Information report for OMERI03G32960.3
Gene Details
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Functional Annotation
- Refseq: XP_015632482.1 — TSL-kinase interacting protein 1 isoform X1
- TrEMBL: A0A0E0D7I3 — A0A0E0D7I3_9ORYZ; Uncharacterized protein
- STRING: ORUFI03G37210.1 — (Oryza rufipogon)
- GO:0006412 — Biological Process — translation
- GO:0005634 — Cellular Component — nucleus
- GO:0015935 — Cellular Component — small ribosomal subunit
- GO:0003677 — Molecular Function — DNA binding
- GO:0003723 — Molecular Function — RNA binding
- GO:0003735 — Molecular Function — structural constituent of ribosome
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Panicum virgatum: Pavir.J300000.1.p, Pavir.9NG849600.1.p, Pavir.9KG521200.1.p
- Setaria italica: Seita.9G473800.1.p
- Setaria viridis: Sevir.9G477500.1.p, Sevir.9G477500.2.p
Sequences
CDS Sequence:
- >OMERI03G32960.3|Oryza_meridionalis|MYB_related|OMERI03G32960.3
ATGGGACACTCCAACGTGTGGAACTCGCACCCCAAGAACTACGGCCCCGGATCCAGGGTTTGCCGTGTTTGCGGCAACCCGCATGGCTTGATCCGGAAGTACGGGCTCATGTGCTGCAGGCAGTGCTTCCGCAGCAACGCCAAGGACATTGGCTTCATCAAGGTTGGCTCGCTCGAGCTCGGCTCGTTCACCGCCCTTGGTCCCAAATTCCCCTCCGCCGCTCACCGCCTCTCTCTCCATCTCACTAGCTCCGGCGGCGAGCATGCCCTAGCTTCGTCTCCATCGCACTCGCGGCCTCCTCGAGCAGGTTTGGATCCAGAGGCGACGCCGCCGGCCTCCATCGCATCGCGGTTCGAGTCGAATCGAATCGAAGGATCAAGAAAAATTGGGGGTTCAGCTGAGCTCTATGCCCCAAGTGAGGTCTGCCTCTGCCGAGAAGCCGATCGGCAATGGGCGGCATGGACACGACAAGAGGAACAGAGCTTTTTCAATGCTCTGCGCCTGGAAGGAAAAAATTTTGAGAAGATCACGCTCCATGTCCAGAGCAAAAACAAGGATCAGGTCAGACATTATTACTATCGTCTTGTTCGACGCATGAAGAAACTTCTTGGTCCTGAGTTCTCACTTGATGCAAAAAATTCGAAGGACATTGTTGCTGCTATGCTCTGCTGGTGGTCTCTGCTTGAAAAATTTAGTTGCAGTGCATCAAAACTGCATCTGAAGCCTCGGAGATTCAAAACATTCGTGGAAGCATTGGGAAATCAACTGCTAAAGGATAGGAATAAAACCAGAAAAAAGTGTCCACGAGGGGATGTGTGCCTTTCTTCTTCATCTCCAATTCTGAACAGGACTCCGGGAAATGAATCTTCCTCAGTAAAACTCCTACCTGTGGATGTCTCAAATGGTAGCAAAGTAGCATCTTCGAAAGGGGCAGTTTTCAAGCGGGGTGCAGAACCAAATTCCAATAACAAGTCAGGTTCAACTAAAGGGGACCTCTCTGCCACAATTACCGTGAAACAGAAAAAGAGAGCAGGTGGTGGCGTTGCATCTGCTGCATATAGAAAATGGGAGAGAGATGCCATGGCTGGTGTTTCTTTAGTCGCTGATGCAGCTGAAGAGCTCGAGCGCAACACAGTGAATGTTGATGCAAGAATGTTATCTCCCTCACCAAGCAATGTTTGTACTGTTGATGGTCCCGGCACAAATCATATGAATGAAGCAGATAAACAAGCACCTGCAAAGCTGAAGTTGCAGTTATTTCCAATAAATGAAGCCACACAAAAGGCATTGGAAAAGGATGAACATAATCCACATCTGGAACTCACAGTAAGCGCTAGGAAGAAAATATCTTCTGTACTAGAACATCTTAACCGCAAGTGGGGCAGCTCAAACATTGCGTCTGGAGAGCTTTTGCTTTTTCCATATTGTGCTAACCAAGAAGATTTAGCTACCTATCAGAGATGGACCACAAGAGATACAGTTGTGGTGGCTGATGTTTTTCTTTCTGTGAATAGTCCGCCTGTTTTTCGATTAAGGTATGGTTGGTTTTCCCTTGCTGAGCTTGAAGGAGGAAGTGGAATATCTTCAACTCATTTTAAGAATTGCATGATACCTGAAGACATCCATGCCAAATCTCCCTCAGAGGCTTGTGTGCAGAAGGATGGTACTTTTCTCAGTAGTTGTGCTCCTGATGAACACCTTTGTAATTCAAAAGATCGGTCGGCATTATTTCTTGCTATGACATTTAGTACAGGCAAGAGCGCTAAGGGGCAAGAGCTGCACAGTGATTTCCCCACCTCATGGTTTAGCAGGCAGAAGCAAGAAAAAGTTTCCACAAACCAAGCTAATCTAGGGATGGATTGTGCTATAATATCTGAAGGAGAGTGGGCAGATACCCTTACTGATATCAGTGTTGGATACTTATTAACAGAAGCATCCGTAGGCACTAATACAGATTGTCCAGGGACAGCTATTGCCAAAAACACATTGTTTCTTGAGAATCCCTGCAGCTATGATTCATTTGATGCTGCTGTTGCTCTTCACGCTTCTCGTCATAAAACAGTAGAGCAGCCAGCCCTTGCATCCCATTCGACCATCTGGGGTGCTGAAGAAACCTGTGATGAGTTCAGTTTTAACTTGGCAGCATCTAGGAAGCAAGAAAGTTCAAACACTTCAGCTAGCAGCTCTCCTGATAGTGACAGTGGTGTTCTTCCTTCAACCTCACAAGGGTTTCAAGGCTTTCTTCAGGACTTAGCTGGAGCAAAGGTTGCTGATAATCCTTGTATGGATGATGGCAAACATATGGAGGCACTTTGTGCCAATTCTCCACCTCGAAGTAAAAGTGATTCTGGGTTAAAGCATCAATCTCTAGCTGACTTATATTGGGCTGATTCACTTGGACCACTGGACTTAGAGTTACCATCCGTGAGATACCAAGCTGAGGACTTACTCTTAGGAGACAGTCAGAATAGTTGGAATCGCATGATGGTGAATAGCCTGGATGCGTTTCGAAATCTGTCATTCTTCATGGCAGATAAGAATGACTCAATCCCATCCATCATGTAG
Protein Sequence:
- >OMERI03G32960.3|Oryza_meridionalis|MYB_related|OMERI03G32960.3
MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKVGSLELGSFTALGPKFPSAAHRLSLHLTSSGGEHALASSPSHSRPPRAGLDPEATPPASIASRFESNRIEGSRKIGGSAELYAPSEVCLCREADRQWAAWTRQEEQSFFNALRLEGKNFEKITLHVQSKNKDQVRHYYYRLVRRMKKLLGPEFSLDAKNSKDIVAAMLCWWSLLEKFSCSASKLHLKPRRFKTFVEALGNQLLKDRNKTRKKCPRGDVCLSSSSPILNRTPGNESSSVKLLPVDVSNGSKVASSKGAVFKRGAEPNSNNKSGSTKGDLSATITVKQKKRAGGGVASAAYRKWERDAMAGVSLVADAAEELERNTVNVDARMLSPSPSNVCTVDGPGTNHMNEADKQAPAKLKLQLFPINEATQKALEKDEHNPHLELTVSARKKISSVLEHLNRKWGSSNIASGELLLFPYCANQEDLATYQRWTTRDTVVVADVFLSVNSPPVFRLRYGWFSLAELEGGSGISSTHFKNCMIPEDIHAKSPSEACVQKDGTFLSSCAPDEHLCNSKDRSALFLAMTFSTGKSAKGQELHSDFPTSWFSRQKQEKVSTNQANLGMDCAIISEGEWADTLTDISVGYLLTEASVGTNTDCPGTAIAKNTLFLENPCSYDSFDAAVALHASRHKTVEQPALASHSTIWGAEETCDEFSFNLAASRKQESSNTSASSSPDSDSGVLPSTSQGFQGFLQDLAGAKVADNPCMDDGKHMEALCANSPPRSKSDSGLKHQSLADLYWADSLGPLDLELPSVRYQAEDLLLGDSQNSWNRMMVNSLDAFRNLSFFMADKNDSIPSIM