Information report for mrna28104.1-v1.0-hybrid
Gene Details
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Functional Annotation
- Refseq: XP_004294731.1 — PREDICTED: uncharacterized protein LOC101296074
- TrEMBL: A0A2P6Q238 — A0A2P6Q238_ROSCH; Putative transcription factor MYB-HB-like family
- STRING: XP_004294731.1 — (Fragaria vesca)
- GO:0006869 — Biological Process — lipid transport
- GO:0003677 — Molecular Function — DNA binding
- GO:0008289 — Molecular Function — lipid binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Beta vulgaris: Bv4_074840_wwrw.t1
- Cicer arietinum: XP_004500362.1
- Citrullus lanatus: Cla013417
- Citrus sinensis: orange1.1g016046m, orange1.1g016203m
- Cucumis melo: MELO3C026878P1
- Cucumis sativus: Cucsa.118910.1
- Malus domestica: MDP0000262878, MDP0000144544
- Prunus mume: XP_008241815.1
- Prunus persica: Prupe.6G041700.1.p
- Pyrus bretschneideri: Pbr017281.1, Pbr013131.1
- Ricinus communis: 29889.m003386
- Vitis vinifera: GSVIVT01024564001
- Ziziphus jujuba: XP_015874519.1, XP_015874696.1
Sequences
CDS Sequence:
- >mrna28104.1-v1.0-hybrid|Fragaria_vesca|MYB_related|mrna28104.1-v1.0-hybrid
ATGGACTTAGACGTCGACGTTTCGCGGTGGGTCCTCGAGCTCCTCCTCCGCGACCGCGACAAGGAGAGCGTCGCCAAGCGCGTCCTCGCCGTCGCGCCGCTCTCCGACCACGACTGGCGGTTGAAGAAGACCCTCCTCCTTCGCTCAATCGAGTCCCAGATCTTCGACGAGGCTTCCGTCAGCGAATCCATCCTCGAGTCGTTGGAGTCGATCGAGGTCTTGGACCGCGGCCAAGGGATTCCGGTCACGGACGCCATGAGGGCGGCGTACTGCGCCGTCGCGACGGAGTTGACGGTGAGGTTTTTGGTTTGCTTCAGAGGGAAGCCCGGCGGGAAGTACATGGAGGCGGTTGATAGGATTTGGAGGGGTAGGGTTAGGGTTTTGGAGGAGACTGAGGGTTGCGAGCTGGTTTCGGCGGAGTTGAAGGAGAGGAGGGATGAGGTGGAGGCTGGGATTTGGGATATGAAGGTTTCGAAGAAGCTAGCCAGTTTGAATAGTAGAAATGATGCGCTGAGATTGGTTGCGGCGTATGTGAAGGAAGCTATGGCGATGCTGGGTCCTCCGTTTATTGCTTGGGCGGTTAGGTTTAATACGGAGAAGGGGAGTATAAGCTCGGAAGGTGAGCAGGTTGCGGTGGAGAATGATGGTAATGTGGGTGATGGGCGGGTCCGAGTGGCGAATGGGGTCGATTTGGAGGTGCAAACGATGAATGGTGCTGATTTGGATGCCCAGATGGCGAATGGGGATAATGTGCCTTATGGGTCTGAATTGAAAGCGCAGAGAGGGGATAATGTCAATTCTGTGTCTGAACAGGAGGCACAAAAGGCAAATGTAGCAAATGATGTTAGTAATGCTTCTGAACGGGAGGCTCATGATACTACTGTGAGTGATGAGTCTGAATCGCAAGTTGTGACTCTAGCTTGTGTCAATTCCACGTCTGAAATGGATCACCATACTACGAATGGTGTTCAACTGCAGGTAGCGGGGGCAGGGAGATTGCCATCTAATGGAAACCGTCATGTCCTCAGCTTTGAACCCGAAACTAAAGAGAAAGAAACTCCAAGGACCATGGCACCTAGACGCAGGCATGGACCAGCTAAGATTAGAGATGATGAAGATGTGGATAAAGAAGCACCAGCTGGCATATATAACTCAGTGTCTAGTGCTGAAGTTAAAAAAGTGCAAGAAGAACTTAAGTCCAGTGTTTTGGCTCTACAAGCTGCAGTGACAGACCCACTTCCTTATGCTTTGCACATATCAGAAATGCTAAGATCTGAGTTGGGAATGAGACCTGTGGATCATGTAAGTAAAGAAAACGGATGTGCAACAAATCCATCTGTTGAAAAGAACGCTGAGCCTGATCAATCTAATAATGATAATCATGGAAACCAGACCAGTCATAATAATGATGTTCCCCAACCTACGCCAAATCTGTCTGTTGACATGGGAAAGGGCACGGAGAATGCTGGAACAGGGGATGTCAATCCTGAAAATCCGTCTTGCAGTCACCAGAATAATGTTTCTCGAGCAAGCTTGATGGAACGTAATAGTACTGCCCGTACTTATGAGAAGTATGACGACAAAAAAATTTCTAAGAGGCGAAAAGTTAAGAGATGGAGCTTACAGGAAGAAGATACATTAAGGACCGGTGTGCAGGAGTATGGCATAGGCCATTGGAAACTTATCTTGGATGCATACCGAGATGCATTTGAAGAGAGAACTGAGGTTGATCTAAAGGACAAGTGGAGAAATATGACGAGAAGATTACTCACTACAGAAGTAGCAGGTATGGCCAGATTTCAAGTTGGTGTTGCGTTCATGGTTTTACTAATATCCATGGCGATGACCACTCCTTATGTCACTAAAGCAACCATAACTTGCGGTGAGGTGACGACCTTACTCACTCCCTGCATTCCATTTGGAGTGTTGGGAGGGATCGTGCTGCCGGATTGTTGTGCCGGGATCAAGGGGCTCAATGCTGCACAAAATACGACAGAGGATCGAAGAACGGCTTGTACTTGCATTCAAGAAGGAGCAGCTAGGATTCCTGGGATTGATTATGATCGTATAAACATGCTGGGCGATCTTTGTGGTTCTCCTTGTCCCTACAAAGTTTATCCATCTACTGATTGCTCTCAGGTAAGCTGA
Protein Sequence:
- >mrna28104.1-v1.0-hybrid|Fragaria_vesca|MYB_related|mrna28104.1-v1.0-hybrid
MDLDVDVSRWVLELLLRDRDKESVAKRVLAVAPLSDHDWRLKKTLLLRSIESQIFDEASVSESILESLESIEVLDRGQGIPVTDAMRAAYCAVATELTVRFLVCFRGKPGGKYMEAVDRIWRGRVRVLEETEGCELVSAELKERRDEVEAGIWDMKVSKKLASLNSRNDALRLVAAYVKEAMAMLGPPFIAWAVRFNTEKGSISSEGEQVAVENDGNVGDGRVRVANGVDLEVQTMNGADLDAQMANGDNVPYGSELKAQRGDNVNSVSEQEAQKANVANDVSNASEREAHDTTVSDESESQVVTLACVNSTSEMDHHTTNGVQLQVAGAGRLPSNGNRHVLSFEPETKEKETPRTMAPRRRHGPAKIRDDEDVDKEAPAGIYNSVSSAEVKKVQEELKSSVLALQAAVTDPLPYALHISEMLRSELGMRPVDHVSKENGCATNPSVEKNAEPDQSNNDNHGNQTSHNNDVPQPTPNLSVDMGKGTENAGTGDVNPENPSCSHQNNVSRASLMERNSTARTYEKYDDKKISKRRKVKRWSLQEEDTLRTGVQEYGIGHWKLILDAYRDAFEERTEVDLKDKWRNMTRRLLTTEVAGMARFQVGVAFMVLLISMAMTTPYVTKATITCGEVTTLLTPCIPFGVLGGIVLPDCCAGIKGLNAAQNTTEDRRTACTCIQEGAARIPGIDYDRINMLGDLCGSPCPYKVYPSTDCSQVS*