Information report for mrna18432.1-v1.0-hybrid
Gene Details
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Functional Annotation
- Refseq: XP_004302721.1 — PREDICTED: telomere repeat-binding protein 5-like
- Refseq: XP_011466551.1 — PREDICTED: telomere repeat-binding protein 5-like
- Refseq: XP_011466552.1 — PREDICTED: telomere repeat-binding protein 5-like
- TrEMBL: A0A2P6RA03 — A0A2P6RA03_ROSCH; Putative transcription factor MYB-HB-like family
- STRING: XP_004302721.1 — (Fragaria vesca)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Populus trichocarpa: Potri.006G086500.1, Potri.009G032000.1, Potri.009G032000.4, Potri.009G032000.2, Potri.009G032000.3
- Prunus mume: XP_016646754.1, XP_008240809.1, XP_008240801.1
- Prunus persica: Prupe.6G256900.4.p, Prupe.6G256900.3.p, Prupe.6G256900.2.p, Prupe.6G256900.1.p
- Pyrus bretschneideri: Pbr033536.1, Pbr038996.1, Pbr004606.1
- Vitis vinifera: GSVIVT01024936001, GSVIVT01034156001
- Ziziphus jujuba: XP_015874013.1
Sequences
CDS Sequence:
- >mrna18432.1-v1.0-hybrid|Fragaria_vesca|MYB_related|mrna18432.1-v1.0-hybrid
ATGGTACCACAGAGGAAGGTGGATTATGGCTTCAATGGCTACCAAATGCCTGAGGTTCCTCGAGCTTCTAGATCAGCTAGGGGAAAGGGACCTATAAGGAAGAAACTTGAAGACAATCAGATTCATGCATTTGAGATTTTGGCTAGTGTAGCGGGTAAACTTTTGGAGAGTGAAAATCCTCTACCTAGTAATGCTTCTTGTGGAAAGGATCCTCATTACATGGTTGATGATATCATAGGGAAGCAACAGACTGAAGGAAACTCATTGAAGGAAGAACTGTGTGAGTTGGGAAGCTGGGAAGATGAAGCCTCTCAACTTGCCTGTGGGGTGCAAGGTCACCAACAAAGTCATACTCTGAATCAGTTCTCACATCCACAAGAAAACTTCAGTTTTGAGATGAGCGCAACATCAAAAAGTAATGATCACTTGGGGAAGGTTTGTTTTGCTAAAAAGTTGGGTACAGTTGATAGCAGTTCTTCTTGTGGAAGCTATTCTAACAAAGTAATCAGTGACTGTCCCTTATCTGGGGATTTGATTGATGAGGAAGAGAAAGCACATGCTGTACAAAAGAGGAAACTAGAGGCTGAACCTTCAAAGGATACAAACATAAAGGATGCAAATGCCCATGTTTTAGTCTGTTCAGAAGATTGGATAGAAATGAAAGGAAACCCTCCTGAACTGGTCAGTTCTGAACATGATGTAAAGGAGCCTTTCTCAGGGGACTGCAAAATTCATGGTTCTTTCCTCTGCCATTGTGTTAAAGTAATTAGTAGAGATGATGACGAAAATTCTGTTGGGTATGTCCAACCCTGTACCATCATAGAGGAGTTTGAGCACAAACCAAATGTTGGTGATAGGAAAATAAAGAATATGTCGGCATCCAAGCGCTGGAGAATAGCTCCAGATATGAAGATTGGGGGTTATCATAGAACTGATGGGAAAGTTTACCGTAATGGGAGACCTTGTTACGCGCATCAAAGATCACAGAAGAATTATCCTTTTAAGAAGAGAAAGTTCTTTAACCAGAAGCCATTTGCTACGTCTGATAGAGACTGTAACTGTGAAAACATAGTTAGTTCTCCTGACAACAGAGAGGACGGTGGCAACTGTAATGCAGGTTTGATGTTGATTGCTCTATTACATGCAGCAAGTGGACGGTCATCCTCAGCAACAGGTCGAGAACCTCTCAAGTCCAGTGATCGTAATGTGAGGCTTAGTATTAAATCCTTCAAAGTTCCCGAGCTTTTCTTTGAAATTCCCGCAACTGCAACTGTCGGTTCTTTGAAGGGAAAGAAGGTCAGAGATGACAACAAAACATTACTTCAGACTGGGATTTCGCATGATGACAAGCTTGACAATTTGGGTTTCTCCTTGGAGCCCAAACATACAAAGCTGATGTATTCTCAATGCGGCGATGATCCTTCCTCTGTATCTGGCAGACGCCAGGAGTTAATTAGGCATTCGTCTTTGGTCTCACGACCAAGGACTTCAAATATCTCTCTGAATCCTCCGATAATCAATTTGGGCAGCAGTGTTGACAAAGACTTAAAAGCAGTACTCCCTCCTGCTAGTACTTCAATTGACAAATCTCCACCAGTATCCCAAGCTCTGGTTGCAGTTCCACCAATTACCGCAAAGCCACTGGCTGTGGTTCCTTTTCATAGGAGATCTGGGCATTCAGCATATGTACAGCGCCGGATGAGGAGACCTTTCTCTGTTTCAGAAGTAGAAGCATTGGTTCAGGCTGTTGAGAAACTTGGAACGGGAAGGTGGCGTGATGTTAAAATGCATGCTTTTGATAATGCAAAACATCGTACTTATGTGGATTTGAAGGACAAGTGGAAAACATTGGTGCACACAGCAAGGATCTCACCTCAGCAAAGGAGAGGAGAACCAGTTCCTCAGGAGCTTTTGGACAGAGTCCTAGCCGCACATGCCTATTGGTCTCAACGGCAAGCCAAGCAACAGCTCAGAGTAGCGGCTTGA
Protein Sequence:
- >mrna18432.1-v1.0-hybrid|Fragaria_vesca|MYB_related|mrna18432.1-v1.0-hybrid
MVPQRKVDYGFNGYQMPEVPRASRSARGKGPIRKKLEDNQIHAFEILASVAGKLLESENPLPSNASCGKDPHYMVDDIIGKQQTEGNSLKEELCELGSWEDEASQLACGVQGHQQSHTLNQFSHPQENFSFEMSATSKSNDHLGKVCFAKKLGTVDSSSSCGSYSNKVISDCPLSGDLIDEEEKAHAVQKRKLEAEPSKDTNIKDANAHVLVCSEDWIEMKGNPPELVSSEHDVKEPFSGDCKIHGSFLCHCVKVISRDDDENSVGYVQPCTIIEEFEHKPNVGDRKIKNMSASKRWRIAPDMKIGGYHRTDGKVYRNGRPCYAHQRSQKNYPFKKRKFFNQKPFATSDRDCNCENIVSSPDNREDGGNCNAGLMLIALLHAASGRSSSATGREPLKSSDRNVRLSIKSFKVPELFFEIPATATVGSLKGKKVRDDNKTLLQTGISHDDKLDNLGFSLEPKHTKLMYSQCGDDPSSVSGRRQELIRHSSLVSRPRTSNISLNPPIINLGSSVDKDLKAVLPPASTSIDKSPPVSQALVAVPPITAKPLAVVPFHRRSGHSAYVQRRMRRPFSVSEVEALVQAVEKLGTGRWRDVKMHAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQRQAKQQLRVAA*