Information report for Pahal.A02085.1
Gene Details
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Functional Annotation
- Refseq: XP_025812020.1 — nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
- TrEMBL: A0A2S3GPX6 — A0A2S3GPX6_9POAL; Uncharacterized protein
- STRING: Pavir.Aa01714.1.p — (Panicum virgatum)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi3g45450.1.p
- Panicum virgatum: Pavir.1NG308200.1.p, Pavir.1KG332000.1.p
- Setaria italica: Seita.1G190100.1.p
- Setaria viridis: Sevir.1G194100.1.p
- Zea mays: GRMZM2G119133_P01, GRMZM2G059167_P03, GRMZM2G059167_P02
Sequences
CDS Sequence:
- >Pahal.A02085.1|Panicum_hallii|MYB_related|Pahal.A02085.1
ATGGCGGCTGCGGCGGCGGGGGCAGGGAAGGGGAAGCGGAAGCGGTCTCTCTCCGAGGACGACGTCTACCTCCTCCTCCACAGGTACGCGCCCGGGACGATCCTGACGGCGCTGCAGGAGGTGGCGCAGCACGCGGAGGGCAGGCGCATCGACTGGAGGGCGGTGGTGGGGAAGTCGGCCACGGGGATCACCTCCGCGCGCGAGTACCAGATGCTCTGGCGCCACTTCGCCTACAACCACGTCCTCGACGACACCGTCGACGCCGGCGACCAGCCTCTGGGCGATGACAGTGACCTGGAATTGGAGCTTGAACCAGTTCCTAACCCGACCAAGGAAGCTTTATCTGAGGCCTCTGCATTAGCCAAGGCACTAATATCCGGATCTTCACGTGAGCAAGCCTCTGGTCAACGTCTTAATTTGGATGCTCCTGTGCTGAACGCCCCAAATGAAAAGACAGTGCGGGTTCCATCTGAGAAACAGCTTGCTCAGAATCACCGCATAACAAACATTACAGGTCCTGTTTCCAACTCAAAACAGGCATCCCATTTAGGGCCCTCTCCTGGTTCTTTGGATCCAAATGGACCTTCTAAAAAGAAAAAGAAGCCTAAAGCATGGTCTAAAGAGGAGGATGCAGACCTAGCAGCTGGTGTACAGAAGTACGGTGAAGGAAATTGGGATTATATTTTGCATAAATGTAAATTTGATAATACAAGGACGCCTGATCAGTTGTCTCAGAGATGGGCGCTAATTTGCAAGCGTCCAGGAGGATCAACCAAGCCTGCTAGCACTAAACATGCCACTGTCGCTAGCTCAGAGGAAAGAAAGGATGCTCTTAAGGCACTTTCAATTGCTGTTGGTCCTATGCGTAGATCATCTATGCTAAGACCAGGAGCTCAGCAACAAGGCATTCAGCATAAGTCTACAGTGTTTGCTCCTAAGATACCTGAAGGAAGATCCGCAGCAGCTCCTTCACCAGCACCGGCACTGCCGGTCCCAGTGCCGGTCCCAGTGCCAGTTCCCATGCCTTTGCCTGTGAAAGCACCAGTCAAGTCGCCAGTTCCTCAGGGGCAACAAGCACCTGTCCAACGCGCACCTCCAAAATCAGCAAATGCTTCAAATAAGACTCGTAAGAAGCAATCTCCCCAACCAAGTCCTATCATTGGTCCTTCCTCAATACAAGCAGCAGCTATTGCTGCTGGTGGACGAATCGCCCCAGCCTTAACGGCCGCAAACTTCTTAAAAGTCGCACAGTCTGCGCACATAAGATCTCAAGTAACAGGATCTTCAAAACCTTCTGCAAGCACTAAAGCACAAAGTGTGGTTGTTGAACCTGGTACACAACCTGGCAGCATTCAGCATCTAGAACCTCTAAACACTAGCGCCCCTAAATCTGGCCCTTCAGTTTTGACCACGCATGCAACTGAGCAAGTTCATGGTGCTTCAGAGGTTGCTGTAGTTAATCCTCCAGGGCCATCTGCCGGGGCACATCCATTGGAAACTAATAAAGCATTGAGTACCACACCAGTGCCTGTCTCATGTGACAGCGAGGAAAAGGAGGACGACTCTACATTTTGTGTTATCACTATAGATGACTTGTTCCCTGAAGATGCAGTGCAGCTAGAAACAGTAGATCTCGAGGCAAAGCCAGAAATTGCCGATGAGAAGGCAAAGCAGCTGGAAACTGTGGATCCTGTGGATCCCAAGGCAAAGCAGCCAGAAACTGTGGATCCCAAGGCAAAGCAGCCAGAAACTGCGGATCCCAAGGCCAAGCAGCCAGAAACTGCGGATCCCAAGGCCAAGCAGCTAGATACATTAAATCCCAAGGTTGAGATGGTAGATCCCAAGGATAAAGACATGCTTGAGTTTGATCAATTTGTTGCTTCTCAAGGAGGAGCTGTAAACACAGATCATTTGGATAAAAGCAACAGAAGTGCTGCACAAGCCCAAGCCCTTGTTGGCAGCCAGAAGAAGCAAGTGAAACTGGTGCCCACCATAGGGAAAGGCAACCCTGTATCAGCTGGTGTGCCAGCAACCGTGAAGAGAGCCAAAACTTCTATCCCACATTTAGTGAACCCAGTCCCAGCCGGGAGTCCCCGTGGCATTGTTGGCACAGTCAATGCGAATGCACCTAATAAGACACTAGTAAGGAAGGCAACTACTCTTGTTCCTGCTGGTGTTCGAGCCCCTCTCCTGAAGAAGCATGCCACGAACGGAAAAGGCTACCAAGTGATGCAGCCCAGCACTGGCTCTGGAGTACCGGCCAGCAGCCAGGCTAGCGTGGCCGTGAATGGTGCTAGCAAGGTGAATCCGCCATCCAGCGGCGGCCAAGCGAGCTCGGTGGTGAATATTGGTAGCAGAGCGAATCCACCATACAGTGGCCAGGCTAGCGCAGTGATGAATATTGGTAGCAAGGCAAATCCACCATCAAGCGGCCAGGCTAGTGTGGTGGTGAATGGTGCTAACAGAGCGGCCAATCCACCGTCCAGCGGTAAGGCTAGCGCAGCCTTGAGTGGTGCTGCGAACATGGCGAATCCACCAGCTGCACCCAAGCAATAG
Protein Sequence:
- >Pahal.A02085.1|Panicum_hallii|MYB_related|Pahal.A02085.1
MAAAAAGAGKGKRKRSLSEDDVYLLLHRYAPGTILTALQEVAQHAEGRRIDWRAVVGKSATGITSAREYQMLWRHFAYNHVLDDTVDAGDQPLGDDSDLELELEPVPNPTKEALSEASALAKALISGSSREQASGQRLNLDAPVLNAPNEKTVRVPSEKQLAQNHRITNITGPVSNSKQASHLGPSPGSLDPNGPSKKKKKPKAWSKEEDADLAAGVQKYGEGNWDYILHKCKFDNTRTPDQLSQRWALICKRPGGSTKPASTKHATVASSEERKDALKALSIAVGPMRRSSMLRPGAQQQGIQHKSTVFAPKIPEGRSAAAPSPAPALPVPVPVPVPVPMPLPVKAPVKSPVPQGQQAPVQRAPPKSANASNKTRKKQSPQPSPIIGPSSIQAAAIAAGGRIAPALTAANFLKVAQSAHIRSQVTGSSKPSASTKAQSVVVEPGTQPGSIQHLEPLNTSAPKSGPSVLTTHATEQVHGASEVAVVNPPGPSAGAHPLETNKALSTTPVPVSCDSEEKEDDSTFCVITIDDLFPEDAVQLETVDLEAKPEIADEKAKQLETVDPVDPKAKQPETVDPKAKQPETADPKAKQPETADPKAKQLDTLNPKVEMVDPKDKDMLEFDQFVASQGGAVNTDHLDKSNRSAAQAQALVGSQKKQVKLVPTIGKGNPVSAGVPATVKRAKTSIPHLVNPVPAGSPRGIVGTVNANAPNKTLVRKATTLVPAGVRAPLLKKHATNGKGYQVMQPSTGSGVPASSQASVAVNGASKVNPPSSGGQASSVVNIGSRANPPYSGQASAVMNIGSKANPPSSGQASVVVNGANRAANPPSSGKASAALSGAANMANPPAAPKQ*