Information report for orange1.1g042386m
Gene Details
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Functional Annotation
- Refseq: XP_006424852.1 — telomere repeat-binding protein 5 isoform X3
- Refseq: XP_006488346.1 — telomere repeat-binding protein 5 isoform X3
- Swissprot: Q6R0E3 — TRP5_ARATH; Telomere repeat-binding protein 5
- TrEMBL: A0A067GBF3 — A0A067GBF3_CITSI; Uncharacterized protein
- STRING: XP_006424852.1 — (Citrus clementina)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Gossypium arboreum: Cotton_A_18578_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D03G1191, Gh_A03G0363
- Manihot esculenta: Manes.02G131200.1.p, Manes.01G172100.2.p
- Populus trichocarpa: Potri.009G032000.1, Potri.009G032000.4, Potri.001G241600.1, Potri.009G032000.3, Potri.009G032000.2
- Prunus persica: Prupe.6G074100.2.p, Prupe.6G074100.1.p
- Ricinus communis: 28880.m000016
- Ziziphus jujuba: XP_015874013.1
Sequences
CDS Sequence:
- >orange1.1g042386m|Citrus_sinensis|MYB_related|orange1.1g042386m
ATGGTGTTGCAGAAAAGGTTAGATTACGGATTTAATGGCTATCAGGTGCCTTATACACCTCGAGCCACCAGATCAGCTAGGAAGAGGTGTTCGTTCAAGAAAAGAGCTGAAGACAATCAAATGTGTGCATTTGACTTATTGGCCACCGTAGCTGGAAAGTTATTGCTTGAGAAACAATGTACTCCTAGTTCCAGTAACACACCTAGTGATGAAGATCAGTCTGCAGTTGCAAAAGAGATTGAGCAAAAAGCAATGCAGGACGAAAACAAACAATTGAAAGTAGAAACATGTGATCAAGGGAGCTGTGATAGGGGATTCTTTGTCTCTGATCTTGTCTCACAAGCTCATGATCAGAAATGTAGTCTTAAGCCACCATCATGTCAACAGGCTGATGCCCATCCTGGATTTGCCTCAGTAATAACAACTTCTGATTGCTCTGAGGGGTTTGGTGATCAGAAGTTGGTGAATGGCAAACCCAAGAATGAAATGGGAACTTTAGCTAGCAAAGTAGAGGTGGGTCCATCTGGGTACATGGGGTATGGTAACTGTAAAGTAGAGGCCGAAACTAATAAGTTTATGAAAGATGAGTCACATAAGACTGCAAAGGTGCAACTTGGTACTAGGGCTGATGGGTGCAGTTTTGAGGATCCATTGGTTTGGGATGGGAAACCTCCTGCAGTTAGTTCAGATAGTAGTGCCAAGGCGCCTTTGTGCGGGGACCACAGTCCCCATATTTCTTTTCCTGCTAGCCAGGATTATGTAAATGTAGTTAGTAGAGATGATGACGAAAATTCCTCAGGGTGTACTCACCCTAACACCACCAAAAGGTCCTTTAGGCCAGCACCACGTATTGGGGACAGAAGAATAAGGAAAATATTGGCATCTAAATATTGGAAAGTAGCTCCAAAATTGAAGGATGCAACACTTTCCAATACTGTTCTGATGGTTTCAGATGGTGATCTAAAGACCGTTTACCATAATAGGAATAGCTATTACAGAAGTATAAGATCTGAAAGGAATTATCCAATCAAGAAAAGGAGACTTTTTAACTGTAGCTCAGTACCAAATTATGATCGAAAAATTCGTAGTGAGGGTATTTGTGTTTCACCTGAGAGATGCATCAATGGAGATGTTTCTGCTTTGTGTGCAAAGATGCATGAAGTGACTGGCGCATCATCTTCAGTGGCAGGTTCACACACATCATTTCAATCTAGGGATTCTCACGTGAAACTTAGGATCAAGTCTTTCAGGGTGCCAGAGCTTTTTATTGAACTACCAGAGACTGCAACTGTTGGTTCTCTGAAGAGGAGGGTTATGGAGGCAGTGAATGCTATTCTTGGAGGCGGATTACGCGTTGGCGTACTTCTTCAAGGAAAGAAGGTCAAAGATGACAACAAAACACTACTTCAGACAGGGATTTCTCATGATAACCAGAAGGATGTTTTGGGTTTTAGCCTGGAGCCTAAGACTTCACAAACTCCCCCACCATTGTGCAGTGGAGATTCTCCCTTTATGCTTCCCTCCAATGCACCTCAGCCTCTTGCCAGGTATCCACCCGCTCCAGGTGTTGTTCACCAGGGAACTTGTGATGCTGTGCCTGAGCTGCAAATGGCCAATGCTGTCAACTTTATTGAAAGTGATCATGATTCAGCACCCTCTCCTACTGACATGTCAATAGACAAAAGCACAAAGGACTCTAAAGCACTGGTAACTGTTCCAGCAATGAGTGTGGAGGCACTGGCTGTGGTTCCAGTGCACCGGAAATCCAAGCGATCCGAAATAGTGCAACGCCGAATTCGTCGACCTTTCTCTGTTGCTGAAGTTGAAGCTCTTGTTCAAGCTGTTGAGAAACTTGGGACTGGAAGATGGCGTGATGTTAAACTGCGAGCTTTTGATAACGCCAAGCATCGAACTTATGTGGATTTGAAGGATAAGTGGAAAACACTAGTGCACACGGCAAGAATATCCCCGCAACAAAGGCGAGGAGAACCTGTGCCACAAGAACTCCTTGACAGGGTCCTGACTGCCCATGCTTACTGGACTCAGCAGCAAGCGAAACAACAATTCAAGCAGCAGCCTGAAACTTGCCTTCTCCTTTGA
Protein Sequence:
- >orange1.1g042386m|Citrus_sinensis|MYB_related|orange1.1g042386m
MVLQKRLDYGFNGYQVPYTPRATRSARKRCSFKKRAEDNQMCAFDLLATVAGKLLLEKQCTPSSSNTPSDEDQSAVAKEIEQKAMQDENKQLKVETCDQGSCDRGFFVSDLVSQAHDQKCSLKPPSCQQADAHPGFASVITTSDCSEGFGDQKLVNGKPKNEMGTLASKVEVGPSGYMGYGNCKVEAETNKFMKDESHKTAKVQLGTRADGCSFEDPLVWDGKPPAVSSDSSAKAPLCGDHSPHISFPASQDYVNVVSRDDDENSSGCTHPNTTKRSFRPAPRIGDRRIRKILASKYWKVAPKLKDATLSNTVLMVSDGDLKTVYHNRNSYYRSIRSERNYPIKKRRLFNCSSVPNYDRKIRSEGICVSPERCINGDVSALCAKMHEVTGASSSVAGSHTSFQSRDSHVKLRIKSFRVPELFIELPETATVGSLKRRVMEAVNAILGGGLRVGVLLQGKKVKDDNKTLLQTGISHDNQKDVLGFSLEPKTSQTPPPLCSGDSPFMLPSNAPQPLARYPPAPGVVHQGTCDAVPELQMANAVNFIESDHDSAPSPTDMSIDKSTKDSKALVTVPAMSVEALAVVPVHRKSKRSEIVQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWTQQQAKQQFKQQPETCLLL*