Information report for Pavir.5NG035200.1.p
Gene Details
|
|
Functional Annotation
- Refseq: XP_025816481.1 — protein ALWAYS EARLY 3-like
- TrEMBL: A0A2S3HZA0 — A0A2S3HZA0_9POAL; Uncharacterized protein
- STRING: Pavir.J02622.1.p — (Panicum virgatum)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Pavir.5NG035200.1.p|Panicum_virgatum|MYB_related|Pavir.5NG035200.1.p
ATGGCCCCAGCAAAAGGTTCTCGAACTATTAACAAGACCATAATAAAAGGATATGAGGATCAACGGCAGTACGACGATCCACCTAGTTCAAGCAAAGCTAAACAAAAAAAGAGGAAAATTTCAGACTTAAATCCCAAATGGAGCAAGGATGAGCTTACACAATTTTACGAAGCCTACCGCCGACATGGAAAAGACTGGAAAAAGATCAGCTCAGCGGTACGTGGTAAATCGTCAGACATGGTGCGGTCTCTTTACAGTGTGCATAGGACCTTCTTATCTCTTCCTGAACGTCAAGCCACTGCCATTGGATTTATTGCGTTGGTGACTGGCCATCACAATGCTTCAGAAAAATCCACAAGTCATATAGGAGATGATCGAATGATCAGAGCATCTGGGAAGGCAAGGCATCGCGGTGAAGCTATACAGCAGAAAGCAACTGAAAGGCCTGACCTGCATGACCATCATGAAGGAACAATTGCTGGATTTTCATCTTCCTTCAAAAAAAGATACTATGGAGATCTTGTCAGGAATATCCGAAACCATGCTGTTCGAAGGCGTACTCCTCGTATACCGGTCATAGCTCCTGCTGTCAAGAATACCATTGATGAGGCCTCACCTGACAGAAGTTCCAGAATCACTGAAACAAATAAGGCTGGTCAAGATCATATATTCTTGGACACCAAGGCAACTGGAGACTCAGCGATATGTCAGCAACAGTTGAAGAAAACAAGGATTCAGCAACCTACGCAGCAAGGTCAGACCATTAAAGTTGAGCATGAGACAGTGATGGCATCTGATGATGGGAATAAGCTTGTTGATTCACTCAACCAACATCATATTGAGAGAAACATTATTTCTGAAGATGATATGTTGGTCTTAGATGTACTGAATAGTCTGGTGAATGCACCCTCTAAAACGTCCAAACTCGAGATCAAAGTTCCTTCAGGATCTCATGGAAAAACTGACTCTGTGTTATCTGATAGAAGGGAGAAAGGTCAACCTACCATTGATCTATCTAAACTAGGGAAGGCAATTGGTAAATCCAGTGCTTCCAAAACTGGGAAGAAAAGGCATAAGAAGCTATTAGATGCAGAGGTGCCTGCTGAAGCACAAAACATTTCTGTTAATAATTTAGTTCTGCCAGAAGCACCAAAGGTTGGTATCACCGATGATTCCTCCTTGTGGTGTACTGACTCTGCAAGAGTGGGAATACCTGAAGCATCTGAAGATATTTCCACTAAAGCCCCCAGTGCAGCAACAGAAATCAAGCCTGAGATTAGAATGTCTAGAAGGACCAGAAGGAAATACCAAATGCAATGCAAAACGAAGCACGTGTCATGCAATGAAGATTCAGATAATTTACAGGCAAAGAAATTGCTGCACTGTCTGTCATCTGAATCGCTTCGTAGATGGTGCACGTATGAGTGGTTCTATAGTGCAGTTGATTATCCATGGTTCTCAGACAATGAGTTCGTGCACTACCTAAATCATGCAAAATTAAGTCATCTGTCAAGGTTGACTAGATCAGAGTGGAGCGCAATTCGAAGTTCTCTTGGCAAACCCAGGCGATTTTCAGATCATTTTCTGGCTGTGGAAAAGGAAAAACTTGAGGATTATCGAGAGAAAGTAAGGAAAATCTATGCTCAACTCCGTGATGGTTCACGGGATTCTCTACCGGCAGACCTAGCTAGGCCATTTTCAATTGGTCAGGAGGTGATCGTGCGTCATCCAAGTTCTAGAGAACTTTGTGATGGCAAAGTGGTGATGATGGGGCCAGATTGTTACAAGGTCCATTTTGTTAACCCTGACCTTGGTGTTGATATTGTAAAGGACACTGATTGTATGCCAGTTAATTGGTTGTATAATCATCCTGACAACATGAGAAGGAGCTGCCTTTCAAATAATGTGTACAGCATCATGGAGGCGGAGCACATTCCTGACCTTGCACCAAGTGAGAACTGGGACCTTGCTGTACATGGAGTTACTGTAACATCGGATAAACAGCTCAAGGTTGAATCTGGTGTAAATGGTGAAAGGCCACCATACTGGAGCACATCCAATGGCCGTCCTACAAAATCTGGAGGTTGCCCAGACGACGATGCTGGTCACGACGATGAGCTAGAGTCATCTATACTTGCCTTTGTACAAAAATCGCTATCCCAGGCCAGGCAAATGGTTGATGAAGCCATGAAGGCGAACTCTGAAGGTAGTGATGTAAGGGTACGGATGCCAAATCAAGAGACAGATTGTGTGGGCCCACAGTATGAAGCTGCTATTCGTGGTGCCCAACTTCCTTCCAACTTGATCGCTAACTGCATTGCGACAATTCTTTCTATCAAGCGGCTTAGCGACTCGCGGCATCCATTTGCTAGCATAGCAGGTGTCTTGGAGCATGCTTCCTCAATGCTGCGCCCAAGCTGTCCAGAGAACCTTGCAATCTACAAAGACATAGAGACTTATATCTCTGTCATAGCGAACCAGATACTTGCACTTGTGCCAACAGCGTTGGGCAATTGTGGACCTCCCATGTCACCCATGTAA
Protein Sequence:
- >Pavir.5NG035200.1.p|Panicum_virgatum|MYB_related|Pavir.5NG035200.1.p
MAPAKGSRTINKTIIKGYEDQRQYDDPPSSSKAKQKKRKISDLNPKWSKDELTQFYEAYRRHGKDWKKISSAVRGKSSDMVRSLYSVHRTFLSLPERQATAIGFIALVTGHHNASEKSTSHIGDDRMIRASGKARHRGEAIQQKATERPDLHDHHEGTIAGFSSSFKKRYYGDLVRNIRNHAVRRRTPRIPVIAPAVKNTIDEASPDRSSRITETNKAGQDHIFLDTKATGDSAICQQQLKKTRIQQPTQQGQTIKVEHETVMASDDGNKLVDSLNQHHIERNIISEDDMLVLDVLNSLVNAPSKTSKLEIKVPSGSHGKTDSVLSDRREKGQPTIDLSKLGKAIGKSSASKTGKKRHKKLLDAEVPAEAQNISVNNLVLPEAPKVGITDDSSLWCTDSARVGIPEASEDISTKAPSAATEIKPEIRMSRRTRRKYQMQCKTKHVSCNEDSDNLQAKKLLHCLSSESLRRWCTYEWFYSAVDYPWFSDNEFVHYLNHAKLSHLSRLTRSEWSAIRSSLGKPRRFSDHFLAVEKEKLEDYREKVRKIYAQLRDGSRDSLPADLARPFSIGQEVIVRHPSSRELCDGKVVMMGPDCYKVHFVNPDLGVDIVKDTDCMPVNWLYNHPDNMRRSCLSNNVYSIMEAEHIPDLAPSENWDLAVHGVTVTSDKQLKVESGVNGERPPYWSTSNGRPTKSGGCPDDDAGHDDELESSILAFVQKSLSQARQMVDEAMKANSEGSDVRVRMPNQETDCVGPQYEAAIRGAQLPSNLIANCIATILSIKRLSDSRHPFASIAGVLEHASSMLRPSCPENLAIYKDIETYISVIANQILALVPTALGNCGPPMSPM*