Information report for NNU_001734-RA
Gene Details
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Functional Annotation
- Refseq: XP_010241815.1 — PREDICTED: protein ALWAYS EARLY 3-like isoform X1
- TrEMBL: A0A1U7Z4V1 — A0A1U7Z4V1_NELNU; protein ALWAYS EARLY 3-like isoform X1
- STRING: XP_010241815.1 — (Nelumbo nucifera)
- GO:0005730 — Cellular Component — nucleolus
- GO:0016592 — Cellular Component — mediator complex
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Gossypium arboreum: Cotton_A_04877_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A02G0465, Gh_D02G0520
- Musa acuminata: GSMUA_Achr6P11910_001, GSMUA_Achr10P17210_001
- Prunus mume: XP_008246392.1, XP_008246393.1
- Prunus persica: Prupe.6G323800.6.p, Prupe.6G323800.3.p, Prupe.6G323800.1.p, Prupe.6G323800.5.p
- Ziziphus jujuba: XP_015875085.1, XP_015875086.1, XP_015875083.1, XP_015875084.1
Sequences
CDS Sequence:
- >NNU_001734-RA|Nelumbo_nucifera|MYB_related|NNU_001734-RA
ATGATAGTTTACATGGCCCCACCAAGAAAATCCAGAAGTGTGAATAAGCGGTTTCCAAACGTTAATGAGGAGTCTCCTGACAAGGATAGAGGCAATGCAAACAAAAGTAGGCAACGGAAGAGGACATTATCTGACATGTTAGGGCCTCAATGGAGTAGGGAAGAACTCATCCGTTTCTATGAGGCTTACCGCAAGTATGGGAAAGACTGGAAGAAGGTGGCTGGTATAGTACGTAATAGATCTGTTGAAATGGTAGAGGCTCTTTACAATATGAATAGGGCATACTTATCCCTTCCAGAGGGGACAGCATCTGTAGTTGGATTGATAGCAATGATGACTGATCACTACAATGTTTTGGAAGGAAATGATAGTGAACGTGAAAGCAATGATGTGTCAGAAACATCTCGAAAGCCTCAAAAGCGTGGTCGGGGAAAAGTTCGAGATAATGTTTCAAAGGGATCAGATAGATATCTTTCAGATTTGTTGCATTCCCAGTCTGCATCAAGTTATGGGTGCTTATCATTATTGAAGAAGAGGCGCTCTGGTGGTAGTCGACCTTGGGCTGTTGGTAAGAGGACACCTCGCTTCCCTGTTTCACATTCATATGATAAAGATGACAGGGAAAAGCATGTCTCATCAAATAAACGAGGCATGAAACCAGAGATTGATGCTAATGACGATGAAGTTGCCCATGAGGTAGCATTAGCATTGGCAGAGGCTTCACAAAGAGGAGGTTCTCCTCAAGTTTCTCAAACACCAAATAGAAGAGAGTCCATGAGGCCTTCGCCTGTTCAGAATGGTGAAAGGATGCATGCCGAGTCAGAGATGGCTAGTGCAAGACTTACTGGTACTGGAATGGATGAAGATGGTTTGGAAGATAGTTTAGGAAGCAAGGAAGCAGAGAATGGAGATTTTTCTAGGGATACAGGTAATCAGATAGATGCAGAAGGTGCTGGTACAATTGAAGTTCAATGGCAACAGAAGAAATTTCATGGAAGGAAGCTGAAAGTTGAAGAAGTTGAGACCAATCATTTTGATGATATTAGGGAAGCATGTAGTGGTACTGAAGAAGGAATTAGTTTGGGTACTGTCAAAGGGAGGGCTGAAACTGAAGTTACAGATGCTAAGATCCAGAGGTCCTCTCCTCAGCGTCCAAGAAAAAGAAGCAGACAACTTTTCTTTGGAGATGAAAGCTCAGCCTTGGATGCTCTGCAAACTTTGGCAGATTTGTCTTTGATGATGCCATCATCTACAATTGAAAATGAACCACATGTGAAATTCAAGAAAGAAAAGAGAGCATTGGATGTTGAGAAATCTAGTGCACCTGAAGCTATGCCCCTGAAGGAGCAAAGAGACAAATCCAAAATGTCAGCAACTAAAGAGAAAGGACATCAGTCAGTAGCTGCTGTTGGAGTCGTTGGTGCAAAAAGTGCTAAACTGGGAAGAGATTCAGCTGTTGATGATAGTGTTGTTACAGAAACAAAGCAGCGTCCTTTCCAGTCTAGTCCTAAAATGAGAAATAGAAAAAGAAAGTCCTTGGCAACAAAAAGTCCAAAATCAGAAGGTCACAGTGATTCATATCCCAGTGAGCTTCAGAAGACTGAGGCCTTAATGGAAGAAGGAAAGAAATCTGTGACAAAAGGTAAACGGACTAATCAAAGTACTCTTCTGCCAAAGCATGGGAAATTAGTCAAACCTTCAGAACGTTCTTCTTCAAGCACTGATCAGCCAAGAGCAGAAACTGAGTCAGCTGTATCAATGATACAAGTTCAACCTGCAGACCAAGTAAACTTACCAACCAAACTTAGGAGTAGGCGTAAGATAAATCTACCAAAATCATTTATCTCAAAGGAGCTGAAATCTTCTGATAGTTCTGGAAAAGATCGACCTAATATGTATTCATTGTCACTTCATGACAAGACACTTGATTTTAAGGAAATGCTTTCTCATTGTCTGTCATCACCGATGCTACGTAGGTGGTGTGTTTTTGAGTGGTTTTATAGTGCAATTGATTACCCATGGTTTGCTAAACGGGAGTTTGTAGAATACTTGAATCATGTTGGGTTGGGTCATATTCCAAGGTTAACTCGTGTTGAATGGGGTGTCATAAGGAGTTCCCTTGGCAAGCCCCGAAGGTTATCTGAACAATTTCTAAAGGAAGAGAAGGAGAAACTAGAACAATATCGTGAATCCGTTAGAACACATTATGCAGAACTTCGTGCCGGTACTAGAGAAGGTCTTCCTACAGACCTGGCACGACCTTTATCAGTTGGGCAGCGTGTTATTGCTTGTCACCCCAAGACACGTGAAATCCATGATGGCAGTGTACTAACTGTTGATCGTAACAGATGCAGAGTTCAGTTTGACCGGCCTGAACTAGGGGTTGAATTTGTCATGGATATTGACTGCATGCCTTCGAATCCAATGGAAATTATGCCTGAATTTCTTCGAAAACAGACTGCTGAAGTTGAAATTTTCAGTGAGAATATCAATGAGCCTAAAATGATTCGATCCAAAGATCTGAAAAATGGATGTTGCATGAAATTTGCTCCATGTGAGAATATGGAAATCGTAGATTGTTCTTCTCAGATTTCATCTGCGACTTATCCCATGAACACTCTGTTAAAGCAGGCAAAGGAGGACACAATCAATTCCATTTCGCAGGCTAAAGCTGCTGCCAGTGAAATGATTAATGCACAACATGCTAGATACACTCAGCCATTTACTCTAGCACAAGTTCAAGCAAAGGAGGCTGATATACGGGCTCTTTCTGAGCTGACTCGTGCTCTTGATAAAAAGGAAGCTCTGTTACTAGAGCTGAGGCACATGAATGATGAAGTGTTGGAAAACCAGAAAGGTGGAGACAATTCTCTTAAAGATTCTGACCCTTTCAAGAAGCAATATGCCACGGTTTCTTCTGCTCTTCTTTATTTGAGGCAACGAAATACTTACCATGGAAATTCTCCACTGCCATGGATGAAGCCCCAACCCAGTTCAGGTGGTCCTATTGGACCAAGCTCCTTTGATCACACTGAATTTTTCCCTCAAGAATCTGGATCTCATGTTGCTGAAATTGTTGAAAATTCCAGATTGAAAGCACAGGCAATGGTACATACAGCTATACAGGTTATGTTCTCTTTGAAGGAAGGCAAAAATGCTTTTGCAAGGATTGGAGAAGCTTTAGATTCGGCTAATAATCGGCATTTTAAAGCTGATTCTGTTGCATCAGCTATTAGAGATCCAGCCAATGGAGGTTTGACTTATCAGGATCATCCAACGTCCTGTATATCAGAGCCAACAACTACAGTTCCTGCATCTGATCTGAAGTTGAACATTTCTGACTCAAATGAATCTCAGATCCCTTCAGAGCTTATCTCATCTTGTGTTGCCACATTACTCATGATTCAGACATGCACTGAGCGGCAGTATCCCCCTGCTGAAGTTGCCCAGATAATAGATTCTGCAGTTAAGAGCTTGCAGCCATGTTGTTCTCAGAACCTTCCAATTTATGGAGAGATACGTAAGTGCATGGGAATCGTAAGGAACCAGATATTGGCACTTGTACCAACATAG
Protein Sequence:
- >NNU_001734-RA|Nelumbo_nucifera|MYB_related|NNU_001734-RA
MIVYMAPPRKSRSVNKRFPNVNEESPDKDRGNANKSRQRKRTLSDMLGPQWSREELIRFYEAYRKYGKDWKKVAGIVRNRSVEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEGNDSERESNDVSETSRKPQKRGRGKVRDNVSKGSDRYLSDLLHSQSASSYGCLSLLKKRRSGGSRPWAVGKRTPRFPVSHSYDKDDREKHVSSNKRGMKPEIDANDDEVAHEVALALAEASQRGGSPQVSQTPNRRESMRPSPVQNGERMHAESEMASARLTGTGMDEDGLEDSLGSKEAENGDFSRDTGNQIDAEGAGTIEVQWQQKKFHGRKLKVEEVETNHFDDIREACSGTEEGISLGTVKGRAETEVTDAKIQRSSPQRPRKRSRQLFFGDESSALDALQTLADLSLMMPSSTIENEPHVKFKKEKRALDVEKSSAPEAMPLKEQRDKSKMSATKEKGHQSVAAVGVVGAKSAKLGRDSAVDDSVVTETKQRPFQSSPKMRNRKRKSLATKSPKSEGHSDSYPSELQKTEALMEEGKKSVTKGKRTNQSTLLPKHGKLVKPSERSSSSTDQPRAETESAVSMIQVQPADQVNLPTKLRSRRKINLPKSFISKELKSSDSSGKDRPNMYSLSLHDKTLDFKEMLSHCLSSPMLRRWCVFEWFYSAIDYPWFAKREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSEQFLKEEKEKLEQYRESVRTHYAELRAGTREGLPTDLARPLSVGQRVIACHPKTREIHDGSVLTVDRNRCRVQFDRPELGVEFVMDIDCMPSNPMEIMPEFLRKQTAEVEIFSENINEPKMIRSKDLKNGCCMKFAPCENMEIVDCSSQISSATYPMNTLLKQAKEDTINSISQAKAAASEMINAQHARYTQPFTLAQVQAKEADIRALSELTRALDKKEALLLELRHMNDEVLENQKGGDNSLKDSDPFKKQYATVSSALLYLRQRNTYHGNSPLPWMKPQPSSGGPIGPSSFDHTEFFPQESGSHVAEIVENSRLKAQAMVHTAIQVMFSLKEGKNAFARIGEALDSANNRHFKADSVASAIRDPANGGLTYQDHPTSCISEPTTTVPASDLKLNISDSNESQIPSELISSCVATLLMIQTCTERQYPPAEVAQIIDSAVKSLQPCCSQNLPIYGEIRKCMGIVRNQILALVPT