Information report for mrna21830.1-v1.0-hybrid
Gene Details
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Functional Annotation
- Refseq: XP_004292009.1 — PREDICTED: transcription factor TFIIIB component B’’ homolog
- TrEMBL: A0A2P6PPK1 — A0A2P6PPK1_ROSCH; Putative transcription factor MYB/SANT family
- STRING: XP_004292009.1 — (Fragaria vesca)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g005589m
- Malus domestica: MDP0000178901
- Prunus persica: Prupe.8G091800.9.p, Prupe.8G091800.7.p, Prupe.8G091800.5.p, Prupe.8G091800.4.p, Prupe.8G091800.2.p, Prupe.8G091800.8.p, Prupe.8G091800.6.p, Prupe.8G091800.3.p, Prupe.8G091800.1.p
- Pyrus bretschneideri: Pbr012440.2
- Ricinus communis: 30131.m007077
- Vitis vinifera: GSVIVT01023816001
- Ziziphus jujuba: XP_015892528.1, XP_015892526.1
Sequences
CDS Sequence:
- >mrna21830.1-v1.0-hybrid|Fragaria_vesca|MYB_related|mrna21830.1-v1.0-hybrid
ATGGATGATCTTGATTTTGAGCCTACCGGGCCTGTTCGTGTTGCTGGCAGATTTCGGCCCAAGGCAAAGCCCAAGTCTACGAAAGCAGCATCTACTTCAGCAGTTTCTGATCTCCCTAATGTTGGAAAGGAAAATTCTAACCCAGTATCTAGCACTGTCTCGGATACTGTTCCATCTGCTACATCTGTTGATGTTGGAGTGGTCAATTTAACATGTCTGGTTGGTTCGTCCTCAGAGATCTCCGGAAGCCTAGAGCCATCAGGAAACAATGAGCATTTATGCTCAAGTGTACCGTCCTTTGATGGTGACGGAATTGCCGAGCCTTCTACAGCTGCAGGAGATACTCCACAACCATCAATTGTTGTTGTACCATCTAATGTTAGTGACGGTTCACACTCTATCTTTGGAAAATCAGCTGGCGGGAATGCAGACAAATTCTCAGGATTGGAAGGTCTTGACAATTTTCATGCCCAAACTACAAGTGGTACAGAGCCTGCTTTGACAAAGTCCCCTGACAAGGTCAATGAGGGAAACTGTAGTGCTCGTACACATTTTCCTGTTGAGTCTTCCGCAGTCTTAGCATGTGATGTTGCAGAAGCTCAAACTGTTTCTGATTATTGTGCAACCCAAGAACCAGTATCCTGCACAGAAGCTGCTATGACCAACAAACATGGTGAAATCCGGTTAGAAACAAAGGAGTTTCAAATTTTGGACGATGTCTCTGATGCTCCCTTTACATCTGGACTCCGCCATCATGGAAAATTTCCACCCAAGCTAAGAGTCAAAAAAGGAAAAAACAGTCCAAACATACCTCACTCTGAAGTAGGTGATATGGATGAGAGCACACTTTGTGCCTTTCTCCCAGGAGATGTTCATGATCACATTTCTCCCACTATTGGTGATTCTATAGCCCCAAATCCATCCCCCAATTTCCAAGCGAATGCAGAAAGCCTTGCAGAAGCTACTCAGTTAGATGAGGCTGTTTCTAATGGTGCTGCTCATTCAGAGGGTGTTTGTGGGAGGGGTCATGATAGTGGAAATGGAAAAGGTTCCACAGCATCAAATTGTCCTCAGACTCGCAAATATTCAGCTTCTAATAGGGAGGCTAAAGATGGGACATCATCCAGGAAGTCAAGGAAGGGGTTACCCCATCAAGAAGTTGATGACCTAGGGAACAATACTAATGAGGACAGCTTCAATGCTGAAAATTGTAGTGATTTTAATGGCAACGAAGATAGGGAGCATAATATAGAACGGAGAAAAAGAGCCCCAAGAAAGTCCAAGATATCTGTATCTGAAAATGAAAAACCAGTTCAAAAGCGTAAAAGGACTAAGAAAGCACCTGATGAACCAACTGAAGAACCGACCGAAAAGAAGTTCTCACATTCAACTCGTAGAAATACAAGACACGCGAAAAAGGCTTTGCTTGTGATCCCAGAGGATGAAATTGATCCTCAAAAAGTGCCTCTGAAGGATCTTATTCGGCTAAAAGAGTACAGGGAGCGCGTAGCGATTAAAGAGGCAGCCAAGTTGAAAGCTTCTGCATCCCATCAAAGTGCTTATCACGAGTTTCAGAAGGATCCTTCTCATAATGAAGAGGAGGACTTTGGTTTCGAACAGGACAGAAGCTCTGGTGAAGATCAAGCAGGTTACGGGGATAGGGTTAGCACAAGTTCCTCTAGCTTCAATTACCAGTCTTTTATGAACAAAGAACGCCCTTCTAAGTGGGTCCAACAAGACACAGAACTTTTCTATGAGGGCATTGAACAGTTTGGATCCGATTTTAATATGATCGCACAGCTTTTTCCTGGTCGAACACGTCATCAAATCAAGTTGAAGTTCAAGAAGGAAGATCGTCAAAATCCATTACGTATCACTGAAGCCTTTCGCCGTCATTCCAAAGACAATTCAAAATATGTTCTGGTGATCAATGAGCTGCAAAAAGTTGCTCGGGAAAAGCAGGAGTCTAATGCAGATGAGTCGAATGACCTGGAGGAGTTAGAGCTGACTCATGATAATGATGGGGGAGTGACAAAACCTGAGTCGGATAAAATTGATGATATGAAAACCGATGTTGCTGCTGAAGTTCAACACGATGAGGCTGATATTGCTGAAGTGCATAGTCCCACGAATTCTGATCAATGTGATAATGGTGATGGTTTTGGCGGTTGGGATGATGACTTTTAG
Protein Sequence:
- >mrna21830.1-v1.0-hybrid|Fragaria_vesca|MYB_related|mrna21830.1-v1.0-hybrid
MDDLDFEPTGPVRVAGRFRPKAKPKSTKAASTSAVSDLPNVGKENSNPVSSTVSDTVPSATSVDVGVVNLTCLVGSSSEISGSLEPSGNNEHLCSSVPSFDGDGIAEPSTAAGDTPQPSIVVVPSNVSDGSHSIFGKSAGGNADKFSGLEGLDNFHAQTTSGTEPALTKSPDKVNEGNCSARTHFPVESSAVLACDVAEAQTVSDYCATQEPVSCTEAAMTNKHGEIRLETKEFQILDDVSDAPFTSGLRHHGKFPPKLRVKKGKNSPNIPHSEVGDMDESTLCAFLPGDVHDHISPTIGDSIAPNPSPNFQANAESLAEATQLDEAVSNGAAHSEGVCGRGHDSGNGKGSTASNCPQTRKYSASNREAKDGTSSRKSRKGLPHQEVDDLGNNTNEDSFNAENCSDFNGNEDREHNIERRKRAPRKSKISVSENEKPVQKRKRTKKAPDEPTEEPTEKKFSHSTRRNTRHAKKALLVIPEDEIDPQKVPLKDLIRLKEYRERVAIKEAAKLKASASHQSAYHEFQKDPSHNEEEDFGFEQDRSSGEDQAGYGDRVSTSSSSFNYQSFMNKERPSKWVQQDTELFYEGIEQFGSDFNMIAQLFPGRTRHQIKLKFKKEDRQNPLRITEAFRRHSKDNSKYVLVINELQKVAREKQESNADESNDLEELELTHDNDGGVTKPESDKIDDMKTDVAAEVQHDEADIAEVHSPTNSDQCDNGDGFGGWDDDF*