Information report for Oropetium_20150105_15399A
Gene Details
|
|
Functional Annotation
- Refseq: XP_021303528.1 — uncharacterized protein LOC8071259
- Refseq: XP_021303529.1 — uncharacterized protein LOC8071259
- TrEMBL: A0A1Z5R1M0 — A0A1Z5R1M0_SORBI; Uncharacterized protein
- STRING: Sb09g002290.1 — (Sorghum bicolor)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Panicum virgatum: Pavir.7NG164300.1.p, Pavir.3KG124100.1.p
- Setaria italica: Seita.3G048100.2.p, Seita.3G048100.1.p
- Setaria viridis: Sevir.3G048600.7.p, Sevir.3G048600.4.p, Sevir.3G048600.3.p, Sevir.3G048600.2.p, Sevir.3G048600.1.p, Sevir.3G048600.8.p
- Zea mays: GRMZM2G447745_P01, GRMZM2G089406_P01
Sequences
CDS Sequence:
- >Oropetium_20150105_15399A|Oropetium_thomaeum|MYB_related|Oropetium_20150105_15399A
TGTTCCCAGGATAGGAGGACAGAGGAGCTGCGGAGTTGGCTTCGCCTCGCGTATGTGACTCCCGGCGGCGGCCGGAGCTGGATACAGGCGCCGCAGGAACGAAGACGACGGCGCCGTGGATGCCGCCGCCGCCACCGGATCGGAGGGACTATTTGTTACTACCGTCAGGGCGGCGGCGCGTACGACCGCTCCTACCCTGACGAGATGCCGCCTGGCTACCCGCCGTCGCGCTCAGACCGCTATTGGATGGACGACGAAGGCGGCGGCTATAAGGGTTTCAGCCGTTGTGGCGGCGGCCGGAGAGATGGCCGTGACATGAGGGGCGGCTCCTACCGAAGGTCGCCGTTCAGGAGCTATGGGAGCGATTTCTCCAGAAATCATCAGGAGCAGCCTCCACCTCCGCCACCAAGGAGGTCGTCTCTGAGGTCAGTCGCCGTCCCGATCTGCTACGACTCTCCAGGCAATCGGGTTGACAGGGGGGACAGAGACAGCCTCCCACGGGTGACACCTTGGCGCCGGAGGGAGAGCAGATCTGAGGTTGCAGGGGGACATGCGTCTTCTGGCCAGAGCACTAGACCGGCAGCTTCAGAAAAGGAGGTTTCGCCCCACCCTCCTTCTCTGTCATCTCCTCGCGAGGCTGAGGAGGAGGCACCAAGGAAGAAGGCTCGGCTTGGATGGGGGCAAGGTTTGGCTAAATATGAGAAGCAGAAGGTGCATGGCCCAACAGATCCTGCTGAAGCTGTTGCTGATGGGAGCTTATCCAAAGGAAGTTTTTCCTGCACCTGCGGCATGCGCATCGCCGGTTGCTGTGCCACCACCTGCACCTGCGCACCTGAAGATAAATCCTGTGCACTGGCGGCAAATACTGTCCGGAAATCTGCTCAAGATGCCCCTGGCTCTGATGATCAAGCTTGCAACAACGAATTCCCGATTAAGATAGATCAGCTTGGTGGTGACCCTATTGATTCTCTTGCAAGCTTGCTTTCGAAATTTCTTCAGCATGATTCTTGTGCTGGGGATTCAAAAGATCCAACCAGTACAAGTAAGCTGCTATTACTGAAAGAAAGCATTTCCAAAGAGATTGAAAAGACTGAACTTGAGATTGATTCTTTGGAAGGCGAACTTAAATGTGTGACCACTGAGGCTGGAACAGCTCCCGAAGATTCTCCTACAGGTGTCACATATACAGAAAATGTTTCACATTCTACTGTGGCATCAAAAGTTCCTGGCAATTTGAAGATCTGTGCCAAGTCTCATGTGGAAGAACCCGGGGAGGTCAGTCCTTGCCCCAAGATGCCCGTGGTGCAGGATGCTAATTCAAAAGATGCTGAAATGATGGAAATTGAGACAGCTCCAGTTCAGAATGCAAAAACAGCCTCTTCAGAAGAGAGTGCTGCATGCCCTGGAGTTACTGAGGCTCATGCTCGCACAGCTGCTGCTGATGGCCCTTTGAAGGCCTCTGCACGAGCAAAACCTCATATCAATGTTGACATTGAGACGTTGGAAGCGTCTTCATGCCACATTGATACTAATTCTGTGAAGCCAGATGTCCTTCCTGGGAGACAATGCTTATACCCCAATCATAAGTATAATTTATTGAGTTCCCTTAAATCTTCCAATCATGATATAGCCAAAGTAGCGAATGAATTGGTATTTAAACACATGCCTGGTGATACACCGCAGCCTAATTTATTGGCATCCAGTCAATTTTCCACCTATAGTAAGAATGAGTCGGTTATCAAAGAGAGACTCGTTTTACACAAAAATAGGTTGAGATTCAAAGAGCAGGCTCTTACCTTCAAGTTCAGGGCACTGCGCTACTTGTGGAAAGAGGATGTGCGGCTACTTTGTGCAAGGAAGCAGCGTTCAAAGTCCAGTAAGCGCATTGATCAGAACAGCCGGACATCACATATTGGATCTCAGAGGCAACGTTCCACAAACCGCTCACGATTAGCCATGCCTGCTGGTAATTCAAGTATATTTCCCACTCCAGAAATATCGGATGTTGCAAACAAGCTGTTTTCGGAATTTCATATTAAACGCTGCAGAAATTACTTGAAAATGCCTGCACTGATTATAGATGAGAAAGAGAAGGAATGCTTGAGGTTTGTCAGCAAGAATGGTTTAGTGGAGGATCCTGTTGCAGTTGAGAAGGAGAGGGTTCTGATAAACCCATGGACTCAAGAAGAGAAGGAAATGTTTATGGAGATGCTTGCTAAGTTTGGCAAGGATTTCTCCAAAATATCCAGTTTCCTTGCACACAAAACAACTGCTGATTGTGTTGAGTTTTACTACAAGCATCATAAATCTGAAAGCTTCCGAGAAGTGAAGAAACTTCTGGATCAGCGTCAGCAGCAGCCTTCGAGCAATTTTCTAGGAGCTAAATCTGGAAAGAAATGGAATCGTGAGGCAGATGCTGTGTCTCTTGATATTCTTGGGGTAGCATCAGCAGTAGCAGCCCAGGGCCTTGAATATGAAAAGAAAGCAGTGAAAATTTCTACAAAATCTCTCATTCGGAATGGGTCTAATGTTTCTTTCGCAGCGAGAAAATCCAACAGAGAGTGCCTTGATAATATATCTTTGCATGAGAGGGAATCTGTTGCTGCAGATGTATTGGCAGGCATATGTGGCACTCTCTCCCCAGAAGGAATGAGCTCATGCATTACAAGTTCTGCTGATCCTGGACAGAAGATTAGCATTACAGGAATAGAACATATCTTGACCCCGGAAATTGATAAAAGTTTTGATGAGGAAGACACCATCCCTGATCAAGAGTGTGAAGTTGATCCAGTTGATTGGAATGATGATGAGAAATCAATTTTCGTTGACGCCATGAACAATTATGGGAAGGACTTTGCTCGGATTTCATCATGTGTGAAGAGTAAGTCGTATGAACAGTGTAAAGTATTCTTCAGCAAGGCTCGAAAATCACTTGGGTTGGATTTGATCCATCATGGGACAGCTGATGTCACCATGCTGACTAGTGATACCAATGGAGGGAGGAGCGATACTGATGAGGCCTGTGCTGCTGAAATGGACTCGGCTATTTGTAGCACACAGTTATTTGCAAAGACAGAGATGGATGTATGCCCTACTAAAAGTGCCATTCAGGGGCCTAATTCGTGTATCATCTCTAAACAGACGGAAGGTGATGTATCAAAAGGTTGTGATGTTTCAGATGTTAAAACCGAGAGTGAGGATAAAGCAGATCAAACTTGCAGTGTTGATGATCATAAACGATTCAGTGAAGTGACTCATGAACCAACATGTGGATCTATTGATATCAACTGTCCTGAAACCACAGAGAAGCTCGAAGGCGAAGATGATACTGTCGACCAAAGGAATATAAATGGCTGTAGTACTGTCAGCTCTTCAAAGGAGCAGGCTGTGTTGGTGAACTCGGAGACCAGGATGGATGGAGGTTCACACCATGCTAATGCACTAGTGAAAGCTGGAAAATTTGGCCCTCCAGCTAGTGTAGTTGCAGAGAGTGGTATTAAGGAAAATGTTCACTTCTCAAAAATGACTGATGCTTCCTCCATTAATGCTGTCTCCACTTCTAGTTATCAGCACTCCATGACAGGAGACAAGCCCCCTTCAAAACCAAAGCCACTGGTCACGCCCCTTACTCCAAAGGATTTAATGCCTGTGCAGTTCAGTTCTGTCCTTCCTGATCCTACGTCAATTCGTTTTGAGGGCATAGCTTCAATTACTACGTCAAACTTTGAGGACACTGGCAACATGAACAATTACCCAGCTTTAAAGGACCAGTCTCAATCTGGTAATCAGAATGGCACATTGTTTCGCAACATTGATGGTTACTCGAGTCACCATCTAACCACTGAGTCACCAATTGTTTCTGAAAGAAATGCGAGTAGCGCTGTGAGCACTTCACATACTGATCGGTTCACTATAACAAAATTTCAGAATGGAAGGTCCAGCAGCTTGGACCTTCCTAACACTACTGATGGGATTCACTGGGACAGAAAACACAATGAAGTATCAGATGTTTCTTTCAGGCCTTGCTCTCGTAATTCAAGTTCTGAGGGCAACGAGCAGGTAAAGCGACCGGGTGATGTAAAGTTGTTTGGTCAGATTCTCAGTCATCAATCCTCCTCGCAGAATTCTGCTTCATGTAATGGTACCAAAAACAATCCAAGAGATCGTGTGTCTTGTTCTTCAAGGCCTGCAGTCACCCCGCATTTGGGACTGGAGGATAGATCAGTGAGGAGCTATAGTCATCTAGATGGATGTACAGCACAGCCACTTGTGATGGCGAAGTGCCAGGCGTCCTTAGCCGGCGTACCATTTTACTCTGCTAAAAGTGGTATCTTTTCAGATTATCAACAGCCTTCAATGCAGGCACATCAATCAGATCCAAAGCGGCTAGAAAGATTTTCTGATCCTCAGAAGAGAAATGGTATGGAACTAATATCGGGTTTCCAGCAGCCTGGTAAAGGCAATCGTTTTGGTGGTGCTGGTATCCTTGTTAGTGGTGTTTCAGACCCTGTGGCTGCTCTCAAGGCACAGTATGGTCCTGGTTCTAAAATTACGAGCTGTGATGTGGATCCTTGGAAGGACATAGGAAGCAGGTAG
Protein Sequence:
- >Oropetium_20150105_15399A|Oropetium_thomaeum|MYB_related|Oropetium_20150105_15399A
CSQDRRTEELRSWLRLAYVTPGGGRSWIQAPQERRRRRRGCRRRHRIGGTICYYRQGGGAYDRSYPDEMPPGYPPSRSDRYWMDDEGGGYKGFSRCGGGRRDGRDMRGGSYRRSPFRSYGSDFSRNHQEQPPPPPPRRSSLRSVAVPICYDSPGNRVDRGDRDSLPRVTPWRRRESRSEVAGGHASSGQSTRPAASEKEVSPHPPSLSSPREAEEEAPRKKARLGWGQGLAKYEKQKVHGPTDPAEAVADGSLSKGSFSCTCGMRIAGCCATTCTCAPEDKSCALAANTVRKSAQDAPGSDDQACNNEFPIKIDQLGGDPIDSLASLLSKFLQHDSCAGDSKDPTSTSKLLLLKESISKEIEKTELEIDSLEGELKCVTTEAGTAPEDSPTGVTYTENVSHSTVASKVPGNLKICAKSHVEEPGEVSPCPKMPVVQDANSKDAEMMEIETAPVQNAKTASSEESAACPGVTEAHARTAAADGPLKASARAKPHINVDIETLEASSCHIDTNSVKPDVLPGRQCLYPNHKYNLLSSLKSSNHDIAKVANELVFKHMPGDTPQPNLLASSQFSTYSKNESVIKERLVLHKNRLRFKEQALTFKFRALRYLWKEDVRLLCARKQRSKSSKRIDQNSRTSHIGSQRQRSTNRSRLAMPAGNSSIFPTPEISDVANKLFSEFHIKRCRNYLKMPALIIDEKEKECLRFVSKNGLVEDPVAVEKERVLINPWTQEEKEMFMEMLAKFGKDFSKISSFLAHKTTADCVEFYYKHHKSESFREVKKLLDQRQQQPSSNFLGAKSGKKWNREADAVSLDILGVASAVAAQGLEYEKKAVKISTKSLIRNGSNVSFAARKSNRECLDNISLHERESVAADVLAGICGTLSPEGMSSCITSSADPGQKISITGIEHILTPEIDKSFDEEDTIPDQECEVDPVDWNDDEKSIFVDAMNNYGKDFARISSCVKSKSYEQCKVFFSKARKSLGLDLIHHGTADVTMLTSDTNGGRSDTDEACAAEMDSAICSTQLFAKTEMDVCPTKSAIQGPNSCIISKQTEGDVSKGCDVSDVKTESEDKADQTCSVDDHKRFSEVTHEPTCGSIDINCPETTEKLEGEDDTVDQRNINGCSTVSSSKEQAVLVNSETRMDGGSHHANALVKAGKFGPPASVVAESGIKENVHFSKMTDASSINAVSTSSYQHSMTGDKPPSKPKPLVTPLTPKDLMPVQFSSVLPDPTSIRFEGIASITTSNFEDTGNMNNYPALKDQSQSGNQNGTLFRNIDGYSSHHLTTESPIVSERNASSAVSTSHTDRFTITKFQNGRSSSLDLPNTTDGIHWDRKHNEVSDVSFRPCSRNSSSEGNEQVKRPGDVKLFGQILSHQSSSQNSASCNGTKNNPRDRVSCSSRPAVTPHLGLEDRSVRSYSHLDGCTAQPLVMAKCQASLAGVPFYSAKSGIFSDYQQPSMQAHQSDPKRLERFSDPQKRNGMELISGFQQPGKGNRFGGAGILVSGVSDPVAALKAQYGPGSKITSCDVDPWKDIGSR*