Information report for Oropetium_20150105_17330A
Gene Details
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Functional Annotation
- Refseq: XP_004964675.1 — uncharacterized protein LOC101753656
- TrEMBL: J3MBT7 — J3MBT7_ORYBR; Uncharacterized protein
- STRING: OB06G14810.1 — (Oryza brachyantha)
- GO:0055114 — Biological Process — oxidation-reduction process
- GO:0003677 — Molecular Function — DNA binding
- GO:0016491 — Molecular Function — oxidoreductase activity
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi1g47563.1.p
- Hordeum vulgare: MLOC_9943.1
- Oryza sativa: AID1;OsMYBR57
- Panicum virgatum: Pavir.5NG307700.1.p, Pavir.4KG085200.1.p, Pavir.4KG073100.1.p
- Setaria viridis: Sevir.4G049300.1.p
- Triticum aestivum: Traes_7AS_73BC102D3.1
- Zea mays: GRMZM2G111906_P01
Sequences
CDS Sequence:
- >Oropetium_20150105_17330A|Oropetium_thomaeum|MYB_related|Oropetium_20150105_17330A
ATGCCGCGGCTGACGCCGGCGGACGCAACCCTGATTCTGGACCACGTCCTCGGCGACCCCTCCGACCCGGTCTCCGCTGACGCGCTCGACTCCATCCACCTCCTCGCCTCCCTCCCCTCCCCGTCCCCAGCCTTGGCACCGGCCCACCTCGCCGTCGCCGCGTTCCTCGCGGGCTCCGCGCCCGACTTCGATGCCGCCGCGGGGGCGCTCTTCGGACGCCCCGACGGCCGCGCGCGCCGCGCAGTTGGGGAAGGAGGCTCCCCAACGCTCGCCTCGAAGGAGGCCGTCGCCGTGGCGGACCAGTTCCATGCGGCTGTCGGGAATTCGTTCGCGCAGACCGTATTGAAGGGGCTGTTCGGCGACCGCTCCGCCGCGGAGGAGCGGGTCAGGGAGCTCCTCACCGCCGAGTGGGCCGCGATTGGACCGTCGCGGCTGGAGGAAGCTGCCGAGCGACTTGTGGGGATCAAAGCTATTGAGGCATGGCGTGCAGCGGATGAGGCTGCCCGTGCCAAGTACCGCATGCTTGTTGGGCAAGAAAGTTCACGGGAGATTCTAAGCAAACTTAAAGAAGCTTCCTCACATGTTAATCCAATTTCAACACCCGAAATTCGTAAGGTAGTCGATGCGCTTCAAACAAGCTGTGCTGACCTTCACAGATCAATGGAGGATCCACTTCCTGCTGCAAAGGCAGCCGCAGATGAGGTGTTGGCTGCAAGAATGGATAAGGCAGTTAATCTAAATGCTGCAAGTGTCAACAGTCGGCAGGCGAATTGTGGTACTGCAGGCCCAAGTTCCCTTAATGACAAAGACAAAGATCCTAATAAAAGGACGTGCAGTCTTATGGATCGGAACCCAACAGCACAGACCTATCAGTGGGAGGATTCTCCTGATACTGAAGGCCCACAGTTCGGTAGACCACACTTGCCTAGCCCAAGGAGGATTCCGGTTTCTCCTTTGCAACCCCTAGAAAACAAAAATAAGCGTAGAAGGGCAAGGAAGTGGTGCGTGCTAGAAGAAGAAACATTAAGAAAGGGTGTTGAACAGTATGGTACTGGTAATTGGAAGGATATTTTAGCTAATAATCCTGATGTCTTCATTGGCAGAACACCGGTGGACCTGAAGGATAAGTGGAGGAACATGACAAAGTACTCCCCGGACGTGAATGTGATGCCGCCTTCCGCTTCGCCTCCGTCCCGCCCGCTCCCCAACCTATCCCTCTGCTCCAGGCGAACCGTCTCAGCCGCAGCCTCATCCTCGCTGGCAGGAGGGCATGGCCGCCGCCCCCTTCGGTACGCCGTCCTCGGCGCCGGCTTCGCGGGGCTCTCCGTCGCGTGGCACCTCCTCAAGGTACCCTCTCCTCTTCTCTTCGCCCGTCCTCAAGTTACCCTCAAGCATCCGCTGAAGGCTGAACCGACGCTTGTACTCGACTACTCGTTCCAGCATAGCCCCAGCGACTCCCGCGTGTCCGTGGACATTTACGACGAAAACGGGGTCGGGGGAGGTGCGTCTGGCGTCTCAGGAGGGCTTCTCCATCCCTACTCACCAAAAGTAAAGCTTCTGTGGAAGGGTGCTGAATTCTGGAAAGAATGCATGGACCTCCTGCGTAGTGCTGAGCAAGCAAATGGAGCCGCTGGATCAGATAGGACTGTGTATATGCCAATGGCACTGAACATCAACCCTAAGAAATATTTGCAGGTGCTGCACGCCTTCATGCTTTGTTCACCTGCATTGTTCCTTGCATGCCAAAATCTTTCAGATGATGTATCTGTGTTACCAAGTGAACAGAAAGAGTTCAAGCTGTACAATCAACATATTGATAACCTGCAACAGTTAACTGGAGATTATGATTCGGTGATCATATGCCTTGGGGCCAAAGCTAGCTCACTTCCAGGACTTACAAATAAGCTGCCTCTTAGGGCCTGTAGAGGAGTTATTACTCAATTTCAGTTGCCATCAGATACAGGCGAAGAGTATGACAATCGAAGTCCTTCAATATTATCTGATGCATGGCTGGCGTTCCAAAGTTCCTGTAGCGTGTCTGTTGGGTCGACTTGGCAATGGAATTCTGAGAACTATGCTTCATTGGTATCGGATGAAGAGGCCCATACTGCAATGGAAGAGTTGCTCCCAAAAGCATCTGGCGTTTATCCAGGAATAACTAAATGGGATTTTGTACATGCAAGGGCTGGGATACGAGCAATGCCCCCACTGACGGCTAATGGATCCTTGCCCCTTTTGGGCTGTTTGAATGATTTATTAGGCGAGATGGGTAAGAGCAACTGTAAATTTTGGCTAGTTGGTGGGCTTGGTGCCAGGGGCCTTTTGTATCATGGTCTGGTTGGGAAGCTGACTGCCCAAGCTGCAATTTCCTGTGATGAGAGCTTGATACCTTCTGAATTCACTTGCTGGAAGGTGATATTCTGA
Protein Sequence:
- >Oropetium_20150105_17330A|Oropetium_thomaeum|MYB_related|Oropetium_20150105_17330A
MPRLTPADATLILDHVLGDPSDPVSADALDSIHLLASLPSPSPALAPAHLAVAAFLAGSAPDFDAAAGALFGRPDGRARRAVGEGGSPTLASKEAVAVADQFHAAVGNSFAQTVLKGLFGDRSAAEERVRELLTAEWAAIGPSRLEEAAERLVGIKAIEAWRAADEAARAKYRMLVGQESSREILSKLKEASSHVNPISTPEIRKVVDALQTSCADLHRSMEDPLPAAKAAADEVLAARMDKAVNLNAASVNSRQANCGTAGPSSLNDKDKDPNKRTCSLMDRNPTAQTYQWEDSPDTEGPQFGRPHLPSPRRIPVSPLQPLENKNKRRRARKWCVLEEETLRKGVEQYGTGNWKDILANNPDVFIGRTPVDLKDKWRNMTKYSPDVNVMPPSASPPSRPLPNLSLCSRRTVSAAASSSLAGGHGRRPLRYAVLGAGFAGLSVAWHLLKVPSPLLFARPQVTLKHPLKAEPTLVLDYSFQHSPSDSRVSVDIYDENGVGGGASGVSGGLLHPYSPKVKLLWKGAEFWKECMDLLRSAEQANGAAGSDRTVYMPMALNINPKKYLQVLHAFMLCSPALFLACQNLSDDVSVLPSEQKEFKLYNQHIDNLQQLTGDYDSVIICLGAKASSLPGLTNKLPLRACRGVITQFQLPSDTGEEYDNRSPSILSDAWLAFQSSCSVSVGSTWQWNSENYASLVSDEEAHTAMEELLPKASGVYPGITKWDFVHARAGIRAMPPLTANGSLPLLGCLNDLLGEMGKSNCKFWLVGGLGARGLLYHGLVGKLTAQAAISCDESLIPSEFTCWKVIF*