Information report for orange1.1g005228m
Gene Details
|
|
Functional Annotation
- Refseq: XP_006421445.1 — uncharacterized protein LOC18031662 isoform X1
- Refseq: XP_006493906.1 — uncharacterized protein LOC102627827 isoform X1
- Refseq: XP_024037365.1 — uncharacterized protein LOC18031662 isoform X1
- TrEMBL: A0A067DQX6 — A0A067DQX6_CITSI; Uncharacterized protein
- STRING: XP_006493906.1 — (Citrus sinensis)
- STRING: XP_006421445.1 — (Citrus clementina)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_24231
- Capsicum annuum: CA10g19550
- Cicer arietinum: XP_012567479.1, XP_004516067.1
- Glycine max: Glyma.04G004700.1.p
- Juglans regia: WALNUT_00021724-RA
- Manihot esculenta: Manes.09G026400.1.p
- Populus trichocarpa: Potri.016G053300.2, Potri.016G053300.1
- Prunus mume: XP_008240866.2
- Ricinus communis: 27810.m000638
- Solanum tuberosum: PGSC0003DMP400041040, PGSC0003DMP400041042
- Vitis vinifera: GSVIVT01033321001
- Ziziphus jujuba: XP_015899006.1
Sequences
CDS Sequence:
- >orange1.1g005228m|Citrus_sinensis|MYB_related|orange1.1g005228m
ATGTTGAGCCGTGACAATCTTGTTTGTCAGACATCAGCTTCTGATCTGAATATTGCTGGACCTGAGCTTTTGAAATGGGATGTCCATCCCTTTATTATGCATAAAAGAGCTTTGATGCCTAAATGTGCCTTACAACACCTGAAAGATACAATTCTTGAAGGAACACATCCATTGGCTGCCTCCTTGAAGGAAACCAGTGGTTTGACGTGTGTAAGTGAGTGTGGCACAGCTCGTGTTGGTGATCTCGATCATAATGCCCAGGCAATGTCAGAAAAAGAGAATTTGCTTCCTTCAACATGTGAAAATAGGGATGGACAACCTAGAGATAATTTGCATATCAGAAATATGTTGCCTTTTAAGAGGAGTAGGGGTGACATGGCTATCAGAGATGTGGCAGCACACACCAATGGAGTCCAGGAGAAGTGTGATCTCAATTATAATGCCAAGAAGCATAAGCAGGATGCAATTAGTAACCATCAGTCTGCAGATCAGATATCAGTTCCTACCTGTGGCAAAGAAACGGTGGAACCTCTTTCTGGAAGAGATGTTGCAGTGGCTGGCAGAGAAGGTTCCCATTTTTCAAACCAATCTCAAGATGCAGGCTTGGAGGAAAGCCAGTTTCCGGATGATGGTTGTGACAATTGCGATGACTTGAGGAGGCTTGGGCAGAATGGTGATGTTAATGATGACCAAATCCAGCATAATCAAGCAGAGGATGGCCATAATGCTGCCAGACTGCCTCGAGCCGAACCTGTTCAAAATGCAACAGTGGATGAAGCCAATATTACTGAACGCGTACCCTCTGTGGGTACTCAACACGAAGATACTGAGGATGAGTCTAGAGGTGAAGTGGAACATTCTTGTGAAGAAGAAACATTGAGTGATAATGATGCATACCATAATGATAGAATTGATGTTGCTGTGAAGAAAAGTCATTTTTTGAGCTCCCAAGCTGCATTAGGTCATGATTCCTTGGCTACGAGTGGGTGGACAGAACAAAACCTTTGTGTGAAGTGTAACAAGGATGGTCAGTTGCTATCTTGCAGCTCCAGTACTTGCCCACTAGCGGTGCATGAAAACTGCTTGGGTTTTCCCGTAAAATTTGATGAAAAGGGAAACTTTCATTGCCCTTTTTGTGCATATACTCTCTCCATTTCAGAGTACCTTGAAGCCAAGAAAAGAGCTTCTGTGGCAAGGAAAGAACTAGCTGCATTTATGCAAATGGGCTCTGTGTGTCATCAAATGGACCTTGCCAATAAATTACACAGCAAAGACCCAGGTCATTCAGGAAGCAATGGAGATAAAGACATTCATGAAAATGGGAATGTGGGAGAGCAAGAAAACAACCAAGAAAATCAAAATGGTCAACATTTACATGATGTTAGTGACCAACTATGTCAGAAACATAGAGCTAAGAAGAAAAAGGCAGAGCCTTTACATGATGTTAGTGACCCCTTATGTCAGAGACATAGTGCTAATAAGAAAAAGGCAGAGACTTCTGCATCATGTGTTAATGCCAATTCACCTTGTAGAGAAGAAGAGGCCAATGCATTTAGTGGGAGAGATTGTATCTCTAATGGAGATAAGGTAGTGGAAGAAAATATGGATAATTACTGCCCTTCTGAAAGAGGACTTGAAGGTCAACCAGAACGCACACCTCCTGAGTGTGGTAAACTAGCCTGTACAAACACATATGTTGAGCCTATGGATGATACAGAAGCTGAAGCCAAACTTCAGAAGGAAGATGTACAGCCTGCAAGTAGTGAATCTAGTGATCCACCAGAAAGTCCTGTTATTGCTCTTAATATTGATGAAGAGGAAATTTCTGAAAGTGAAGATGATAAGTTTATTATCTCTAATTACTCGATACGATTCCGAAGGCCGAAAACGCATTACACATACCCACCTATTCCTCAGTTGAGACGAAAGAAAGTTCCGTGGACAGCTAAAGAGGAAGAGATACTTAAGAAGGGAGTGCAGAAATTTGCTAGTGTTGACGACAGAATTATCCCATGGAAGAAGATATTAGAATTTGGTAGTTCTGTGTTTTTCAGTGGTCGTACAGCAATAGACCTGAAGGATAAGTGGAGAAACATGTGCAAAGGAAGCCCAAGGTCTAAATGA
Protein Sequence:
- >orange1.1g005228m|Citrus_sinensis|MYB_related|orange1.1g005228m
MLSRDNLVCQTSASDLNIAGPELLKWDVHPFIMHKRALMPKCALQHLKDTILEGTHPLAASLKETSGLTCVSECGTARVGDLDHNAQAMSEKENLLPSTCENRDGQPRDNLHIRNMLPFKRSRGDMAIRDVAAHTNGVQEKCDLNYNAKKHKQDAISNHQSADQISVPTCGKETVEPLSGRDVAVAGREGSHFSNQSQDAGLEESQFPDDGCDNCDDLRRLGQNGDVNDDQIQHNQAEDGHNAARLPRAEPVQNATVDEANITERVPSVGTQHEDTEDESRGEVEHSCEEETLSDNDAYHNDRIDVAVKKSHFLSSQAALGHDSLATSGWTEQNLCVKCNKDGQLLSCSSSTCPLAVHENCLGFPVKFDEKGNFHCPFCAYTLSISEYLEAKKRASVARKELAAFMQMGSVCHQMDLANKLHSKDPGHSGSNGDKDIHENGNVGEQENNQENQNGQHLHDVSDQLCQKHRAKKKKAEPLHDVSDPLCQRHSANKKKAETSASCVNANSPCREEEANAFSGRDCISNGDKVVEENMDNYCPSERGLEGQPERTPPECGKLACTNTYVEPMDDTEAEAKLQKEDVQPASSESSDPPESPVIALNIDEEEISESEDDKFIISNYSIRFRRPKTHYTYPPIPQLRRKKVPWTAKEEEILKKGVQKFASVDDRIIPWKKILEFGSSVFFSGRTAIDLKDKWRNMCKGSPRSK*