVGKRTPRVPVASMYHRDDRGAPNRQAKPDSNNGDDEGAHVAALALAEVYQSGGSPQVSQTPGRSGDHMFLSPIKSNDRKNVDSEMGSSKLHGFQLDADYPEASLGSREAETGDYTKGSSYLMTNKGSPSVKPQKKVKRSQKRRKKAARKTGDQYEYDREACSGTEEGHSGRKAKEEPELETLGRKTAWPSSTSNKRSRQLFFDDESSALDALHTLADLSVNILQPSSVVESESSAQIKDENKDNDSDGKPSMPAAVSVYEQKDNSKSIAKKLKRQSEIASTDMVTRKKAKHSKDPHHDGSTSEVKQQGCTCGVKTEKKKRKSSMGKVLKDEKNILKDVVKTEVSAEEGKTSSNKETTTQGEMTPQADLTSKVKSRRKLGIQKSLSQECKPTEGAGDSGSEKLSYSLSNIIDVKDKLSHCLSSRLLRRWCMFEWFYSAIDYPWFAKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLREEREKLSQYRDSVRQHYAELRSGIREGLPTDLARPLAVGQRVIACHPRTRELHDGNVLTVDHNRCRVQFDRPELGVEFVMDIDCMPLHPLENFPESLRQQNIVNEYYSRLSEANEDQMKELGTGGLTGFTSNLNSADATFHIPPGHPITTLMKQAKAKATVNEVTAATQQAMYNQPSTLSQIQEREADIRALAELSRALDKKEALLVELRHMNEEVSGKQKDGDIIRDLEHFRKQYAMVLVQLRDSNDQVAAALLSLRQRNTYHGNAVQSYPKSMENGMAFAGASDPYNLFGYINPESGSQVIEVIETSKSRAKMMVNVAIQAMCKVSEGDNVFAKIGEALDNLNSRGTGSGSSILGIRRIPPDSGQSNALHQDNGTPAPPINSNSRLPNGCDSDGQFPTELISSCVAMMLMIKNCTDKQYHPAEVAHILDSALSGLQPRSSQNIPIFREIEMCMGIIKNQMLALIPTPSG*