Information report for Pahal.A01305.2
Gene Details
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Functional Annotation
- Refseq: XP_025796639.1 — TSL-kinase interacting protein 1 isoform X2
- TrEMBL: A0A2S3ISI1 — A0A2S3ISI1_9POAL; Uncharacterized protein
- STRING: Pavir.J22108.1.p — (Panicum virgatum)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi1g68510.2.p
- Panicum virgatum: Pavir.9KG521200.2.p, Pavir.J300000.1.p, Pavir.9NG849600.1.p, Pavir.9KG521200.1.p
- Setaria italica: Seita.9G473800.1.p
- Setaria viridis: Sevir.9G477500.1.p, Sevir.9G477500.2.p
- Zea mays: GRMZM2G152319_P02, GRMZM2G152319_P01
Sequences
CDS Sequence:
- >Pahal.A01305.2|Panicum_hallii|MYB_related|Pahal.A01305.2
ATGGAGGAGGAGGTGCGTGGAGAGTTGAATCCACTACTTCAAACTATAGAGTTTGCTCCTTCAACATCTGATCCAAATCAGAAGCTTGATTCGGCGCAGCCTTCCGATCCCAATCAGAAACCTGCGAAAAAGCCGACTCGTCAATGGGCTGCGTGGACGCGCCAAGAAGAGGAGAATTTCTTCAATGCTCTGCGGCAAGTTGGGAAAAACTTTGAGAAGATTACACACCGTGTTCAGAGTAAAAACAAGGATCAGGTCAGGCATTACTACTATCGTCTTGTTCGGCGCATGAAGAAACTATTGGGTCCTGGATTCTCACTTGATGCAAAAAACTCCAAGGATACCATTGCTGCGATGCTACGTTGGTGGTCTCTGCTCGAAAAATTTAGCTGCAGTGCATCAAAGCTGCATCTGAAGCCTCGGAGATTCAAAACATTTGTAGAAGCATTGGGAAATCAACTGCTAAAGGACAGAAATAAGTCCAGAAGAAAGTGTCCAAGAGTGGATATGTGCATATCTTCTCCATCTCCAATTGTTAGCAAGGGTCCTGGCAATGAGTCTTTCCCTGTAAAATTCTTGCCAGTTGATTCTCAAAATGGTAGCAGAGTGGCATCTCCTAAAGGGGCATTTTTGAAGCGGATGCCGGAAACAAATTGTAGCAAGTCAGGAGCAACTAAAGGAGACCTCTCTGCCACAAGAACCGTGAAACAAAAAAGGAGGGCAGGTGGTGTTGTTGCATCTGCTGCATACAAAAAATGGGAGAGAGCAGCCATGGCAGGTGTTTCTTTAGTTGCTGATGCAGCTGAGGAGCTTGAGCGCAACACAATTAACCCCAGCATGTTATGTAATGTTGATGCAAGAACACTGACTTCTTCATCAGACAAACTTTCTACTGTTGATGGCATTAGCACAAACCAGATGAAGGAAGCAGATTTACAAGCACCTGCAAAGCTGAAGCTGCAGTTATTTCCAATAAATGAAGCTACACGGAAGGCATTGGAGAAGGATGAACATAATCCACATCTGGAGCTCACATTAAGTTCTAGGAAGAAAATATCATCTGTGCTAGAACACCTGAACCGCAAATGGGGTAACTCAAACATCGCATCTGGAGAGCTTATTCTTTTTCCATATTGTGCTCATCAAGAGGATTTAGCCTCATATCAGAGGTGGACAACAAGAGATACTGTTGCAGTAGCTGACGTGTTTCTTTCTGTGAATAGCCCTTCTATTTTCCGTTTAAGGTATGGTTGGTTTTCCCTTGTTGAGCTTGAAGCAGGAGTAAGTGAAATATCCTTAACCCATTTTGAGAACTGCATGATACCGGAAGACATCCAGGTCAAATCGCCCTCAGGAGATAAGGCTTGTGTGCAAAAGGATGGCAAGAACACCGAGGTTCCAGAGCAGCCCACCAGTGCACCCCCGTCTCAGTTTGGCAGCCAGAAGCAAGTGCAGGATCCTGTGACTCAAGCTTTCGAGGATGATCAAGGAATGAATTGTGCTGCAATATCTGAAGGAGAGTGGGCAGATACCCTTACTGATATCAGTGTTGGGTACTTACTTACTGAAGCATCCAAGGGTGCTCATTTGGACTGTATAGGAACTTCTAGTGTCAAAAATGCTTTGTTCCTTGAGAATCAGTGCAGCTATGACTCGTTTGATGCTGCTGTTGCCCTTCATGTTTCTCGTTTTCAAGCATCACAGCAGCCAGCCCATACTCCCCATTCAACCATCTGGGGAGCAGAAGAAACATGTGATGGGTTCAGTTTTAATTTGTCAGCATCCAGGAAGCAAGAAGGCTCAAACACTCCCTCTAGCAGCTCTCCTGATACTGACAATGAAGTTCGTACATTAAATTCGGAAGGGTTTCGAGGTTTTCTTCAGGACTTGACTGGAGGAGAGGCTGCTGGTGATAATACTTATAATGATGATGCCAAAGACAGGGAGGAGTTTTGTGCTAAATCACCACCTCGAAGTGAAGACACTAATGAGTTGAAGGATCAGTCTCTAGCTGACATATATTGGCCTGATTCACTCGGACCACTGGACTTGGACATACCGTCTGTGAGATATCAAGCCGATGACTTACTCATAGGGGACAGTCAAAATAGTTGGAATCGCATGATGGCAAATAGTCTGGATGCATTCCGGAACCTGTCGTTCTTCTCCTCGGTGGACAAGAACGACTCGATTCCATCGATCATGTAG
Protein Sequence:
- >Pahal.A01305.2|Panicum_hallii|MYB_related|Pahal.A01305.2
MEEEVRGELNPLLQTIEFAPSTSDPNQKLDSAQPSDPNQKPAKKPTRQWAAWTRQEEENFFNALRQVGKNFEKITHRVQSKNKDQVRHYYYRLVRRMKKLLGPGFSLDAKNSKDTIAAMLRWWSLLEKFSCSASKLHLKPRRFKTFVEALGNQLLKDRNKSRRKCPRVDMCISSPSPIVSKGPGNESFPVKFLPVDSQNGSRVASPKGAFLKRMPETNCSKSGATKGDLSATRTVKQKRRAGGVVASAAYKKWERAAMAGVSLVADAAEELERNTINPSMLCNVDARTLTSSSDKLSTVDGISTNQMKEADLQAPAKLKLQLFPINEATRKALEKDEHNPHLELTLSSRKKISSVLEHLNRKWGNSNIASGELILFPYCAHQEDLASYQRWTTRDTVAVADVFLSVNSPSIFRLRYGWFSLVELEAGVSEISLTHFENCMIPEDIQVKSPSGDKACVQKDGKNTEVPEQPTSAPPSQFGSQKQVQDPVTQAFEDDQGMNCAAISEGEWADTLTDISVGYLLTEASKGAHLDCIGTSSVKNALFLENQCSYDSFDAAVALHVSRFQASQQPAHTPHSTIWGAEETCDGFSFNLSASRKQEGSNTPSSSSPDTDNEVRTLNSEGFRGFLQDLTGGEAAGDNTYNDDAKDREEFCAKSPPRSEDTNELKDQSLADIYWPDSLGPLDLDIPSVRYQADDLLIGDSQNSWNRMMANSLDAFRNLSFFSSVDKNDSIPSIM*