Information report for NNU_011020-RA
Gene Details
|
|
Functional Annotation
- Refseq: XP_010262528.1 — PREDICTED: telomere repeat-binding protein 5
- Refseq: XP_010262529.1 — PREDICTED: telomere repeat-binding protein 5
- Refseq: XP_010262530.1 — PREDICTED: telomere repeat-binding protein 5
- Refseq: XP_010262531.1 — PREDICTED: telomere repeat-binding protein 5
- Refseq: XP_010262533.1 — PREDICTED: telomere repeat-binding protein 5
- TrEMBL: A0A1U8A5P8 — A0A1U8A5P8_NELNU; telomere repeat-binding protein 5
- STRING: XP_010262528.1 — (Nelumbo nucifera)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn108091
- Citrus sinensis: orange1.1g042386m
- Manihot esculenta: Manes.02G131200.1.p, Manes.01G172100.2.p
- Populus trichocarpa: Potri.009G032000.1, Potri.009G032000.4, Potri.001G241600.1, Potri.009G032000.3, Potri.009G032000.2
- Prunus mume: XP_008222427.1, XP_008222420.1
- Prunus persica: Prupe.6G074100.2.p, Prupe.6G074100.1.p
- Pyrus bretschneideri: Pbr018915.1
- Ricinus communis: 28880.m000016
- Vitis vinifera: GSVIVT01024936001, GSVIVT01016524001
- Ziziphus jujuba: XP_015874013.1
Sequences
CDS Sequence:
- >NNU_011020-RA|Nelumbo_nucifera|MYB_related|NNU_011020-RA
ATGGTGTTGCAGAAAAGGTTTGATTACGGATTCAATGGCTACCATGTACCTCGAGCTTCCAGATCAGCTAGGGGGAGGGGTTCAGTTAAGAAGAAGGTTGAGGACAATTCAATGTGTGCATTTGAATTACTTGCTACTGTAGCTGGAAAGCTACTACAGGAGAAGGAAACTTCACCTATTCATGCTAAAGCATTGGCTGGGAATGATCGGACTACCATTGTTAAACACATTGTTAAAGAAGAACATCAGGATGAAGTGAAAATATTAAAATCAGAACCTTTTGATCAGGGAAGCTGCAATGAGGGTGTCTTTGCTTCTGGGCTTAGGTCTCAGGATCACAACCAAATACATGTTTCAAAGGAATATTCACATGTTCAGAATGTTGTTGGTTTGGGGCACTCTTCCATAATAAGAAAGTCTGACTGCTTAGAGAAGTTTGGTTGTGGTGAGGATTTTTTAAATGGAAAAAGAAGGAATGAGTTTGGGAGGTTACGAAGTACAGAAGGGGAAGGTTCCCCTGCCAATGAGGAACCTTTTGGAGGCAAGGTAGAAAATGGAACAGATGGAGTGCCTGAGGCACAAAAGATCAGCAGTGGTGTAAATGGAACTGTGCCTGATGCATGCAGTTCAGGGGATCCAATGAAATTGGATAGGAAACCTTGTGTGTTAGTCAGCTCAGACAGTAGTGTAGAAATACCCTTACATAGCAACTGTATCTCTCATGCTTCTTTCCCCAGATGTCAGGATGATATCAAAATTGTAAATAAAGATGATGATGAAAACTCTTCTGGGTGCACTCAACCTAGCACCATAAATGTCAAGGCCTTTAGACCAGCAGGGCGTATTGGAGATCGGAGAATAAGGAAGCTGTTGGCATCCAAATACTGGAAAGTAGCTCCAAAGTTGAAGGACGGTGAACTTTCAAACCATGATGGGGACATGAACTCTTTTTCCTGCAATAGGAAAACCTGCTATACACGCCAAAGATCTCAGAGGAACTCTCCTTTCAAGAAGAGAAAGCTGTTTGATCGAAGCTCAGTATCAACATCAGATGGAGTAATTAGCAGTGAAGGTGTTTTCAATACACCTGAAAAGGGAATCAATGGAGTCACAACTGGCTCAGCAAGTGGGGCTTCATCTGTGGCAGGGCAACAAGTGTCATTTCAACCCAGAGACTCTCATGTGAGGCTTAGTATCAAGTCCTTCCGGATTCCAGAGCTATTCATTGAGATCCCTGAAACTGAAACCATTGGTTCATTGAAGAGGACAGTAATGGAGGCTGTGACTGCAGTACTTGGAGGCGGACTTCGTGTTGGTGTCCTTCTTCAGGGAAAGAAGGTTAGAGATGACAATAAAACTCTTCTTCAGACTGGAATCTCACATGATAACAAGCTTGACTCTTTGGGCTTTACTCTGGAGCCTAACCCCACAAATGCTCCACCTCTTATATGCCCTGAAGATCCTCCTTTTCTTCTACCTTGTGATGCACCCCAACCACTGAACAGGTATCCAACCCCGGCTGCTTTAGACCCAGGGGCTTCTGAGGCCTCCCCTGATCCTCCAATGGCTAGTTTAGCGAACTGTGTTGAAAGTGATCATGATTCTGTTCCTTCTCCTATTGACATGTCAACGGATAAAACAACACCAGATTCTAGAGCTTTAGTTGCTATTCCAGCAATGAGTGTTGAGGCTTTGGCTGTGGTCCCTTATAACCGGAAATCTAGGAGATCTGAACTTGTTCAGCGCCGAATCAGGAGGCCCTTCTCTGTTGCAGAAGTGGAAGCACTTGTTCAAGCAGTTGAGAAACTTGGGACTGGAAGGTGGCGTGATGTTAAATTACGTGCTTTTGATAATGCCAAGCATCGGACTTATGTTGACTTGAAGGATAAATGGAAAACATTGGTGCACACGGCAAGAATCTCTCCTCAGCAAAGAAGAGGAGAGCCCGTTCCCCAGGACCTCTTGGACCGCGTCCTCTCTGCACATGCTTACTGGTCTCAACAGCAGGCCAAGCAACAGGTCAAGCAGCAGCCAGAGACGTGCCTTCTCGTCTAG
Protein Sequence:
- >NNU_011020-RA|Nelumbo_nucifera|MYB_related|NNU_011020-RA
MVLQKRFDYGFNGYHVPRASRSARGRGSVKKKVEDNSMCAFELLATVAGKLLQEKETSPIHAKALAGNDRTTIVKHIVKEEHQDEVKILKSEPFDQGSCNEGVFASGLRSQDHNQIHVSKEYSHVQNVVGLGHSSIIRKSDCLEKFGCGEDFLNGKRRNEFGRLRSTEGEGSPANEEPFGGKVENGTDGVPEAQKISSGVNGTVPDACSSGDPMKLDRKPCVLVSSDSSVEIPLHSNCISHASFPRCQDDIKIVNKDDDENSSGCTQPSTINVKAFRPAGRIGDRRIRKLLASKYWKVAPKLKDGELSNHDGDMNSFSCNRKTCYTRQRSQRNSPFKKRKLFDRSSVSTSDGVISSEGVFNTPEKGINGVTTGSASGASSVAGQQVSFQPRDSHVRLSIKSFRIPELFIEIPETETIGSLKRTVMEAVTAVLGGGLRVGVLLQGKKVRDDNKTLLQTGISHDNKLDSLGFTLEPNPTNAPPLICPEDPPFLLPCDAPQPLNRYPTPAALDPGASEASPDPPMASLANCVESDHDSVPSPIDMSTDKTTPDSRALVAIPAMSVEALAVVPYNRKSRRSELVQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQDLLDRVLSAHAYWSQQQAKQQVKQQPETCLLV