Information report for mrna22515.1-v1.0-hybrid
Gene Details
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Functional Annotation
- Refseq: XP_004302418.1 — PREDICTED: protein ALWAYS EARLY 2 isoform X1
- Swissprot: Q6A333 — ALY2_ARATH; Protein ALWAYS EARLY 2
- TrEMBL: A0A2P6R700 — A0A2P6R700_ROSCH; Putative transcription factor MYB-HB-like family
- STRING: XP_004302418.1 — (Fragaria vesca)
- GO:0005654 — Cellular Component — nucleoplasm
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Glycine max: Glyma.10G153800.9.p, Glyma.10G153800.8.p, Glyma.10G153800.7.p
- Malus domestica: MDP0000293437
- Medicago truncatula: Medtr1g083040.3, Medtr1g083040.6, Medtr1g083040.1
- Prunus mume: XP_008246389.1, XP_008246394.1, XP_008246392.1, XP_008246391.1, XP_008246395.1, XP_008246393.1
- Prunus persica: Prupe.6G323800.4.p, Prupe.6G323800.1.p, Prupe.6G323800.6.p, Prupe.6G323800.2.p, Prupe.6G323800.5.p, Prupe.6G323800.3.p
- Pyrus bretschneideri: Pbr020438.1, Pbr020410.1
- Ziziphus jujuba: XP_015875085.1, XP_015875086.1, XP_015875083.1, XP_015875084.1
Sequences
CDS Sequence:
- >mrna22515.1-v1.0-hybrid|Fragaria_vesca|MYB_related|mrna22515.1-v1.0-hybrid
ATGGCGCCCACCAGAAAAGCTAAAACCGTGAAACGGTATTCAAATTTGAGTGAGGCCTCTCCTGGAGGCAAAAATAAGCAAGGGAAGAGAAAGTTTACTGATCAGTTAGGACCGCAGTGGAGCAAGGGAGAGCTTCAGCGGTTCTATGAAGCCTACCGGAAATATGGGCAGAATTGGAAGAAGGTGGCTGCTGTAGTGCGCAACAGAAATATTGAGATGGTGGAGGCTCTTTACAATATGAACCGAGCGTACTTGTCATTGCCAGAGGGCACAGCTTCTGTTGTTGGCCTTATAGCAATGATGACAGATCACTATAATGTTATGGAAGGCAGTGAAAGTGAACGGGAAAGCAATGATGCTATAAGATATTCTCGGAAACCCCAGAAACGTAAACTTGGTAAAGATAGTGTGTCGAAAGACATGTTCCAGCCTCATTCTACTGCTTCAGTAGATGGATGCCTATCACACTTAAAACGAAGAAGACTTGATGGTAACCAGCCTCGTGCAGTTGGGAAGAGAACACCACGCTTCCCAGTTCAATATTCATCTAAGAAAGATGATGGAGAAAATTATGCTTCTCCAATTAGAAAGGGCCGGAAATCAGAGGCAGATAATGAGTATGATGTCGCCAAGGTTGCAGCATTATTAACTGAGGCTTCTCACAGAGGAGGCTCTCCCCGACTTTCGCAAACACCATATAGAAGATTTACTGTTCAGAGCTCGCAAAGAATGCAGCCACCATCATGGAAAGCTCGAGCCGACCTTCGTGATGCTTCAATGGAAGAAGACTGTCTGGAAGGTAGCGTAGGAAGTAGAGGGGCTGAAACTGGAGATTATACCAGAGATAGTAGCTCCTTGATGGACATGGAAGGTGTAGGTACAGTAGAAATTAGGAGGGGAAAGAAAGTTTATGGAAAGAAAGAGAAAGTTAAAGACATTGGAAACCATCAATTTGATGATGGTGGTGAAGCATGTAGTGGCACTGAAGAAGGACTTCATGTCAGTACCAAGGGAAAAACTGATATTGAAGTTTCAGATGCTAAAGGAGATCAGTTTTACTCACAAGTTCCAAGGCAGGAATGCGGGAAACCATATTTTGGAGATGATAGTGCAGAACTGGATGCTCTGGAAGCTTTGCACACTTTGGCTGATTTGTCATTGATGATGCCAGCGTCCACAATGGAATCTGGGTCCTCAATGCAGTTGAAGGACGAAAGAACAGCTTCCGAGATGGAAGAAAAATCTAATATGCCTGAATCCACATCTACCAGCCAATTTAGAAACAAGAATAAGCTCCCAGGGGGGAAACAGAGAGAACCCATTGCAGATTCTCGAACTGAGGGTACTAATGCCAAAAAATCCAAACTTGCAAGGGACTCGACACCCATTGATATCAATGTTGTCTCCGAATCAGAACAGCTCCACTCTACCAGCAAATCATGGAGAAGGAAGCGGAAACCCACAGTATCAAAGATATCAAATGCCGAAGCAAATATTGATTCTACTGTGAATGAACCTTCATATTCTGAGGTCTTTGGTCAAGAAGAGAATAAATCAGTGGTTAAAGGGAGACGTACTGGTCAAATCTCCACTCCTTCAAAACAATGGAAGTCGGTCAGACCAGGGGACGGCTCTTTGAATAGTGATTTTGGGCAAACAGTGAGTAATGTAATGGTAGCAACTGCAGAAGGTCGACCCACTGCAAAGCAAGTTCATTCCCCAACTAAACAAAGTAGACGTAAACGGTATCTACCCAGAGCAACGGTGCCCAAGTCATCTGAGAACATATTAAAAACTCAACTTCATAAACACTCCAACTCACTGCAGGACAGAATTCTCTATCTAAAGGAGAAGATGTCTTGTTGCTTGTCATCACATCTGGTACGTAGATGGTGCACGTTTGAGTGGTTTTATAGTGCAATTGATTACCCTTGGTTTGCCAAAAGAGAGTTTGAGGAGTACTTAAATCATGTTGGACTTGGACACATTCCGAGGCTAACTCGTGTTGAATGGGGTGTGATTAGAAGTTCCCTGGGAAAACCTCGGAGGTTTTCTGAGCACTTCCTATCTGAAGAAAGAGAGAAACTTAAACAATATCGGGAATCTGTGAGAAAACATTATGCTGAACTCCGCACTGGTGTTAGGGAGGGACTTCCAACAGATTTGGCAAGACCTTTATCAGTTGGACAACGTGTCATCGCTCTTCATCCCAAAACAAGAGAAGTTCACGATGGAAGTGTGCTCACTGTTGATCACGATAAGTGCAGGGTTCAGTTTGATCGTCCAGAGATAGGTGTTGAATTTGTCATGGAAGGATATGAAGCGGACGTCCGCACTCGGCTTAAAGTGCGCATGTCCCTCCGTTCACCACCGTCCGGCGCCGACATGACGGCGCGCCTCCACCCCAGTGGACTTCAGCAGCGTCCCCGATCACTTTCCCTCCCAGGCGAGTCCGCCGAATTCCAGTTTCCGACGAGATCGACTTTATTTGAAGTTTTGGGTGATCTCGCCGGAAAACAGGATGTGGATTGTATGCCTTCAAACCCATTGGATAACATGCCTGAAGCCCTTAAGAGACAGAATATTGCTTTTGACAAATTCCCTCTCACATTACCCCATATGAATGGGAATTTAAATTTTGAAAGACCTGTGATGAATGTTTCAAGTGGGCTTTTGGAGAAAGATCCCAGCCCCATGAATACTTCCTTACCGCAGGGAAAGGGAGATACAAACCATATAATTTCACAACCAAAAGGAGCATCTGTTGATATTGCTGGTGCACAGACAGCGGTTAGTCAACCTGGCGTGGTGGCACACAATCAAGCAAGGGAAGCTGATATACAAGCTCTTTCAGACCTGAATCGTGCTCTTGACAAAAAGAAAGCATTGTTGATGGAGCTTAGCACAATTAATAACATCCTGGAAAACCAGAACAGTGGAGAATGCTCTTTAAAAGATTGCGATAAGAAGCATTACGCCACAGAATCTTCTGCTTTGCTTAATTTGAGGCACCGAAATACTTACCCTGGAAATACCCTGCCTCCTTCGCTGAAATACCCAACGAATTCCACAGTCTATGGGAGCCTCCCTAGTTCCTTTGATATATCTACTTCTCAAGAGTCAGGATCCAGCGTTGCTGAAATTGTAGAAGTTTCAAGATTGAAAGCACATACTTTGGTAAATGCTGCTGTTCAGGCAATGTCATCAAGGAAGGAAGGGGAAGAAGCTTATGTAAGGGTAAGGAGAGCTCTTGATTCCATCAATATTCAGAATCTGACATCAGACTCTAGGTCAGCAGTCAACAGGACTCAAGAGCAGGTCAATGGCACATTGGGACATCGCAACCAGTTGACTTCCGTTGCATCAGAGCCCAACACTAGTGATTCATCTGGTCCCAAGTTACATACTGAGACGGATAAAAATGAATCACAGATGCTTTCGGAGGTTATCACTGCTTGCGTCATGGCTATGAACATGATACAGACATGTACTGAACGACAATATCCTCCGGCTGTTGTGGCTCAAGTATTAGATTATGCAGTCACAAGCTTGCATCCACGTTGTCCCCAAAATGTTGGAATGTACAGAGAAATTCAAATGTGCATGGGCAGAATCAAGACCCAGATATTAGCACTCGTGCCAACTTGA
Protein Sequence:
- >mrna22515.1-v1.0-hybrid|Fragaria_vesca|MYB_related|mrna22515.1-v1.0-hybrid
MAPTRKAKTVKRYSNLSEASPGGKNKQGKRKFTDQLGPQWSKGELQRFYEAYRKYGQNWKKVAAVVRNRNIEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSESERESNDAIRYSRKPQKRKLGKDSVSKDMFQPHSTASVDGCLSHLKRRRLDGNQPRAVGKRTPRFPVQYSSKKDDGENYASPIRKGRKSEADNEYDVAKVAALLTEASHRGGSPRLSQTPYRRFTVQSSQRMQPPSWKARADLRDASMEEDCLEGSVGSRGAETGDYTRDSSSLMDMEGVGTVEIRRGKKVYGKKEKVKDIGNHQFDDGGEACSGTEEGLHVSTKGKTDIEVSDAKGDQFYSQVPRQECGKPYFGDDSAELDALEALHTLADLSLMMPASTMESGSSMQLKDERTASEMEEKSNMPESTSTSQFRNKNKLPGGKQREPIADSRTEGTNAKKSKLARDSTPIDINVVSESEQLHSTSKSWRRKRKPTVSKISNAEANIDSTVNEPSYSEVFGQEENKSVVKGRRTGQISTPSKQWKSVRPGDGSLNSDFGQTVSNVMVATAEGRPTAKQVHSPTKQSRRKRYLPRATVPKSSENILKTQLHKHSNSLQDRILYLKEKMSCCLSSHLVRRWCTFEWFYSAIDYPWFAKREFEEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRFSEHFLSEEREKLKQYRESVRKHYAELRTGVREGLPTDLARPLSVGQRVIALHPKTREVHDGSVLTVDHDKCRVQFDRPEIGVEFVMEGYEADVRTRLKVRMSLRSPPSGADMTARLHPSGLQQRPRSLSLPGESAEFQFPTRSTLFEVLGDLAGKQDVDCMPSNPLDNMPEALKRQNIAFDKFPLTLPHMNGNLNFERPVMNVSSGLLEKDPSPMNTSLPQGKGDTNHIISQPKGASVDIAGAQTAVSQPGVVAHNQAREADIQALSDLNRALDKKKALLMELSTINNILENQNSGECSLKDCDKKHYATESSALLNLRHRNTYPGNTLPPSLKYPTNSTVYGSLPSSFDISTSQESGSSVAEIVEVSRLKAHTLVNAAVQAMSSRKEGEEAYVRVRRALDSINIQNLTSDSRSAVNRTQEQVNGTLGHRNQLTSVASEPNTSDSSGPKLHTETDKNESQMLSEVITACVMAMNMIQTCTERQYPPAVVAQVLDYAVTSLHPRCPQNVGMYREIQMCMGRIKTQILALVPT*