Information report for MLOC_60197.2
Gene Details
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Functional Annotation
- Refseq: XP_020166067.1 — SWI/SNF complex subunit SWI3D isoform X1
- TrEMBL: F2DG81 — F2DG81_HORVV; Predicted protein
- STRING: MLOC_60197.2 — (Hordeum vulgare)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >MLOC_60197.2|Hordeum_vulgare|MYB_related|MLOC_60197.2
ATGAAATTTCATGCCAATCCTCAGCTGCAGCTGGAGCCCAAAGATTTGGCTGAGCTGTCAGTTGGGGAGGTCGATGCTCGACAGGAAGTGTTTGATTTCTTGGATCACTGGGGCCTGATCAATTTCCACCCTTTTCCACCTGCTGACCTAGAAGAGAGTAAGCCAGAGGAGAGCCAAAGTGATTCTCTTAATGAGGAGAAAGCTTCTCTCATTGAGAAGCTGTTTAAATTTGAACCGATTCAGTCATACATGATTCCCTTACCAAATAAAGGGGATGTGGAAATTCCAGTGCCTCTGCCTAGCTTGCTTCCTGATCCTGTTCTAGTGGAAGATGTAATTGCAGCAGCTGAGCCTTCCGTTGAGTACCACTGTAACTCCTGTTCAGTTGATTGCTCGGGCAAGCGCTATCACTGCCGGACCCAGGCAGATTTTGACCTGTGTTCTAACTGCTACAACGAAGAAAAATTCGATCCAGGCATGTCCAAAACAGACTTCATCCTCATGGATTCCACAGAAGTTTCTGGTGCTCGTGGTACTAGCTGGACTGATGAGGAGACATTGCTTCTCTTAGAAGCTCTGGAAATTTTTGGTGGAAAATGGACTGAGATTGCAGAACATGTTGCTACAAAAACAAAAACACAGTGTATGTTACACTTTCTTCAAATGCAAATTGAGGATCACTTCCATGATGGTGATGATATTCACCAAAATATCCAGGAAAACACAGAGCAAGCCTTGGCAGAAAAAGGCACCCCTGAAGTACCCGAGAAAATGGAAATTGAAGAGAAAGTTGAAGGAAAAGATACCGAGGATGAGAAGCCTTCAGAGAAAACGGAAGGCAACCACACAGAAGAAAAAACAGAAGAAGGAAGTGTTGTTGAAAATAAAGATGCCAAAAATTCAGGTGGTGCAGATTCGGTTACAACACCAAACGTTGATGATCCAAAACCATCTTCTGATACTGACCTGGCAAAGGAAAATTCTGTTAATCTTGATACTTCTGACAAAAATGCGTCAGATGTTGCTATTGATATTTCTGGTGAAAATGCACCAAACAATGCTATTGATATCCTGAAATCTGCATTCGAGGCCGTTGGTCACTTCCCCGGACATGAAGGTTCATTTGCTGATGCAGGAAATCCTGTTATGGCACTGGCAGCATTTTTGGCTGGTCTTGTGGAAGATGATAATGCTACCACTTCTTGCCGTAGTTCACTAAAAGCTATCTCTGAGGATTCTCCTGCACTACAATTGGCAAGTAGGCACTGTTATATTCTTGAAGATCCACCGAGCGATCTGAAAGACATTTTTGTCAGTGTAAGTAATACAATTAAAGATGACGATCAGGCAAAAGATGACGATATGGTTATAGATTCAACTGGTACTGAGAAAAAGGACATCAATGAGAAGGAAGAGAATGTTGTGTCTGTGGAAAAGCAAAACAGTCCATCCATTTCACCAAAGGACAACCAAGAATCAGATAATAAAAATGTATCTTGTGATAATGAAGCACCCACAGTGGAGCCTAAATCCATTAAAGCTAAGGAGTCTGATGATCCAATTCCTATGGTGGATAAGAGTGCGTCCAACGACACAAAAATTCCATCAAGTTCTACCAAAGATTCAGTTGCTCCAGAAAATAGTGCAAATGGATGTGGTTTGACAGCTTCTCAAGAGGTTGTTGCAGGAAGTACTACAAGTGCAACTAATCCTGAGCTGTTAAAGGACAAACAAAATCCTGAGCTGTTAAAGGACAAACCAAGTTCTAAAGTGGAGCCAGATGATGATTCACCTTCACAAGGCAAGATCGAGCTTAACAAGACTGAAGATGCAGTTGCTACCCCAACTGCCGTACAAGAAGACGAGAAGACCCATACATTGGGGAATGGCAAGCTGGAAGAACCTAACATTGCTGAAAACGCTCCTGCCGATGGAGAGACGGGCTCAAGGGTGACCGCTGAGCATAGTGATTCCTTAACTAGGCTAAAACGAGCAGCAGCGACTGCTGTTTCAGCAGCTGCTGCGAAGGCTAAGCTCCTTGCTGCGCAGGAGGAAGATCAAATTCGACGACTAGCTGCACTGGTGGTTGAGAAGCTGCTGCAGAAGACGGAGGCGAAGATGTCGTTATTTGCAGATGTCGAGCATGTGGCCCTGCGCACAAGAGAATACACTGAAAAGACCAGAAAGAAGCTGCTGATGGAGCGGAACGCGATAATCGCTGCTCGCATGGGTGCACTGCCATCCAGGCCAAACCAGCAGGGTGCTCCTGGGAACAGATTGCCGCCTGGATATGGCGCCCCTGCAGTAAGACCGCCGAACGCAATGCCCCGGCCGAGCAGCTGA
Protein Sequence:
- >MLOC_60197.2|Hordeum_vulgare|MYB_related|MLOC_60197.2
MKFHANPQLQLEPKDLAELSVGEVDARQEVFDFLDHWGLINFHPFPPADLEESKPEESQSDSLNEEKASLIEKLFKFEPIQSYMIPLPNKGDVEIPVPLPSLLPDPVLVEDVIAAAEPSVEYHCNSCSVDCSGKRYHCRTQADFDLCSNCYNEEKFDPGMSKTDFILMDSTEVSGARGTSWTDEETLLLLEALEIFGGKWTEIAEHVATKTKTQCMLHFLQMQIEDHFHDGDDIHQNIQENTEQALAEKGTPEVPEKMEIEEKVEGKDTEDEKPSEKTEGNHTEEKTEEGSVVENKDAKNSGGADSVTTPNVDDPKPSSDTDLAKENSVNLDTSDKNASDVAIDISGENAPNNAIDILKSAFEAVGHFPGHEGSFADAGNPVMALAAFLAGLVEDDNATTSCRSSLKAISEDSPALQLASRHCYILEDPPSDLKDIFVSVSNTIKDDDQAKDDDMVIDSTGTEKKDINEKEENVVSVEKQNSPSISPKDNQESDNKNVSCDNEAPTVEPKSIKAKESDDPIPMVDKSASNDTKIPSSSTKDSVAPENSANGCGLTASQEVVAGSTTSATNPELLKDKQNPELLKDKPSSKVEPDDDSPSQGKIELNKTEDAVATPTAVQEDEKTHTLGNGKLEEPNIAENAPADGETGSRVTAEHSDSLTRLKRAAATAVSAAAAKAKLLAAQEEDQIRRLAALVVEKLLQKTEAKMSLFADVEHVALRTREYTEKTRKKLLMERNAIIAARMGALPSRPNQQGAPGNRLPPGYGAPAVRPPNAMPRPSS