Information report for Pahal.C01181.2
Gene Details
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Functional Annotation
- Refseq: XP_025807439.1 — uncharacterized protein LOC112885940 isoform X2
- TrEMBL: A0A2S3H7M3 — A0A2S3H7M3_9POAL; Uncharacterized protein
- STRING: Si020953m — (Setaria italica)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Panicum virgatum: Pavir.7NG164300.1.p, Pavir.3KG124100.1.p
- Setaria italica: Seita.3G048100.2.p, Seita.3G048100.1.p, Seita.3G048100.3.p
Sequences
CDS Sequence:
- >Pahal.C01181.2|Panicum_hallii|MYB_related|Pahal.C01181.2
ATGCCTCCGCCGCCGCCGGATCGGAGGGACTATCTGTACAGGGAGGGCCGCAGGCACGACGGCGGCGGCGGGGGCGACCCACTCCTGCCGCCTGCCCCCACGCCGCCCCGCTGGCGGGACTCGCCGTACCACCCGCCGCCGCCGCCGCCCCTGCGGGACCACGCGCGGCCCTCGCCGCGCCGGGCGCCGCCGTCGGCCTCCTCAGAAGGTTACTACCGACAGGCCGGCGGCGCGTACGACCGCTCCTACCCTGATGAGCCGCCGCTCGGCTACACGCCGTCGCGCTCAGACCGGTACTGGACGGAAGACGACGGCGGGGGATACAAGGGCTTCGGCCGGTATGGCGGCGGCGGCGGCCGGAGGGACGGCCGTGACATCAGGGGCTCTTACCGAAGGTCGCCGTTCAGGGGCTATGGAAGTGACTTCTCCAGGAACCATCCGGAGCAGCCCCCTCCGCCACCGCCGAGGAGGTCCCCGTTGAGGTCAGTCGCTGTTCCGATCTGCTATGACCCTCCAGGCAATAGAGTTGACAAGGGGGATAGGGACAACCTCCCACGGGTGACACCATGGCGGAGGAGGGAGAGCAGATCTGAGGTTGCGGATGCTGCTGGGGCTGGACCTGTGTCTGTTGGCCAGACCACTCGGTCGGCGCCCTCAGAGAAGGAGGCTTCAGCTCAGCCTCCAGCTGGGGCAGCTCCTCACGGGGCTGATGAGGAGGCGCCAAGGAAGAAGGCTCGACTTGGATGGGGGCAAGGTTTGGCCAAGTATGAGAAGCAGAAGGTGCAAGGCCCTGCAGATCTTGCTGAAGCTGTTGCTGATGGGAGCCCAGCTGATTCTGAACAGAAGGCTGCTTTTCCTGTGCCTCCGCCTCCGCCTGAGCCGCCTGCTGCGCCTGCTCCTCTGCCTGAGCCGCCTGCTGCGCCTGCTCCTCCGCCTGAGCCGCCTGCTGCACCGGCGCCTCCACCTCCGCCTGCACCTCCTGCTGCGCCTGCACCTCCTGCTACTCCTGCACCTGAGCCTCTTGCGCCCGTGCAACCTGCTGCACCTGTGCCTGCTGCTGTGTACGTGCCTGCCCCTGTATCTGCACCTTCACCTGCGCGCTGCCCATCTCCAGTTGATGCACCATCATCTGCAGCACCATTTTGTACCTCAGCGCCTGAAGATAAATCATATGAACAGATGGCACATATGGCCATACACCCTACTAAAGATGTACCTGAAGCTGGTGATAAAACTTTCAACACTGAGTTCTCCATTAAGTTTGATCAGCTGGGTAGTGATCCTATTAATTCCCTTGCAAACATGCTTGCTGACCTTCTCCAACATGATGATTCTTGCTCTGGGGATTCAAAAGGGCCAACCAATGCAAGTAAGCTGCTGCTACTGAAGGAAAGCATTTCCAAGGAGATTGAAAAGACTGAACTCGAGATTGATTTGTTGGAAGGTGAACTTAAATCTGTGAGTACTAAGGCTGGAACAGCTGTTGAGGGTTCTCCCACAGGTGTCACATATGCAGAAATTCTTTCACCTTCTAGTGGGACATCAAAGGTCCCTGTATGTGTGGAGATCTCTGAAACATCTCATGTGATGAAAGAACCAGTGGAGCTCATCAGTTCTCCTAAGCCACCTGTGGTGCAGGATGCTAATGCCAAAGGTTCTGATATGATGGAAATTGAGAATGCTCCAGTTCGTAATGCGAAAACAGTTTCTTCAGAAGAGAGTGCTGTATCTCCTGTAGTTGCAGAGGGTCCGGCTTGTGCAGCTGCTGATCTTAGCCCATTGAAAGCTTCTGAAGGAGCTGGGTCTCAAATTGATATGGACAATGACAGGCTGGAAACTTCTCCATGCCATGATAATGCTGATTCCATCAAAACAGAAGTTAGTGATGACCCACCAGTGAGGCAATGCTCACACCATGATCATAAGTATAGTTTGACATCTGCCAATAATAATATAGCAAAAGTAACGAATGAATCGTTATTTAAATTGTTGCCTGCTGATACACTTTGCCTTGATTTATTGGCATCAAGTCATCTTCTGAGCCAAAGGAAGAATGACCATCATATCAAAGAGAGGCTTGGAGTATGTAAAAATAGGCTGAGATTGAAAGAGCAGATTCTTACCTTAAAGTTCAAGGCATATCGTCACTTGTGGAAAGAGGATCTGCGACTACTTTCTGCAAAGAAACAACGCTCCAAGTCTAACAAGCGCATTGATCAGAGCAACCGGGCATCACATATTGGATCTCAGAGGCAACGATCCTCCAACCGTTCACGATTGGCCATGCCTGCTGGTAATTTAAGTACATTCTCAACTCCAGAAATGTCAGATGTTGCAAGCAAGTTGTTTTCAGAATTTCAGATTAAGCGCTGCAGAAACTACCTGAAAATGCCAGCACTTATTATAGATGAGAGAGAGAAAGAATGCTTGAGGTTTGTCAGCAAGAATAGCTTGGTTGATGATCCTGTTTTAGTCGAGAAGGAGCGGGTAATGATAAATCCATGGACACAAGAAGAAAAGGAAATATTTATGGAGATGCTTGCTAAATTTGGCAAGGATTTCTCCAAAATCTCCAGTTTCCTTATGCACAAAACTACTGCTGATTGTGTGGAGTTCTACTACAAGCATCATAAATCAGACAGTTTCCGAGAAGTCAAGAAACTTTTGGACCTTCGTCAGCAGCAACCCACTGGCAATTTTCTAGGAGCAAAATCTGGAAAGAAATGGAATCCTGAGGCAAATGCTGCTAGTCTTGATATGCTTGGAGTAGCATCAGTAGTAGCAGCCCATGGCCTTGAATATGCAAACAGAGTGGAGAAAGTCTCTGCGAAATCCCTCATCCGGACTGCATATGGGTCCAGTATTTCTTTTGCAGCCAAAAAATCTTCTGACAGGGAAGGCATTGATAGTGTACCTTTGAACGAGAGAGAATCTGTTGCTGCTGATGTATTAGCAGGCATATGTGGCACTCTCTCTCCTGAGGGAATGGGCTCATGCATCACTAGTTCTGCTGATCTTGGTCAGAAGATTGGCATGACGAGAATGGAGCATATCTTAGCCTCTGAATTTGACAGAAGCATTGATGAGGAAGATACACTCTCAGATCAAGAGTGTGAAGTTGATCCAGTTGATTGGAATGATGATGAGAAGTCAATTTTCATTGAGGCTATGAACAACTACGGAAAGGACTTTGCTCGGATTTCATCATGTGTGAAAAGCAAGTCCTATGAGCAGTGCAAAGTATTCTTCAGCAAGGCTCGGAAATCACTTGGTTTGGATTTGATCCATCGAGGAGCAGCTGATGTTAGTATGCCAACTAGTGATACAAATGGAGGGAGGAGTGATACTGATGAGGCATGCGCTGCTGAAATGGATTCAGCTATCTGTAGCACGCAGTCATGTTCAAAAATTGAGATGGATGTATGCCCTACTGAAAAAGGCATTGGAGGTATAATCACTAAGCAGCCAGAACTTAATCCATCAAATGGGTTTGATGCTGTGAATGGTAAAACTGGGGAAGATGAGAAAAAGGCTGATAAAAATTGCGGTATTGTTGATCATGAAAGGTTCGATGAAGGTACTCATCAAGCAGCATGTGGTCCTATTGACATTAATTGTCCAGAAAGCACAGAGAAGCTGCATGGAAAAGATGATGCCGTTGACCAAGTAAATATGCACAACAATAGTGCCATCAGCTCCTCAACTGATCAAGCAATGGCAGTGCAGTCAGAAGTCGGATCCTGTTTACATTCTATTGAGGTACTTCATCAAACAAGCAAAGCCCCTTCAGGGAGTGGCACTGATGCTTCCGGGATGGAAGAATGTTCAAACCATGCTCTTGATAATAAGCTATTGAAAGCTGGAAATTCTGGTGCCTCATCTTGCATAGCTTCAGATACCTGTGACAATGTTCAATTTGCAAACATGACTGGTGCTTCCACCATTAGTCCTACATTTGCTTCAAGTTATAAGCATTCTGTGCCAGCAGATATGGCCCCGACAAAACCAAAGCCACTGGTTGCTCCCCTTACCCCAAAGGATTTAATGCCTGTGCAGTTCAGTTCTGCAGTTCCTGATCCTACTGTAATTCGTTTTGATGGCATAGCTTCAATAACTATGCCCAATTTTGAGGACAGTGGTAGCAGAGTCAGCAGTGCTTTAGGGCCCAAAGATATGAGCAAGTACCCAGCTTTTAAAGACCCAACCGGTAATCAGCATGACACATTGTTTCGTAATGTTGATGGTTTCACGAATCATCTGACAACTGAATTACCAATTTTTTCTGAAAGAACTGCAAGTGGCACTGCGAGTACTTCTCAGACTGATCGGTTCACTCTAACAAAATTCCAGAATGGCAAGTCCAGCAGTTTGGGCCTTCCAAACACTTCTGATGGGATTCAATGGGCCAGAAAACACGAAGAAGTATTGCAAGGCTCTCTGAGGTCATGCTCTCAAAATACAAGTTCTGAGGGTGATGAGCAACAAAAGCGGCCTGGTGATGTCAAGTTATTTGGGAAGATTCTCAATCATCAATCGTACTTGCAAAGTTCTGTCCCATCATGTAACGGTAACAAGAGCAAGCCTCCCTCGCCAAAGGTTGACATGTCATCTGTGAGATTGTCGAACAATCCAAGGGATCGTGTGGTTTGTTCTTCCAGGCCTGGCGTCACTCATTTGGGTCTGGAGGAAAGAACAGCTAGGAGCTATGGCCATTTGGATGTAAGCACAACACAGCCAGAGCCACTGCTCATGATGGCGAAGTGCCAGAGCTTAGCTGGTGTACCGTTTTACTCGGCTAAAAATGGTGCCGTTGGTGTGTTCTCAGATTATCAACAGCCTTCGATTCAGCCGCATCAATCAGATCCGAAACGGCTGGAAAGGTTTTCTGATCCACAGAAGCGCAACGGGATGGAACTCATCTCGGGTTTCCAGCAGCCTGGTAAAATCTCACGGTTTGGGGGTGCTGGTATCCTTGTAAGCGGCGTCTCAGACCCTGTGGCTGCTCTCAAGGCTCAGTATGGTCCCAGTTCTAAGGTTATGGGCAATGACGTGGATCCTTGGAAGGACATAGGAAGCAGGTAG
Protein Sequence:
- >Pahal.C01181.2|Panicum_hallii|MYB_related|Pahal.C01181.2
MPPPPPDRRDYLYREGRRHDGGGGGDPLLPPAPTPPRWRDSPYHPPPPPPLRDHARPSPRRAPPSASSEGYYRQAGGAYDRSYPDEPPLGYTPSRSDRYWTEDDGGGYKGFGRYGGGGGRRDGRDIRGSYRRSPFRGYGSDFSRNHPEQPPPPPPRRSPLRSVAVPICYDPPGNRVDKGDRDNLPRVTPWRRRESRSEVADAAGAGPVSVGQTTRSAPSEKEASAQPPAGAAPHGADEEAPRKKARLGWGQGLAKYEKQKVQGPADLAEAVADGSPADSEQKAAFPVPPPPPEPPAAPAPLPEPPAAPAPPPEPPAAPAPPPPPAPPAAPAPPATPAPEPLAPVQPAAPVPAAVYVPAPVSAPSPARCPSPVDAPSSAAPFCTSAPEDKSYEQMAHMAIHPTKDVPEAGDKTFNTEFSIKFDQLGSDPINSLANMLADLLQHDDSCSGDSKGPTNASKLLLLKESISKEIEKTELEIDLLEGELKSVSTKAGTAVEGSPTGVTYAEILSPSSGTSKVPVCVEISETSHVMKEPVELISSPKPPVVQDANAKGSDMMEIENAPVRNAKTVSSEESAVSPVVAEGPACAAADLSPLKASEGAGSQIDMDNDRLETSPCHDNADSIKTEVSDDPPVRQCSHHDHKYSLTSANNNIAKVTNESLFKLLPADTLCLDLLASSHLLSQRKNDHHIKERLGVCKNRLRLKEQILTLKFKAYRHLWKEDLRLLSAKKQRSKSNKRIDQSNRASHIGSQRQRSSNRSRLAMPAGNLSTFSTPEMSDVASKLFSEFQIKRCRNYLKMPALIIDEREKECLRFVSKNSLVDDPVLVEKERVMINPWTQEEKEIFMEMLAKFGKDFSKISSFLMHKTTADCVEFYYKHHKSDSFREVKKLLDLRQQQPTGNFLGAKSGKKWNPEANAASLDMLGVASVVAAHGLEYANRVEKVSAKSLIRTAYGSSISFAAKKSSDREGIDSVPLNERESVAADVLAGICGTLSPEGMGSCITSSADLGQKIGMTRMEHILASEFDRSIDEEDTLSDQECEVDPVDWNDDEKSIFIEAMNNYGKDFARISSCVKSKSYEQCKVFFSKARKSLGLDLIHRGAADVSMPTSDTNGGRSDTDEACAAEMDSAICSTQSCSKIEMDVCPTEKGIGGIITKQPELNPSNGFDAVNGKTGEDEKKADKNCGIVDHERFDEGTHQAACGPIDINCPESTEKLHGKDDAVDQVNMHNNSAISSSTDQAMAVQSEVGSCLHSIEVLHQTSKAPSGSGTDASGMEECSNHALDNKLLKAGNSGASSCIASDTCDNVQFANMTGASTISPTFASSYKHSVPADMAPTKPKPLVAPLTPKDLMPVQFSSAVPDPTVIRFDGIASITMPNFEDSGSRVSSALGPKDMSKYPAFKDPTGNQHDTLFRNVDGFTNHLTTELPIFSERTASGTASTSQTDRFTLTKFQNGKSSSLGLPNTSDGIQWARKHEEVLQGSLRSCSQNTSSEGDEQQKRPGDVKLFGKILNHQSYLQSSVPSCNGNKSKPPSPKVDMSSVRLSNNPRDRVVCSSRPGVTHLGLEERTARSYGHLDVSTTQPEPLLMMAKCQSLAGVPFYSAKNGAVGVFSDYQQPSIQPHQSDPKRLERFSDPQKRNGMELISGFQQPGKISRFGGAGILVSGVSDPVAALKAQYGPSSKVMGNDVDPWKDIGSR*