Information report for NNU_008604-RA
Gene Details
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Functional Annotation
- Refseq: XP_010258546.1 — PREDICTED: pentatricopeptide repeat-containing protein At2g22070
- Swissprot: Q9SHZ8 — PP168_ARATH; Pentatricopeptide repeat-containing protein At2g22070
- TrEMBL: A0A1U8A1F3 — A0A1U8A1F3_NELNU; pentatricopeptide repeat-containing protein At2g22070
- STRING: XP_010258546.1 — (Nelumbo nucifera)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT3G12770, AT2G29760, AT3G22690
- Citrullus lanatus: Cla97C09G165370
- Gossypium hirsutum: Gh_A13G0768
- Juglans regia: Jr12_20270
- Malus domestica: MD17G1217600
- Oryza sativa: PPS1, PPR756
- Saccharum spontaneum: Sspon.03G0013710-1A, Sspon.03G0013630-2C
Sequences
CDS Sequence:
- >NNU_008604-RA|Nelumbo_nucifera|MYB_related|NNU_008604-RA
ATGTGTGTTAGTGTTAAGGAGCCTTCTGTTCCACCTTCTTTCTTCTCTCCTTCAGATTTCTACGCAACCCTCCTCCAGACAAGCCTAAAGACGAACATCCCGATTGCTGGAAAATCGATTCATGCTCGAATTATCAAAACTGGGCTTCACCTCGGCGTGTTCTTAACGAACAATCTAATCAATTTCTATGCCAAGGCTGGATCAGTTTCTGATGCCCATAAGTTATTTGATGAAATGCCTCTGAAGAATACGTTTTCTTGGAACACGATACTCTCGGCTTATGCAAAACAGGGGAGGATGGATGTAGCGTGTCGGATTTTTGAGGAAATGCCTGATCACGACTCGGTTTCATGGACTACGATGATCGTGGGTCAGAACCAACTACGTTGCTTTCATAATGCCATTTGGATGTTCCTAGAGATGATTTGGTCTAGAGTTCCACCCACCAAATTCACATTTACAAATATCCTTGCCTCCTGTGTGGCCCTGGGAGATTTGGATTTAGGCAGGAAGGTTCATAGCTTTGTTGTTAAACTTGGGCTAAGTAGTTACGTTCCTGTTGCAAATTCCCTTCTCAATATGTATGGAAAGTCTGGGGATCCGGTGACAGCAAAAGTTGTTTTCGATAGGATGAGATTGAGAAGCATATCAAGCTGGAACACAATGATTTCATTGCACACACAATATGACCGATTTGATCTCGCTCTTGCCCAATTTGAGCAGATGACAGAGCGAGATGTTGTTTCTTGGAACGCTATGATTGCAGGTTACAATCAGCATGGACATGATCTAGAGGCAGTACATTTCTTCTCAAGACTGCTGAAAGAATCTTCTACAATGCCGGATAAGTTCACCTTAGCTAGCACTCTGTCGGCATGCGCCAATCTTGAGATGTTGAAACCTGGGATGCAAATACACGCTTACACCTTCAGAACAGGACTGAATATTTATGGACCAGTTCAGAACGCTTTGATCTCTATGTACTCCAAATCTGGTGGGGTCAAAATTGCCAGAAAAATAGTCGAGAAAAGCATGACCACCAATCTCAATGTGATCTCATTTACATCTCTACTTGATGGCTACATCAAACTTGGGGACATAAACCCTGCAAGACAGATCTTCGACTCATTAAGAGACCGCGATGTGGTTGCATGGACTGCCATGATTGCAGGCTACGTGCAGAATGGCTTTAATAAGGATGCAATAGATCTCTTCAGATTAATGGTGGATGAAGGACCCAAGCCAAACAACTACACCCTAGCAGCCATGTTGAGTGTTTGTTCAAGCTTGGCTTCACTGGAACATGGGAAGCAGATCCATGCCAATGCCATAAGGTCAGGAGAAGACTCGTCAGTTTCTGTAGGCAATGCCCTCATCACCATGTATGCCAAGGCTGGAAACATTGAAGGGGCAAGACGTGTGTTCAATCAGATTCACTTGAACAGGGATACTGTATCTTGGACTTCCATGATCATAGGTTTAGCTCAACATGGTCTTGGAGAAGAAGCAATAAAACTGTTTGAAATGATGCTGGTTTTCGAAATCAAGCCTGACCATATAACATATGTTGGTGTGATCTCTGCCTGTACACATGCAGGTTTGGTAGAACAAGGCAAGAACTATTTTACTTTGATGCAAAGCATACACAGGATTAATCCCACCCCAAGCCACTATGCATGCATGATTGATCTGTTTGGACGAGCTGGGTTGCTTGAAGAAGCTCAACATTTCATTGAGAAGATGCCAATCAAACCAGATTCTATAGCCTGGGGTTCACTTTTAGCTTCTTGTAAGGTCCACAAAAATGTAGAGCTGGCAAAAATTTCTGCAGAGAATTTACTAAGTATAGACCCAAATAACAGTGGGGCCTACTCGGCACTAGCTAATGTCTATTCTGCATGTGGAAGATGGGATGATGCTGCTAAGATCCGGAAAAGAGAAGAAGCTGCAGCAACAGGAGATATGTTGGTTAGGAGAGATGAAGGAGAGGCAACATTGGCAACCAAAGAAGACAGACTCCTCCGCGCCTTCGTTAAACAATATGGCCCAAAGGAATGGCACCTCATCTCTCAATGCATGGGCAAACCCTTGCACCGAGATGCCAAATCCTATCTCGAGCAGTGGAAGAACCATCTCAAACCTGGGTTGTTGTTGAGGGCTGCATTTCAGTGA
Protein Sequence:
- >NNU_008604-RA|Nelumbo_nucifera|MYB_related|NNU_008604-RA
MCVSVKEPSVPPSFFSPSDFYATLLQTSLKTNIPIAGKSIHARIIKTGLHLGVFLTNNLINFYAKAGSVSDAHKLFDEMPLKNTFSWNTILSAYAKQGRMDVACRIFEEMPDHDSVSWTTMIVGQNQLRCFHNAIWMFLEMIWSRVPPTKFTFTNILASCVALGDLDLGRKVHSFVVKLGLSSYVPVANSLLNMYGKSGDPVTAKVVFDRMRLRSISSWNTMISLHTQYDRFDLALAQFEQMTERDVVSWNAMIAGYNQHGHDLEAVHFFSRLLKESSTMPDKFTLASTLSACANLEMLKPGMQIHAYTFRTGLNIYGPVQNALISMYSKSGGVKIARKIVEKSMTTNLNVISFTSLLDGYIKLGDINPARQIFDSLRDRDVVAWTAMIAGYVQNGFNKDAIDLFRLMVDEGPKPNNYTLAAMLSVCSSLASLEHGKQIHANAIRSGEDSSVSVGNALITMYAKAGNIEGARRVFNQIHLNRDTVSWTSMIIGLAQHGLGEEAIKLFEMMLVFEIKPDHITYVGVISACTHAGLVEQGKNYFTLMQSIHRINPTPSHYACMIDLFGRAGLLEEAQHFIEKMPIKPDSIAWGSLLASCKVHKNVELAKISAENLLSIDPNNSGAYSALANVYSACGRWDDAAKIRKREEAAATGDMLVRRDEGEATLATKEDRLLRAFVKQYGPKEWHLISQCMGKPLHRDAKSYLEQWKNHLKPGLLLRAAFQ