Information report for Pahal.E04305.1
Gene Details
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Functional Annotation
- Refseq: XP_025816481.1 — protein ALWAYS EARLY 3-like
- TrEMBL: A0A2S3HYQ7 — A0A2S3HYQ7_9POAL; Uncharacterized protein
- STRING: Pavir.J02622.1.p — (Panicum virgatum)
- GO:0005654 — Cellular Component — nucleoplasm
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Hordeum vulgare: MLOC_36343.2, MLOC_36343.1
- Oryza sativa: OsALYL1
- Panicum virgatum: Pavir.5KG052000.1.p, Pavir.5KG052000.2.p, Pavir.5NG035200.1.p
- Setaria italica: Seita.5G136900.3.p, Seita.5G136900.2.p, Seita.5G136900.1.p, Seita.9G308900.2.p, Seita.9G308900.1.p
- Setaria viridis: Sevir.5G135000.2.p, Sevir.5G135000.1.p, Sevir.9G314300.3.p, Sevir.9G314300.1.p, Sevir.9G314300.2.p
- Zea mays: GRMZM2G468479_P01, GRMZM2G395749_P01
Sequences
CDS Sequence:
- >Pahal.E04305.1|Panicum_hallii|MYB_related|Pahal.E04305.1
ATGGCCCCAGCAAAAGGTTCTCGAACTATTAACAAGACCATAATAAAAGGATATGAGGATCAACAGCAGTACGACGATCCACCTAGTTCAAGCAAAGCTAAACAAAAAAAGAGGAAAATTTCAGACTTAGATCCCAAATGGAGCAAGGATGAGCTTACACACTTTTATGAAGCCTACCGCCAACACGGAAAAGACTGGAAAAAGATCAGCTTAGCGGTAGGCGGTAAATCGTCAGACATGGTGCGATCTCTTTACAGTGTACATCGGACTTTCTTATCTCTTCCTGAACGTCAAGCCACTGCCATGGGATTTATTGCGTTGGTGACTGGTCATCACAATGCTTCAGAAAAATCCACAAGTCATATAGGAGATTATCAAATGGTGAGAGCATCTGGGAAGGCAAGGCGACGCGGTGAAGCTACACAACAGAAAGCAACTGAAAGGCCTGACCTGCATGACCATCATGAAGGAACAATTTCTGGATTTTCATCTTCCTTCAAAAAACGATACTATGGAGATTTTGTCAGGAATAGCCGAAACCATGCTGTTCGAAGGCGTACTCCTCGTATACCAGTCATAGCTCCTGCAGTCAGGAATACCATTGATGAGGCCTCACCAGGTATTGAAAACATCATCAATACTACCAAGAGAAAATATGAAGCGGCCAATAAAGATTGTGCTATCGTTCCAACGAATAAGTGCTCTCCAGACAGAAGTTCCGGAATCAATGAAACAAATAAGGCTGGTCAAGATCATACATTCTTGGACACCAAGGCAACTGGAGACACAGCGATATGTCAGAAACAGTTGAAGAAAACAAGGATTCAGCAACCTACAGAGGATGGTCAGACCGGTAAAGTTGAGCATGAGACAGTGATGGCATCTGATGAAGGGAATAAGCTTGTTGATTCACTCAACCAACATCATATTCATAGCAACATTATTTCTGAAGATGATATGTTGGTCTTAGATGTACTGAATAGTCTGGTGAATGCACCCTCTAAAATGTCAAAACTCGAGATCGGTGCTCCTTCAGGATCTCATGGAAAAACTGACTCTGTGTTATCTGATAGAAGGGACAAAGGTCACCCTACCACTGATCTATCTAAACAAGGGAAGGCAATTGGTAAATCCGGTGCTTCCAAGACTGGGAAGAAAAGGCATAAGAAGCTATTAGGTGCAGAGGTGCTTGCTGAAGCACAAAACATTTCTGTTAATAATTTGGTTCTGCCAGAAGTACCAAGGGTTGGTATCACTGCTGATTCCTCCTTGTGTACTGACTCTGCAAAAGTGGGGATACCTGAAGCATCTGAAGATATTTCCACTAAAGGCCCCAGTGTAACAACAGAAATCAAATCTGAGATTAGAATGTCTAGAAGGACCAGAAGGAAACACCAAATGCAATGCAAAACAAAGCATGTGTCATGCAATGAAGATTCAGATAATTTACAGGCAAAGAAATTGCTGCACTGTCTGTCATCTGAATCGCTTCGTAGATGGTGCACGTACGAGTGGTTCTATAGTGCAGTTGATTATCCATGGTTTTCGGATAATGAGTTTGTGCACTACTTGGATCATGCAAAATTAAGTCATTTGTCAAGGTTGACTAGATCAGAGTGGAGCGCAATTCGAAGTTCCCTTGGCAAACCCAGGCGATTTTCGGATCATTTTCTGGCTGTGGAAAAGGAAAAACTTGAGGATTATCGAGAGAAAGTAAGGAAAATCTATGCTCAACTCCGTGATGGTTCACGGGATTCTCTACCGGCAGACCTAGCTAGGCCATTTTCAATTGGTCAGGAGGTGATTGTTCGTCATCCAAGTTCTAGAGAACTTTGTGATGGCAAAGTGGTGATGATGGGGCCAGATTGTTACAAGGTCCATTTTGTTAACCCTGACCTTGGTGTTGATATTGTAAAGGACACTGATTGTATGCCAGTTAATTGGTTGTATAATCGTCCTGACAACATGAGGAGGAGTTGCCTTTCAAATAATGTGTACAGCATCCTGGAGACGGAGCACATTCCTGACCTTGCACCAAGTGAGAACTGGGACCGTGCTGTACATGGAGTTACTGTAACGTCAGATAAACAGCTCAAGGTTGAATCTGTTGTCAATGGTGAAAGGCCATCATATTGGAGTACATCCGATGGCCACCCTACAAAATCTAGAGGTCGCCCAGACAACAATGCTGGTCACAACTATGAGCTAGAGTCATATATAGCTGCCTTTGTACAAAAATCGCTATCCCGAGCCAGGCAGATGGTTGACGAAGCCATGCAGGCGAACTCTGAAGGTAGTGATGTAAGGGTTTGGATGCCAAATCAAGAGACAGATTGTGTGGGCCCACAATCTGAAGCTGCGGTTCGTGGTGCCCAACTTCCTTCCAGCCTGATATCGAACTGCATTGCGACAGTTCTTTCAATCAAGCGCCTTAGCGACTCGCGGCATCCACCTGCTAACATAGCAGGTGTCTTGGAGCGTGCTTCCTCAATGCTGCGCCCAAGCTGTCCAGAGAACCTTGCAATCTACAAAGACATAGAGACTTATCTCTCTGTCATAGCAAACCAGATACTTGCACTTGTGCCAACAGCGTTGGGCAACTGTGGACCTCCCATGTCACCCATGTCACCCAGATAG
Protein Sequence:
- >Pahal.E04305.1|Panicum_hallii|MYB_related|Pahal.E04305.1
MAPAKGSRTINKTIIKGYEDQQQYDDPPSSSKAKQKKRKISDLDPKWSKDELTHFYEAYRQHGKDWKKISLAVGGKSSDMVRSLYSVHRTFLSLPERQATAMGFIALVTGHHNASEKSTSHIGDYQMVRASGKARRRGEATQQKATERPDLHDHHEGTISGFSSSFKKRYYGDFVRNSRNHAVRRRTPRIPVIAPAVRNTIDEASPGIENIINTTKRKYEAANKDCAIVPTNKCSPDRSSGINETNKAGQDHTFLDTKATGDTAICQKQLKKTRIQQPTEDGQTGKVEHETVMASDEGNKLVDSLNQHHIHSNIISEDDMLVLDVLNSLVNAPSKMSKLEIGAPSGSHGKTDSVLSDRRDKGHPTTDLSKQGKAIGKSGASKTGKKRHKKLLGAEVLAEAQNISVNNLVLPEVPRVGITADSSLCTDSAKVGIPEASEDISTKGPSVTTEIKSEIRMSRRTRRKHQMQCKTKHVSCNEDSDNLQAKKLLHCLSSESLRRWCTYEWFYSAVDYPWFSDNEFVHYLDHAKLSHLSRLTRSEWSAIRSSLGKPRRFSDHFLAVEKEKLEDYREKVRKIYAQLRDGSRDSLPADLARPFSIGQEVIVRHPSSRELCDGKVVMMGPDCYKVHFVNPDLGVDIVKDTDCMPVNWLYNRPDNMRRSCLSNNVYSILETEHIPDLAPSENWDRAVHGVTVTSDKQLKVESVVNGERPSYWSTSDGHPTKSRGRPDNNAGHNYELESYIAAFVQKSLSRARQMVDEAMQANSEGSDVRVWMPNQETDCVGPQSEAAVRGAQLPSSLISNCIATVLSIKRLSDSRHPPANIAGVLERASSMLRPSCPENLAIYKDIETYLSVIANQILALVPTALGNCGPPMSPMSPR*