Information report for Pahal.A01861.1
Gene Details
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Functional Annotation
- Refseq: XP_025820632.1 — transcription factor TFIIIB component B’’-like isoform X2
- Refseq: XP_025820634.1 — transcription factor TFIIIB component B’’-like isoform X4
- Refseq: XP_025820635.1 — transcription factor TFIIIB component B’’-like isoform X5
- TrEMBL: A0A2S3GPC2 — A0A2S3GPC2_9POAL; Uncharacterized protein
- STRING: Pavir.Aa02686.1.p — (Panicum virgatum)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Panicum virgatum: Pavir.1NG176100.1.p, Pavir.2KG316400.1.p
- Setaria italica: Seita.1G142100.4.p, Seita.1G142100.2.p, Seita.1G142100.3.p, Seita.1G142100.1.p, Seita.4G265300.5.p, Seita.4G265300.3.p
- Setaria viridis: Sevir.1G140500.1.p, Sevir.4G277800.4.p, Sevir.4G277800.5.p
Sequences
CDS Sequence:
- >Pahal.A01861.1|Panicum_hallii|MYB_related|Pahal.A01861.1
ATGACCGCCAGATGCCAGCCACCTAACGGACGGGGCTCAGCTCGGTCATCTCCTCCACCTCTGACGCACGTAGGCCATCTCCAGCAGCGTGCCGGCCACCTCCTGCCGTCGGCCGCCCATTTGTCACGTCAGACTACGCCCCTCCTGCCGCCCCAGACCCCAGCCATGCTGGATCTGGCCTGCTGCCAGGGCTATCCAGGTCAGGTCGCCGCTGCCCACCGTCAAGCTCAGGCTGCCGCACCTCCCTTCTCTCAGCCGCTTGGACATGCATCGATGCCTTGTCCATGGATCATCGCTGAAGCCACTTGTAAGTCTCAACCAAATGTTGGAAGAGAAAAGGGCAAAGGAAAATCTGTATCTTTTGGTCTGTCAGATGCTTCTGGGGTTGTTACTCCTACAGATACCAATTCTGAGATGGGTAACTTCAGCAATTCCTGTAATGACAAGTTAACTGATGAAAACTTACGTAACTTATCTCAGCAGACGGTTGAAAAGGAACATAATGATAATGAGAGCTGGTACCATGAGGGGGAACCATTAGATCATGCTGTTGAACAACTACCAAAATCGGGTATTGGAGAAAACAGATCATCTATGAAACTACGGAGCAGGAAAAAGTCACAGAAAGTTGGGACACCTAAGCATACAGATGACTATTTTGATGAAGACTGTGTTGAACCTTCATTAGTTGAAGAAGATAATGATAGTGGTGATGATTACACTGCCGGTACTAATCGGAAGGTTAGGAAAAAATCAAGGGATGATGTGGAAGAGCCACAGCAGCAAAATGTCCAAAAAGATAAAAGCCAGGTATCTTCACGGGGTCGCAAGAGAACCTTGAAAGATGCATCGGCAGAAAAACCTGAGAAGAAGCTTACCCATAGAATTCGTCAGAGGAGAGCGAAAGAGGTTAAGACTTTACTGGAAAAACCTCATGAGATAAATCCCATGAAGCTAAGTGCAGCACACCTGAGGTTGTTACAAGAGGCCAGAGAGTGTGTTAATGCAAAAGAGAATCCATCTGGGCCATCCTCTAATACAAGCTTTCAATTTCATGATATGGATGATTTGGACTATGGAGATGAGGAAGCAAGGAACTTCGACAATGACAGAACACAGAACCATGTACAAGATACAAAAAAGTTGAACTACCATTCCTACATGAACAAACAAACTCGGGGCAAATGGTCAAAATCTGATACTGATGTGTTTTATCAGGGGCTTCGACAATTTGGTAGCGATTTTGCAATGATACAGCAATTACTCCCTGATAAGACCCGTCAGCAGGTGCGGGCAAAATTTAAAACCGAGGAGAAAAAAAATCCGTTGCTAGTCCATGATGCTATAATTCATCGCTCAGGAATAATTTGTATTTCAAAAAGGTAA ATGCTGGATCTGGCCTGCTGCCAGGGCTATCCAGCTGAAGCCACTTGTAAGTCTCAACCAAATGTTGGAAGAGAAAAGGGCAAAGGAAAATCTGTATCTTTTGGTCTGTCAGATGCTTCTGGGGTTGTTACTCCTACAGATACCAATTCTGAGATGGGTAACTTCAGCAATTCCTGTAATGACAAGTTAACTGATGAAAACTTACGTAACTTATCTCAGCAGACGGTTGAAAAGGAACATAATGATAATGAGAGCTGGTACCATGAGGGGGAACCATTAGATCATGCTGTTGAACAACTACCAAAATCGGGTATTGGAGAAAACAGATCATCTATGAAACTACGGAGCAGGAAAAAGTCACAGAAAGTTGGGACACCTAAGCATACAGATGACTATTTTGATGAAGACTGTGTTGAACCTTCATTAGTTGAAGAAGATAATGATAGTGGTGATGATTACACTGCCGGTACTAATCGGAAGGTTAGGAAAAAATCAAGGGATGATGTGGAAGAGCCACAGCAGCAAAATGTCCAAAAAGATAAAAGCCAGGTATCTTCACGGGGTCGCAAGAGAACCTTGAAAGATGCATCGGCAGAAAAACCTGAGAAGAAGCTTACCCATAGAATTCGTCAGAGGAGAGCGAAAGAGGTTAAGACTTTACTGGAAAAACCTCATGAGATAAATCCCATGAAGCTAAGTGCAGCACACCTGAGGTTGTTACAAGAGGCCAGAGAGTGTGTTAATGCAAAAGAGAATCCATCTGGGCCATCCTCTAATACAAGCTTTCAATTTCATGATATGGATGATTTGGACTATGGAGATGAGGAAGCAAGGAACTTCGACAATGACAGAACACAGAACCATGTACAAGATACAAAAAAGTTGAACTACCATTCCTACATGAACAAACAAACTCGGGGCAAATGGTCAAAATCTGATACTGATGTGTTTTATCAGGGGCTTCGACAATTTGGTAGCGATTTTGCAATGATACAGCAATTACTCCCTGATAAGACCCGTCAGCAGGTGCGGGCAAAATTTAAAACCGAGGAGAAAAAAAATCCGTTGCTAGTCCATGATGCTATAATTCATCGCTCAGGAGTTATATTGCTTAACTCGGATAATTTGTATTTCAAAAAGGTAATTAAGAATCTCAACATTGAAGATGTCGCACAGCAAGAGATTAACAATACTCATAAACAAGATGGCGCATCAAGTGAACCTGGAAAAGAGGATGCACTTGATGATTGCATCCATGAGGAAGATGATTCGAATTGGTTGGATGAAGAGCCCGGTGTACAAAAGCCTGAAGAGCACGCTTCTGGAAATGATGACGATGGTGATCTTGGTGATGTTTTTGATTGGTACTAG ATGGGTAACTTCAGCAATTCCTGTAATGACAAGTTAACTGATGAAAACTTACGTAACTTATCTCAGCAGACGGTTGAAAAGGAACATAATGATAATGAGAGCTGGTACCATGAGGGGGAACCATTAGATCATGCTGTTGAACAACTACCAAAATCGGGTATTGGAGAAAACAGATCATCTATGAAACTACGGAGCAGGAAAAAGTCACAGAAAGTTGGGACACCTAAGCATACAGATGACTATTTTGATGAAGACTGTGTTGAACCTTCATTAGTTGAAGAAGATAATGATAGTGGTGATGATTACACTGCCGGTACTAATCGGAAGGTTAGGAAAAAATCAAGGGATGATGTGGAAGAGCCACAGCAGCAAAATGTCCAAAAAGATAAAAGCCAGGTATCTTCACGGGGTCGCAAGAGAACCTTGAAAGATGCATCGGCAGAAAAACCTGAGAAGAAGCTTACCCATAGAATTCGTCAGAGGAGAGCGAAAGAGGTTAAGACTTTACTGGAAAAACCTCATGAGATAAATCCCATGAAGCTAAGTGCAGCACACCTGAGGTTGTTACAAGAGGCCAGAGAGTGTGTTAATGCAAAAGAGAATCCATCTGGGCCATCCTCTAATACAAGCTTTCAATTTCATGATATGGATGATTTGGACTATGGAGATGAGGAAGCAAGGAACTTCGACAATGACAGAACACAGAACCATGTACAAGATACAAAAAAGTTGAACTACCATTCCTACATGAACAAACAAACTCGGGGCAAATGGTCAAAATCTGATACTGATGTGTTTTATCAGGGGCTTCGACAATTTGGTAGCGATTTTGCAATGATACAGCAATTACTCCCTGATAAGACCCGTCAGCAGGTGCGGGCAAAATTTAAAACCGAGGAGAAAAAAAATCCGTTGCTAGTCCATGATGCTATAATTCATCGCTCAGGAGTTATATTGCTTAACTCGGATAATTTGTATTTCAAAAAGGTAATTAAGAATCTCAACATTGAAGATGTCGCACAGCAAGAGATTAACAATACTCATAAACAAGATGGCGCATCAAGTGAACCTGGAAAAGAGGATGCACTTGATGATTGCATCCATGAGGAAGATGATTCGAATTGGTTGGATGAAGAGCCCGGTGTACAAAAGCCTGAAGAGCACGCTTCTGGAAATGATGACGATGGTGATCTTGGTGATGTTTTTGATTGGTACTAG ATGGGTAACTTCAGCAATTCCTGTAATGACAAGTTAACTGATGAAAACTTACGTAACTTATCTCAGCAGACGGTTGAAAAGGAACATAATGATAATGAGAGCTGGTACCATGAGGGGGAACCATTAGATCATGCTGTTGAACAACTACCAAAATCGGGTATTGGAGAAAACAGATCATCTATGAAACTACGGAGCAGGAAAAAGTCACAGAAAGTTGGGACACCTAAGCATACAGATGACTATTTTGATGAAGACTGTGTTGAACCTTCATTAGTTGAAGAAGATAATGATAGTGGTGATGATTACACTGCCGGTACTAATCGGAAGGTTAGGAAAAAATCAAGGGATGATGTGGAAGAGCCACAGCAGCAAAATGTCCAAAAAGATAAAAGCCAGGTATCTTCACGGGGTCGCAAGAGAACCTTGAAAGATGCATCGGCAGAAAAACCTGAGAAGAAGCTTACCCATAGAATTCGTCAGAGGAGAGCGAAAGAGGTTAAGACTTTACTGGAAAAACCTCATGAGATAAATCCCATGAAGCTAAGTGCAGCACACCTGAGGTTGTTACAAGAGGCCAGAGAGTGTGTTAATGCAAAAGAGAATCCATCTGGGCCATCCTCTAATACAAGCTTTCAATTTCATGATATGGATGATTTGGACTATGGAGATGAGGAAGCAAGGAACTTCGACAATGACAGAACACAGAACCATGTACAAGATACAAAAAAGTTGAACTACCATTCCTACATGAACAAACAAACTCGGGGCAAATGGTCAAAATCTGATACTGATGTGTTTTATCAGGGGCTTCGACAATTTGGTAGCGATTTTGCAATGATACAGCAATTACTCCCTGATAAGACCCGTCAGCAGGTGCGGGCAAAATTTAAAACCGAGGAGAAAAAAAATCCGTTGCTAGTCCATGATGCTATAATTCATCGCTCAGGAGTTATATTGCTTAACTCGGATAATTTGTATTTCAAAAAGGTAATTAAGAATCTCAACATTGAAGATGTCGCACAGCAAGAGATTAACAATACTCATAAACAAGATGGCGCATCAAGTGAACCTGGAAAAGAGGATGCACTTGATGATTGCATCCATGAGGAAGATGATTCGAATTGGTTGGATGAAGAGCCCGGTGTACAAAAGCCTGAAGAGCACGCTTCTGGAAATGATGACGATGGTGATCTTGGTGATGTTTTTGATTGGTACTAG
Protein Sequence:
- >Pahal.A01861.1|Panicum_hallii|MYB_related|Pahal.A01861.1
MTARCQPPNGRGSARSSPPPLTHVGHLQQRAGHLLPSAAHLSRQTTPLLPPQTPAMLDLACCQGYPGQVAAAHRQAQAAAPPFSQPLGHASMPCPWIIAEATCKSQPNVGREKGKGKSVSFGLSDASGVVTPTDTNSEMGNFSNSCNDKLTDENLRNLSQQTVEKEHNDNESWYHEGEPLDHAVEQLPKSGIGENRSSMKLRSRKKSQKVGTPKHTDDYFDEDCVEPSLVEEDNDSGDDYTAGTNRKVRKKSRDDVEEPQQQNVQKDKSQVSSRGRKRTLKDASAEKPEKKLTHRIRQRRAKEVKTLLEKPHEINPMKLSAAHLRLLQEARECVNAKENPSGPSSNTSFQFHDMDDLDYGDEEARNFDNDRTQNHVQDTKKLNYHSYMNKQTRGKWSKSDTDVFYQGLRQFGSDFAMIQQLLPDKTRQQVRAKFKTEEKKNPLLVHDAIIHRSGIICISKR*