Information report for orange1.1g047353m
Gene Details
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Functional Annotation
- Refseq: XP_006450634.1 — transcription factor MYB3R-1 isoform X1
- Refseq: XP_024034229.1 — transcription factor MYB3R-1 isoform X1
- TrEMBL: V4WBV5 — V4WBV5_9ROSI; Uncharacterized protein
- STRING: XP_006450634.1 — (Citrus clementina)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0003677 — Molecular Function — DNA binding
- GO:0003713 — Molecular Function — transcription coactivator activity
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Fragaria vesca: mrna08793.1-v1.0-hybrid
- Gossypium hirsutum: Gh_A07G0175
- Juglans regia: WALNUT_00025554-RA
- Manihot esculenta: Manes.07G099800.1.p
- Populus trichocarpa: Potri.006G241700.1, Potri.018G038000.2, Potri.018G038000.1
- Prunus mume: XP_008220039.1
- Prunus persica: Prupe.1G452000.1.p, Prupe.1G452000.3.p, Prupe.1G452000.2.p
- Ricinus communis: 29794.m003447
- Ziziphus jujuba: XP_015885201.1
Sequences
CDS Sequence:
- >orange1.1g047353m|Citrus_sinensis|MYB_related|orange1.1g047353m
ATGTTGACATTGTCAGCTAATTGTCATATATGTAATCAGGAGGATGAGATAATAATTGAATTGGTGAACAAATATGGGCCAAAAAAGTGGTCCACCATTGCTCAGCATTTACCAGGCCGTATTGGTAAGCAATGCAGGGAAAGGACAGACAATGCAATAAAAAATCACTGGAACAGCTCTGTGAAAAAGAAGTTGGACTCTTACTTGGCTTCAGGACTATTGGAGCAGTTCCAGGGCCTGCCTCTTGTTGGACATCAAAATCAACCTTTGCCATCATCTTCACAAAGGATGCAAAGTAGTGGAGATGAAAGTTGTCCTAAAGGTGGAACAGAAGGAGAAGAAGTATCAGAATGCAGTCAAGAGTCAGCAGGTGTTGCACACACTCATTCTGCTGGTAATGTGGTGCTACAAACGAGAGACCAGTTCATTTTTAGTGAAGAGTCGTGTCCAGGGAAGGATCGAAGCTCCAGTCCAGCATCTTGTACAGAACAATATTACACCTCACTTGAAGATGTCACTTTTTCCATTCCAGAAATACCTTGTGAAGCTGGCTGCTCTTCTAAGTTCCCTGAACAAAGTTTTGTCAATAATGCTGGGTCTTTTGCAAGCACACCTTACCAGTTTAATTTACAGGATGTATCAAACTTTTCGGCACTCGAATTGGGACATCAATCAGCGGGGTTGCCAGCTCATTGTATAAGTTCTCATGAAGGCCATGAAGTTGCTAATGTTCCATTCCAAAGCTCTATGGGACTTAGCGTTCCTAGTTCTGCTGGAAATCTAGCAGCTGGTTCAGCTAAACCAGAGAACATGTTGATATCAGATGATGAATGTTGCCGGGTCTTATTTGCAGAGGCAATGAAAGATGGATGTTTTTCCTTGGAAAATCTTCCACAAGGATTGAATATTGTTGACTCACTACTCTGCCGATCTTTGGATGTGCCAATATCTGAAAGTGACAGAACTTCATCCTCACAAGCTTTTTGTCCTTTAAGGCCAGAATTATTAGGAACTTCATGCAGTCAATCTTTTTTGTCTGGTCCAATGCTACTTTTGCCTGATGACAGTGGTTTCCTATATGGTCGAGAACCCAGTCAGTTAAATTGTCATTCTTATGGAACTCAAGAACAAGAACTTAATACAAATGGACAAGCTGGCTTTATCTGTACCAATGAATCTACCAATTCCCCTTGTGATGATGGTACTGATAATAGTGGCCTGCAAGAGTCATCATATCTTCCAAAGGATTCTTTGAAACTAGTTCCTATAAATACTTTTGGTTCAGGAGCAGATGCCATGATAAGTTGTCCTTCTGTAGAGGTTAAGCAAGAAGCACAAACAGAACAGCAGGATTCAGGAGCTCTTTGTTATGAACCTCCTCGTTTTCCTAGTTTGGACATTCCATTTTTCAGCTGTGATCTTATACAATCTGGTAATGATATGCTGCAAGAGTATAGTCCACTCGGTATCCGCCAGTTAATGTCATCAATGAACTGCATAACTCCATTTAGGTTATGGGATTCACCTTCTCGGGATGGTAGTCCAGAGGCTGTGCTGAAAAGTGCTGCCAAAACTTTTACAGGCACACCATCCATTTTGAAGAAACGAAACCGTGACTTACTTTCACCCCTGTCAGATAGAAGGAATGACAAAAAGCTTGAAACCGACTTGACATCCTGTTTGGCCCGTGATTTTTCTCGTCTAGATGTTATGTTTGATGATGGCGGGGCTAACAAAGCATCTTTGCTGTCCCCATCATCTAATCAGAAGAGAAATTCTGGATCCTTCATTGAAGACAAAGAAAATCTCAGTGGTGGTCAAGAGAAGGATAAAGATATCATTGTAAAAGACAAAACTTCTGAGAAAGATTTTGATGGTAGCAATTCCCAGGAAAACATGAAGCCAAAGACTGTTGATACTGATTCTAAGACCAAGATTGATGCTGATGCCGCTTCTGAAACCGTGAAAAAGCCTGCTAGCATCCTTGTTGAACATAATATGAATGATCTGCTATTTTCTCCTGATCAAGTTGGTTCCAAAGCAAATAGAGCACTGGGGTCACTTGCTCGAACTCCAAGAACTCAGTACTGTAAAGGCTTTGGGGTGACAGCAAATCAAGGTTTTTCCTCCGAACAATCACCTAGGAATACAAGTTCTCCGGCAGTGTGCAAAAGGAGTAATGAAAGTAGTGCCGGTGCAGTTGCTTCAGTACAAGCCATTCCATCGTTGGCGCTGACGGGAGAGACAACTACTACTGCTGGGAATGATGCTGGCACTGAAAACTATAACATATTTGGTGAAACTCCATTCAAAAGAAGTATAGAATCACCTTCAGCATGGAAGTCCCCTTGGTTTATTAACTCTTTTGTGCCAGGTCCAAGGGTTGATACTGAAATATCAATTGAGGATATTGGTTATTTTATGAGCCCAGGCGATCGAAGTTATGATGCCCTTGGATTAATGAAACAGTTGAGTGAGCACACTGCTGCTGCATATGCAGATGCACTAGAGGTCTTGGGAGGTGAATCCTCTGAAACACTAGTGAATGAAAGGAACTCCAAAAGTCCAAGCATGGACCAAGGGATCGAACATCTGCCAGAGAATGAAAATGAGAGTTCCCATTTGGACTCAAATGTTATGATGGAGCGGCGCACTCTTGACTTCAGTGAATGTGGGACACCTGCAAAGGGAACAGAAACTCGGAAGTCCTTGACTGGCGTAAACTTCTCAAGTCCCTCTTCCTATCTGTTGAAGGGTTGCAGATAG
Protein Sequence:
- >orange1.1g047353m|Citrus_sinensis|MYB_related|orange1.1g047353m
MLTLSANCHICNQEDEIIIELVNKYGPKKWSTIAQHLPGRIGKQCRERTDNAIKNHWNSSVKKKLDSYLASGLLEQFQGLPLVGHQNQPLPSSSQRMQSSGDESCPKGGTEGEEVSECSQESAGVAHTHSAGNVVLQTRDQFIFSEESCPGKDRSSSPASCTEQYYTSLEDVTFSIPEIPCEAGCSSKFPEQSFVNNAGSFASTPYQFNLQDVSNFSALELGHQSAGLPAHCISSHEGHEVANVPFQSSMGLSVPSSAGNLAAGSAKPENMLISDDECCRVLFAEAMKDGCFSLENLPQGLNIVDSLLCRSLDVPISESDRTSSSQAFCPLRPELLGTSCSQSFLSGPMLLLPDDSGFLYGREPSQLNCHSYGTQEQELNTNGQAGFICTNESTNSPCDDGTDNSGLQESSYLPKDSLKLVPINTFGSGADAMISCPSVEVKQEAQTEQQDSGALCYEPPRFPSLDIPFFSCDLIQSGNDMLQEYSPLGIRQLMSSMNCITPFRLWDSPSRDGSPEAVLKSAAKTFTGTPSILKKRNRDLLSPLSDRRNDKKLETDLTSCLARDFSRLDVMFDDGGANKASLLSPSSNQKRNSGSFIEDKENLSGGQEKDKDIIVKDKTSEKDFDGSNSQENMKPKTVDTDSKTKIDADAASETVKKPASILVEHNMNDLLFSPDQVGSKANRALGSLARTPRTQYCKGFGVTANQGFSSEQSPRNTSSPAVCKRSNESSAGAVASVQAIPSLALTGETTTTAGNDAGTENYNIFGETPFKRSIESPSAWKSPWFINSFVPGPRVDTEISIEDIGYFMSPGDRSYDALGLMKQLSEHTAAAYADALEVLGGESSETLVNERNSKSPSMDQGIEHLPENENESSHLDSNVMMERRTLDFSECGTPAKGTETRKSLTGVNFSSPSSYLLKGCR*