Information report for mrna22621.1-v1.0-hybrid
Gene Details
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Functional Annotation
- Refseq: XP_004304372.1 — PREDICTED: uncharacterized protein LOC101292525
- TrEMBL: A0A2P6RDJ2 — A0A2P6RDJ2_ROSCH; Putative transcription factor MYB-HB-like family
- STRING: XP_004304372.1 — (Fragaria vesca)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn286431, Achn190451
- Gossypium arboreum: Cotton_A_07767_BGI-A2_v1.0, Cotton_A_07768_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A09G1194, Gh_D09G1201, Gh_D09G1200, Gh_A09G1193
- Malus domestica: MDP0000310918, MDP0000593593, MDP0000254345, MDP0000278207
- Prunus mume: XP_008240943.1
- Prunus persica: Prupe.7G075800.1.p
- Pyrus bretschneideri: Pbr035838.1, Pbr003389.1, Pbr019240.1
Sequences
CDS Sequence:
- >mrna22621.1-v1.0-hybrid|Fragaria_vesca|MYB_related|mrna22621.1-v1.0-hybrid
ATGGATAAGCCCAGTTTTCCGGAAAAACAAACCACATGGACGACGTGGGAGGAGCTCCTCCTCGCCTGCGCCGTCCACCGCTACGGCACTCAGAGCTGGGACTCCGTCGCCGCCCAGCTCCGCAAGCGCTCTTCCAATCTCCTCCACCTCTCCCCCCAGACCTGTAAACGCAAGTTCCACGACCTCCGTCTCCGCTTCAGCCACCACAACGACGCCGCTCGCGACGGCGACGACGACGAAGACGCGGCCTCCCCTATTCCGTGGCTCGGTCAGTTACGTCAACTCCGCCTCGATGAGCTCCGCCGCGAGGTCCATCGCTACGACGTCTCCATCGTGTCTCTGCAACTGAAGGTGGATAGGTTAAAAGAAGTGCGCGAAAAATCGGATCTGGTGAGGAGCGGAGAGGACCAACAGATCAGAGACCAACCCGTCGTGCCGGAAAACATCTCGCCGGAAAATGTGGCCGGGAAAAAAAATTCCGGCGAAGGCCGGTCATTCGACGAGTCCAACACCATAGATCCGGAACGTGAGATCCCCGGAACCGGAGTCGAGTTGGCGGTAAAGGCCGCCGAACCGGTCGAACCGGCCGCCGGGGATGTCGGAGCGGTGGAGAAGTCGAGTAACCCGGTAGTGGTGGAGGATTCGTGTAATGGGAGTTCCGATTCGGTGGTGAAGGAAGCGCCGGCTGCGGAGTCGGAGAAGGCGAACTCCGGCGAAGTGAGGGACTCGGTGGCGGAGTCTAAGGAGACGAAGGAGTGTCGGAGCAGTAGTGAGGTGCAGAGCACGGCGAGTTTGTCGAGGAAATTAGGGCCGGAAGTGAAGCCGAGCGAACCGGTTGAACCGGACCAGGAGGATCAATCTCCCGCCATGAATCAGGTCCTTGTCGAATCTCAGCCGTTGGTTGAGTTCCTCGGGATGCTCCGATCTCAAAAGGCCGCTTCTTTTTTCGAGCGCCGGCTCCAGTCCCAGGACACACCCATTTATACGAACATGATTCGGCAGCATATAGATTTTGAATCGGTACAAACCAGACTTAATGCGGGTTGGTACTCAAGCTGCAAGATTAAATTTTTTAGAGATGTCTTGCTTATTTGCAAGAATGCTGTTGTCTTCTTCGGGAAAAGGACTGCAGAATACAAGGCGGCGTGTGAGCTTCAATTACTTGTTCTAAAGGAAATGGCTCATAAGGATCCTAATCAAGATCCATCACCTAAACAAGAAACTCAGACACCATCTAAAGATGAAATCCTGACACCACCAGCTATACCATTAAAGCCTGCAAGTGAATCATCAGAGTCCTTGCTAGCAAAATCAAAACTATCAATTCCATTGACTGCTTGTCGTAAGCGCAGCTCAATAAAGGCCAGAGCATCCACCTCTTCTTTGGCACCAGACATAAAGAAAGAGCAAATGACTACATCGTTGCATGATGTCAAACCAGCTATAAGTTGGAAGCAAAAAGAAGAATCCTTGGATGAAGTTGAGGAGCAACTTCCTGTCACAAAGAAGAGAAGAAAAGATAGAGTTGGGAGCAATTCAAGAAACAACTCGAACAAAAATGGCAAGAGCCGAAGTGATGCTAACAAGGAGAAGAATCTAGATGCCAATGCAAATGCAAATGTTGGATCTTCAAGCAGAGCAATGATTAGCAATGAGAATTCAGAGTCCCTGGCCGAGACAGAAAAGAAGAACAATACTGCAATTGGGAAAAGGCAAAGTGCAGAAAAATTCTTGAGTAGAATGAAGAGGAGCTCCACATCTAACAACAAGTCAGAGACGTTGAAAATTCTTGAGAATGATAGCATAGGTGTAGCAGAGCAGAGAAAGAATGGAAACAGCAAAGGGAATGTACAGAAGGCAGCACAGCAGAGAAAAAATGGAAACAGCAAAGGAAATGCACGGAAAGAAGTAGTAGAGCAAAAGAAAAGTGGAAACGGAAAAGGAAGTGCGGAGAAACAACAAGCTTCACGTAGAGGTTCTGGTGGGAGACAGGCAGCGAAAGAGCAAGAGAGCCCCTCGAAAAGGAGCGTAGGAAGGCCCTCAAAGAGAACAGCGGAAACAACAAGAGCTCCTCCAGCTAAACGGCGTAGAAACTAG
Protein Sequence:
- >mrna22621.1-v1.0-hybrid|Fragaria_vesca|MYB_related|mrna22621.1-v1.0-hybrid
MDKPSFPEKQTTWTTWEELLLACAVHRYGTQSWDSVAAQLRKRSSNLLHLSPQTCKRKFHDLRLRFSHHNDAARDGDDDEDAASPIPWLGQLRQLRLDELRREVHRYDVSIVSLQLKVDRLKEVREKSDLVRSGEDQQIRDQPVVPENISPENVAGKKNSGEGRSFDESNTIDPEREIPGTGVELAVKAAEPVEPAAGDVGAVEKSSNPVVVEDSCNGSSDSVVKEAPAAESEKANSGEVRDSVAESKETKECRSSSEVQSTASLSRKLGPEVKPSEPVEPDQEDQSPAMNQVLVESQPLVEFLGMLRSQKAASFFERRLQSQDTPIYTNMIRQHIDFESVQTRLNAGWYSSCKIKFFRDVLLICKNAVVFFGKRTAEYKAACELQLLVLKEMAHKDPNQDPSPKQETQTPSKDEILTPPAIPLKPASESSESLLAKSKLSIPLTACRKRSSIKARASTSSLAPDIKKEQMTTSLHDVKPAISWKQKEESLDEVEEQLPVTKKRRKDRVGSNSRNNSNKNGKSRSDANKEKNLDANANANVGSSSRAMISNENSESLAETEKKNNTAIGKRQSAEKFLSRMKRSSTSNNKSETLKILENDSIGVAEQRKNGNSKGNVQKAAQQRKNGNSKGNARKEVVEQKKSGNGKGSAEKQQASRRGSGGRQAAKEQESPSKRSVGRPSKRTAETTRAPPAKRRRN*