Information report for Pavir.3KG124100.1.p
Gene Details
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Functional Annotation
- Refseq: XP_025807435.1 — uncharacterized protein LOC112885940 isoform X1
- Refseq: XP_025807437.1 — uncharacterized protein LOC112885940 isoform X1
- Refseq: XP_025807438.1 — uncharacterized protein LOC112885940 isoform X1
- TrEMBL: A0A3L6STJ3 — A0A3L6STJ3_PANMI; Uncharacterized protein
- STRING: Si020953m — (Setaria italica)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Pavir.3KG124100.1.p|Panicum_virgatum|MYB_related|Pavir.3KG124100.1.p
ATGCCTCCGCCGCCGCCGGATCGGAGGGACTTTCTGTACAGGGAGGGCCGCAGGCACGACGGCGGCGGCGGGGGCGACCCGCTCCTGCCGCCCGCCCCCACGCCGCCCCGCTGGCGGGACTCGCCCTACCACCCGCCGCCGCCGCCGCCGCCCCTGCGGGACCACTCGCGGCCCTCGCCGCGCCGGGCGCCGCAGTCGGGCTCCTCAGGTAGGCCCGCCCCCCTCAAATCCTCAGATCTGAGGCGGCCGCCGCCTCGGTGGCCCTCTTCGGCGCCCCTAATTTCCCCGAACCGCTCTGCTATTTCAGAAGGTTACTACCGACAGGGCGGCGGCGCGTACGACCGCTCCTGCCCTGATGAGCCGCCGATAGGCTACACGCCATCGCGCTCAGACCGGTACTGGACGGAAGATGACGGCGGAGGATACAAGGGCTTCGGCCGTTACGGCGGCGGCGGCGGCGGCCGGAGGGACGGCCGTGACATGAGGGGGTCTTACCGAAGGTCGCCGTTCAGGGGCTATGGAAGCGACTTCTCCAGGAACCATCCGGAGCAGCCCCCTCCGCCACCGCCGAGGAGGTCTCCGTTGAGGTCTGTCGCTGTTCCGATCTGCTATGACCCTCCAGGCAATAGAGTTGACAGGGGGGATAGGGACAACCTCCCACGGGTGACACCATGGCGGAGGAGGGAGAGCAGATCTGAGGTTGCGGGTGCTGCTGGGGCTGGACCTGGACCTGTGTCTGTTGGCCAGACCACTCGGCCGGCGCCCTCAGAGAAGGAGGCTTCAGCTCAGCCTCTGGCTGGGGCAGCTCCTCACGGGGCTGATGAGGAGGCGCCAAGGAAGAAGGCTCGACTTGGATGGGGCCAAGGTTTGGCCAAGTATGAGAAGCAGAAGGTGCAAGTCCCTGCAGATCTTGCTGAAGCTGTTGCTGATGGGAGCCCAGCTGATACTGAACAGAAGACTGCTTTTCCTGTGCCTCCGCCTGAGCCGCCTGCTGCGCCTGCTCCTCCACCTGAACCTCCTGCTGCACCTGCGCCTCCACCTCCGCCTGAGCCTCCTGCTGAGCCTGCACCTGAGCCTCCTGCGCCTGCGTCTGTGCCGCCTGCTGCCCCTGCCCCTGCCCCTGCTGCTGTGTGTGTGCCTGCCCCTGTATCTGCACCTTCACCTGCGCCTTGCATATCTCCAGTTGATGCACCATCATCTGCAGCACCATTTTGTACCCCAGCGCCTGAAGATAAATCATGTGAACAGACGGCAAATATGGTCATAAACCCTACTAAAGATGTCCCTGAAGCTGGTGATAAAACTTTCAGCAATGAATTCTCCATTAAGTTAGATCAGCTGGCTGATGATCCTATTAATTCCATTGCAAACATGCTTGCTGACCTTCTCCAACATGATGATTCTTGCTCTGGGGATTCAAAAGGGCAAACCAGTGCAAGTAAGCTGCTGCTACTGAAGGAAAGTATTTCCAAGGAGATTGAAAAGACCGAACTCGAGATTGATTTGATGGAAGGTGAACTTAAATCTGTGAGTACTAAGGCCGGAACAGCTGTTGAGGGTTCTCCCACAGGTGTCACATATGCAGAAAATATTTCACCTTCTAGTGGGACATCAAAGGTCCCTTTAAGTGTGGAGATCTCTGAAACGTCTCATGTGATGAAAGAACCGGGGGAGCTCATCAGCTCTCCTAAGCCACCTGTGGTGCAGGATGTTGATGCCAAAGGTTCTGACATGATGGAAATTGAGAATGCTGCAGTTTGTAATGCAAAAACAGTTTCTTCAGAAGAGAGTGCTGTATCTCCTGTGGTCGCAGAGGATCTGGCCTGTGCTGCTGCTGATCTTAGCCCATTGAAAGCTTCTGAAGGATCTGGGTTTCAAATTGATATGCACAATGACAGGGTAGAAACTTCTCCATGCCATGATAATGCTGATTCCATCAAAACAGAAGTTAGTGACGACCCACCAGTGAGGCAATGCTCACACCATGATCATAAGTATAGCTTAATTGGGTCGGTTACATCTGCCAATAATAATATAGCCAAAGTAATGAATGAATCGTTATTTAAATCCTTGCCTGCTGATACACTTCGGCTTGATTTAGTGGCATCAAGTCATCTTCTGAGCCAAAGGAAGAATGACCATCATATCAAAGAAAGGCTTGGAGTATTTAAAAATAGGCTGAGGTTGAAAGAGCAGATTCTTACCTTAAAGTTCAAAGCATATCGTCACTTGTGGAAAGAGGATCTGCGACTACTTTCTGCAAAGAAACAATGCTCCAAGTCTAACAAGCGCACTGATCAGAGCAACCGGGCATCACATATTGGATCTCAGAGGCAACGCTCCTCCAACCGTTCACGATTGTCCATGCCTGCTGGTAATTTAAGTACATTCTTAACTCCAGAAATGTCAGATGTTGCCAGCAAGTTGTTTTCAGAATTTCAGATTAAGCGCTGCAGAAACTACCTGAAAATGCCAGCACTGATTATAGATGAGAGAGAGAAGGAATGCTTGAGGTTTGCCAGCAAGAATAGCTTGGTTGATGATCCTGTTTTAGTTGAGAAGGAGCGGGTAATGATAAATCCATGGACACAAGAAGAAAAGGAAATATTTATGGAGATGCTTGCTAAATTTGGCAAGGATTTCTCCAAAATCTCCAGTTTCCTTATGCACAAAACTACTGCTGATTGTGTAGAGTTCTACTACAAGCATCATAAATCAGACAGTTTCCGAGAAGTCAAGAAACTTTTGGACCTTCGTCAACATCAACCCGCTGGCAATTTTCTGGGAGCGAAATCTGGAAAGAAGTGGAATCCTGAGGCAAACGCTGCTAGCCTTGATATGCTTGGAGTAGCATCAGTAGTAGCAGCCCATGACCTTGAATATGCAAACAGAGTGGAGAAAGTCTCTGCGAAATCCCTCATCCGAGCATATGGATCCAATGTTTCTTTTGCAGCCAAAAAATCTTCTGACAGGGAATGCATTAATAATGTACCTTTGAATGAGAGGGAATCTGTTGCTGCTGATGTATTAGCAGGCATATGTGGCACTCTCTCTCCTGAGGGAATGGGCTCATGCATTACTAGTTCTGCTGATCTTGGTAAGATTAACATGACAAGAATGGAGCATATCTTAGCCCCTGAATTTGACAGAAGCATTGATGATGAAGATTTGCTGTCAGATCACGAGTGTGAAGTTGATCCAGTTGATTGGAATGATAATGAGAAGTCAATTTTCATTGAGGCTATGAACAACTACGGAAAGGACTTCGCTCGGATTTCATCATGCGTGAAAAGCAAGTCGTATGAGCAGTGCAAAGTATTCTTCAGCAAGGCTCGGAAATCACTTGGTTTGGATTTGATCCATCAAGGAGCAGTTGATGTTAGTATGCCAACTAGTGATACAAATGGAGGGAGGAGTGATACTGATGAGGCCTGTGCTGCTGAAATGGATTCAGCTATCTGTAGCACGCAGTCATGTTCAAAAATTGAGATGGATGTATGCCCTACTGAAAAAGGCATGGGAGATATAGTCACTAAGCAGCCAGAACTTAATATATCAAATGGGTTTGATGTTATGAACGGTAAAACTGGGGATGATAAGGAGAAAGCTGATAAAAATTGTGGTATTGTTGATCATGAAAGGTTCGTTGAAGGTACTCATCAAGCAGCATGTGGTCCTATAGACATCAATTGTCCAGAAAGGACAGAGAAGCTGCATGGAAAAGATGATGTCGTCGACCAAGTAAATATGCACAACAATAGTGCCATCAGCTCCTCGACTGAGCAAGCAAAGGCAATGCACTCAGAAGTCCGATCCTGTTTACATTCTGTTGAGGTACTTCATCAATCAAGCAAAGCCCCTTTGGAGACTGGCACTGATGCTTCCCGGATGGAAGAATGTTCAAACAATGGTCTTGACAATAATCTAATGAAAGCTGAAAATTCTGGCGCCTCATCTTGCATAGCTTCAGATACCTGTATTAGGGACAATGTTCACTTTGCAAACATGACTGGCGCTTCCACCATTAGTCCTACATTCGCTTCAAGTTATAAGCATTCTGTGTCAGCAGATGTGCCCCAGACAAAGCCAAAGCCAAAGCCACTGGTTACTCCCCTTACCCCAAAGGATTTAATGCCTGTGCAGTTCAGTTCTGCAATTCCTGATCCTACCGCAATTTGTTTTGATGGCATAGCATCAATAACTATGCCCAATTTTGAGGACAGTGGTAACAGAGTCAGCAGTTCTTTAGGGCCCAAAGATATGAGCAAGTACCCAGCTTTTAAAGACCCAACTGGTAATCAGCATGTCACATTGTTTCGTAATGGTGATGGTTACACGAACTGTCTGACAACTGAATTACCAATTTTTTCTGAAAGACCTGCAAGTGCAACTGTTGGTACTTCTCAGACTGATCGGTTCACTCTAACAAAATTCCAGAATGGTCGGTCCAGCACTTTGGGCCTTCCAAACACTTCCGATGGGATTCAATGGGCCAGAAAACATGAAGAAGTACTGCAAGGTTCTCTGAGGTTATGCTCTCACAATACAAGTTCTGATGGTGATGAGCAACAAAAGCGGCATGGTGATGTCAAGTTATTTGGGAAGATTCTCAGTCATCAATCATCCTTGCAAAGTCCTGTCTCATCATGTAATGGTAACAAGAGCAAGCCTCCCTCGCCAAAAGTTGACATGTCATCTGTGAGATTGTCAAACAATCCAAGGGATCGTGTGGTTTGTTCTTCCAAGCCTGGCATCACTCATTTGGGTCTGGAGGAAAGAACAGTTCGGAGCTATGGCCATTTGGATGCAAGCACGACACAGCCAGAACCACTGCTAATGATGGCGAAGTGCCAGAGCCTAGCCGGTGTACCGTTTTACTCGGCTAAAAATGGCACTGTTGGTGTGTTTTCAGATTATCAACAGCCTTCGATTCAGCCACATCAATCAGATCCAAAACGGCTGGAAAGGTTTTCTGATGCTCAGAAGCGCAACGGAATGGAGTTCATTTCGGGTTTCCAGCAGCCTGGTAAAATCTCACGGTTTGGGGGTGCTGGTATCCTTGTAAGCGGGGTCTCAGATCCTGTGGCTGCTCTCAAGGCTCAGTATGGTCCCAGTTCAAAGGTTATGGGCAGTGACGTGGATCCTTGGAAAGACATAGGAAGCAGCTCCATACCCTTTGCTAGCTTGACCTGTCAACAGTGGCACAGTGCTGTAGGTTCGCTAGAGGTGCTGTCCACAGGCTGA
Protein Sequence:
- >Pavir.3KG124100.1.p|Panicum_virgatum|MYB_related|Pavir.3KG124100.1.p
MPPPPPDRRDFLYREGRRHDGGGGGDPLLPPAPTPPRWRDSPYHPPPPPPPLRDHSRPSPRRAPQSGSSGRPAPLKSSDLRRPPPRWPSSAPLISPNRSAISEGYYRQGGGAYDRSCPDEPPIGYTPSRSDRYWTEDDGGGYKGFGRYGGGGGGRRDGRDMRGSYRRSPFRGYGSDFSRNHPEQPPPPPPRRSPLRSVAVPICYDPPGNRVDRGDRDNLPRVTPWRRRESRSEVAGAAGAGPGPVSVGQTTRPAPSEKEASAQPLAGAAPHGADEEAPRKKARLGWGQGLAKYEKQKVQVPADLAEAVADGSPADTEQKTAFPVPPPEPPAAPAPPPEPPAAPAPPPPPEPPAEPAPEPPAPASVPPAAPAPAPAAVCVPAPVSAPSPAPCISPVDAPSSAAPFCTPAPEDKSCEQTANMVINPTKDVPEAGDKTFSNEFSIKLDQLADDPINSIANMLADLLQHDDSCSGDSKGQTSASKLLLLKESISKEIEKTELEIDLMEGELKSVSTKAGTAVEGSPTGVTYAENISPSSGTSKVPLSVEISETSHVMKEPGELISSPKPPVVQDVDAKGSDMMEIENAAVCNAKTVSSEESAVSPVVAEDLACAAADLSPLKASEGSGFQIDMHNDRVETSPCHDNADSIKTEVSDDPPVRQCSHHDHKYSLIGSVTSANNNIAKVMNESLFKSLPADTLRLDLVASSHLLSQRKNDHHIKERLGVFKNRLRLKEQILTLKFKAYRHLWKEDLRLLSAKKQCSKSNKRTDQSNRASHIGSQRQRSSNRSRLSMPAGNLSTFLTPEMSDVASKLFSEFQIKRCRNYLKMPALIIDEREKECLRFASKNSLVDDPVLVEKERVMINPWTQEEKEIFMEMLAKFGKDFSKISSFLMHKTTADCVEFYYKHHKSDSFREVKKLLDLRQHQPAGNFLGAKSGKKWNPEANAASLDMLGVASVVAAHDLEYANRVEKVSAKSLIRAYGSNVSFAAKKSSDRECINNVPLNERESVAADVLAGICGTLSPEGMGSCITSSADLGKINMTRMEHILAPEFDRSIDDEDLLSDHECEVDPVDWNDNEKSIFIEAMNNYGKDFARISSCVKSKSYEQCKVFFSKARKSLGLDLIHQGAVDVSMPTSDTNGGRSDTDEACAAEMDSAICSTQSCSKIEMDVCPTEKGMGDIVTKQPELNISNGFDVMNGKTGDDKEKADKNCGIVDHERFVEGTHQAACGPIDINCPERTEKLHGKDDVVDQVNMHNNSAISSSTEQAKAMHSEVRSCLHSVEVLHQSSKAPLETGTDASRMEECSNNGLDNNLMKAENSGASSCIASDTCIRDNVHFANMTGASTISPTFASSYKHSVSADVPQTKPKPKPLVTPLTPKDLMPVQFSSAIPDPTAICFDGIASITMPNFEDSGNRVSSSLGPKDMSKYPAFKDPTGNQHVTLFRNGDGYTNCLTTELPIFSERPASATVGTSQTDRFTLTKFQNGRSSTLGLPNTSDGIQWARKHEEVLQGSLRLCSHNTSSDGDEQQKRHGDVKLFGKILSHQSSLQSPVSSCNGNKSKPPSPKVDMSSVRLSNNPRDRVVCSSKPGITHLGLEERTVRSYGHLDASTTQPEPLLMMAKCQSLAGVPFYSAKNGTVGVFSDYQQPSIQPHQSDPKRLERFSDAQKRNGMEFISGFQQPGKISRFGGAGILVSGVSDPVAALKAQYGPSSKVMGSDVDPWKDIGSSSIPFASLTCQQWHSAVGSLEVLSTG*