Information report for Pavir.1NG308200.1.p
Gene Details
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Functional Annotation
- Refseq: XP_025812020.1 — nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
- TrEMBL: A0A3L6QE20 — A0A3L6QE20_PANMI; Nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
- STRING: Pavir.Aa01714.1.p — (Panicum virgatum)
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Pavir.1NG308200.1.p|Panicum_virgatum|MYB_related|Pavir.1NG308200.1.p
ATGGCGGCTGCGGCGGCGCCGGCGGCGGGGACGGGGAAGGGGAAGCGGAAGCGCGCTCTCTCCGAGGACGACGTCTACCTCCTCCTCCACAGGTACGCGCCCGGGACGATCCTGACGGCGCTGCAGGAGGTGGCGCAGCACGCGGAGGGCAGGCGCATCGACTGGAGGGCGGTGGTGAGGAAGTCCGCCACGGGGATCACCTCCGCGCGCGAGTACCAGATGCTCTGGCGCCACTTCGCTTACAACCACGACCTCGACGAGACCGTCGGCGCCGGCGACCAGCCTCTGGGAGATGACAGTGACCTGGAATTGGAGCTTGAACCAGTTCCTAACCCGACCAAGGAAGCTTTATCTGAGGCCTCTGCATTAGCCAAGGCACTAATATCCGGATCTTCACGTGAGCAAGCCTCTGGTCAACGTGTTAATTTGGATGCTCCTGTGCTGAACGCCCCAAATGAAAAGACAGTGCGGATTCCATCTGAGAAACAGCTTGCTCAGAATCATCGTATAACAAACGTTACTGGTCCTGTTTCCAACTCAAAACAGGCATCCCATTTAGGGCCCTCTCCTGGTTCTTTGGATCCAAATGGACCTTCGAAAAAGAAAAAGAAGCCTAAAGCATGGTCTAAAGAGGAGGATGCAGACCTAGCAACTGGTGTACAGAAGTATGGTGAAGGAAATTGGGATTATATTTTACATAAATGTAAATTTGATAATACAAGGACACCTGATCAGTTGTCTCAGAGATGGGCACTAATTTGCAAGCGTCCAGGAGGATCAACCAAGCCTGCTAGCACTAAACATGCCACTATCGCTAGCTCAGAGGCACTTTCAATTGCTAGACAGGATGCTCTTAAGGCACTTTCAATTGCTGTTGGTCCTATGCGTAGATCATCTATGCTAAGACCAGGAGCTCAGCAACTAGGCATTCAGCATAAGTCTGCAGTGTTTGCTCCTAAGATACCTAAAGTAAGATCCGCAGCAGCCCCTTCACCAGCACTGGCACTGCCGGTCCCAGTGCCAGTTCCCATGCCTGTGAAAGTACCAGTCAAGTCGCCACTTCCTCAGGAGCAACAAGCACCTGTGCAACGTGCACCTCCAAAATCGGCAAATGCTTCAAATAAGACTCGTAAGAAGCAATCTCCCCAACCAAGTCCGATCATTGGTCCTTCCTCAATACAAGCAGCAGCTATTGCTGCTGGTGGACGAATCGCCCCAGCCTTAGCGGCCGCAAACTTCTTAAAAGTCGCACAGTCTGTGCACATAAGATCTCAAGTAACAGCGTCTTCAAAACCTTGTGCAAGCACTAAAGCACCGAGTGTGGTTGTTGAACCTGGTACAGAAACGGGCAGCACTCTGCATCTAGAACCTCTTAACACTAGTGCCCCTAAGTCTGGTCCTTCAGTTTTGACCACACATGCAACTGAGCAAGTTCATGGTGCTTCAGAGGTTGCCGTCGTTAATCCTGCAGGGCCATCTGCCGTGGCACATCCGTTGGAAACTAATAAAGCATTGAGTACCACACCAGTGCCTGTCTCATGTGACAGCGAGGAAAAGGAGGGCGACTCCACATTTTGTGTTATTACTATAGATGACTTGTTCCCTGAAGATGCAATGCAGCTAGAAACAGTGGATCTCGAGGCAAAGCCAGAAATTGCCCATCAGGAGGCAAAGCAGCCGGAAACTGTGGATCCTGTGGATCCCAAGGCAAAGCAGCCAGAAGCTGCAGATCCCAAGGCAAAGCAGCCAGAAACTGCAGATCCCAAGGCAAAGCAGCTGGAAACTGCGGATCCCAAGGCCAAGCAGCTAGATACATTAAATCCCAAGGTTGAGATAGTAGATCCCAAGGATAAAGACATGCTTGAGTTTGATCAATATGTTGCTTCTCAAGGAGCTGTAAACACAGATCATTTGGATAAAAGCAAGACTGGCAGAAGTTCTTCGCAACCCCAAGGCCTTGTTGGCAGCCAGAAGAAGCAAGCGAAACTGGTGCCCGCCGTAGGGAAAGGCAACCCTGTATCAGCTGGTGTGCCAACAACCGTGAAGAGAACCAAAACTTCTGTCCCACATTTAGTGAACCCAGTCCCAGCTGGGAGCCCCCGTGGCATTGTTGGCACAGTCAATGCGAATGCACCGAATAAGACACTAGTAAGGAAGGCAACTATTCTTGTTCCTGCTGGTGTTCAAGCCCCTCTGCTGAAGAAGCATGCCACGAACGGAAAAGGCACCCAAGTGATGCAACCCAACACTGGCAATGGAGTACCACCGGCCAGCAGCCAGGCTAGCGTGGCCGTGAATGGTGCTAGCAAGGTGAATCCGCCATCCAGCAGCGGCCAGGCGAGTTCGGTGGTGAATATTGGTAGCAGAGCGAACCCACCATCCAGTGGCCAGGCTAGCGCAGTGGTGAATATTGGTAGCAAGGCAAATCCACCATCCAGCGGCCAGGCTAGTGTGGTGGTGAATGGTGCTAACAGAGCGGCCAATACACCTTCCAGCGGCAAGGCTAGCGCAGCCTTGAGTGGTGCTGCGAACAAGGCGAATCCACCAGCTGCACCCAAGCAATAG
Protein Sequence:
- >Pavir.1NG308200.1.p|Panicum_virgatum|MYB_related|Pavir.1NG308200.1.p
MAAAAAPAAGTGKGKRKRALSEDDVYLLLHRYAPGTILTALQEVAQHAEGRRIDWRAVVRKSATGITSAREYQMLWRHFAYNHDLDETVGAGDQPLGDDSDLELELEPVPNPTKEALSEASALAKALISGSSREQASGQRVNLDAPVLNAPNEKTVRIPSEKQLAQNHRITNVTGPVSNSKQASHLGPSPGSLDPNGPSKKKKKPKAWSKEEDADLATGVQKYGEGNWDYILHKCKFDNTRTPDQLSQRWALICKRPGGSTKPASTKHATIASSEALSIARQDALKALSIAVGPMRRSSMLRPGAQQLGIQHKSAVFAPKIPKVRSAAAPSPALALPVPVPVPMPVKVPVKSPLPQEQQAPVQRAPPKSANASNKTRKKQSPQPSPIIGPSSIQAAAIAAGGRIAPALAAANFLKVAQSVHIRSQVTASSKPCASTKAPSVVVEPGTETGSTLHLEPLNTSAPKSGPSVLTTHATEQVHGASEVAVVNPAGPSAVAHPLETNKALSTTPVPVSCDSEEKEGDSTFCVITIDDLFPEDAMQLETVDLEAKPEIAHQEAKQPETVDPVDPKAKQPEAADPKAKQPETADPKAKQLETADPKAKQLDTLNPKVEIVDPKDKDMLEFDQYVASQGAVNTDHLDKSKTGRSSSQPQGLVGSQKKQAKLVPAVGKGNPVSAGVPTTVKRTKTSVPHLVNPVPAGSPRGIVGTVNANAPNKTLVRKATILVPAGVQAPLLKKHATNGKGTQVMQPNTGNGVPPASSQASVAVNGASKVNPPSSSGQASSVVNIGSRANPPSSGQASAVVNIGSKANPPSSGQASVVVNGANRAANTPSSGKASAALSGAANKANPPAAPKQ*