Information report for MDP0000239354
Gene Details
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Functional Annotation
- Refseq: XP_018502609.1 — PREDICTED: telomere repeat-binding factor 1 isoform X1
- Refseq: XP_018502610.1 — PREDICTED: telomere repeat-binding factor 1 isoform X1
- Swissprot: Q8VWK4 — TRB1_ARATH; Telomere repeat-binding factor 1
- TrEMBL: A0A498I0M8 — A0A498I0M8_MALDO; Uncharacterized protein
- STRING: XP_008341414.1 — (Malus domestica)
- GO:0006334 — Biological Process — nucleosome assembly
- GO:0006357 — Biological Process — regulation of transcription from RNA polymerase II promoter
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0000786 — Cellular Component — nucleosome
- GO:0005730 — Cellular Component — nucleolus
- GO:0003691 — Molecular Function — double-stranded telomeric DNA binding
- GO:0033613 — Molecular Function — activating transcription factor binding
- GO:0042803 — Molecular Function — protein homodimerization activity
- GO:0070491 — Molecular Function — repressing transcription factor binding
- GO:1990841 — Molecular Function — promoter-specific chromatin binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Arachis hypogaea: Ahy019279
- Cicer arietinum: XP_004511830.1, XP_004511829.1, XP_004511828.1, XP_004511827.1
- Fragaria vesca: mrna05764.1-v1.0-hybrid
- Glycine max: Glyma.01G194600.2.p
- Manihot esculenta: Manes.13G111100.3.p, Manes.13G111100.1.p, Manes.13G111100.4.p, Manes.13G111100.2.p
- Prunus mume: XP_008237830.1, XP_008237823.1, XP_008237815.1, XP_008237807.1
- Prunus persica: Prupe.6G219800.2.p, Prupe.6G219800.1.p
- Pyrus bretschneideri: Pbr024323.1, Pbr001056.1
- Ziziphus jujuba: XP_015890309.1, XP_015890310.1
Sequences
CDS Sequence:
- >MDP0000239354|Malus_domestica|MYB_related|MDP0000239354
GAATACAAAAGTTTGGTTCAAATAAAAAATTTTCAAAAGCAAGTCCTCTTCGTTAACTTCCAAGAGTTTGTAAAGATTCTTCAAATTTCGGATTATCCAATCGATCTCTCAGCTGCCCACATTTTCGTCAGCTTCTCAGTGATTTCTCCGATCCGGAATTGCCGACATGCATTGCCATTTGATTCAATTGATGTGAATTTTCTTAGTTGGATTTCGTTCTGGGAGGGTTCTGGATTTCGGTTAATGGGTGCTCCTAAGCAGAAGTGGACCGCCGAAGAAGAAGCAGCCCTTAAAGCTGGAGTACTTAAACACGGGGCAGGAAAATGGCGCACAATACTGACAGATCCAGAATTCAATACTATCTTACATCTGCGTTCAAATGTTGATCTCAAGGACAAGTGGAGAAATATAAATGTGACCGCAATATGGGGTTCTAGACAGAAGGCTAAGCTTGCACTTAAAAGGAACTTACCAACTCCTAAACACGAGAACAACCCTTTGGCCGTGAGCACTGTAATCCAAAGTCATGAAGAAGTTGTTGACGCTAAGCCTCTTGCCATTTCTGGTGGAAAGTCGCAGACTATTGAATCAAAAGATTCAAAACAACCAATTGCCAGGTTGGATCACCTTATATTAGAGGCTATTACAAATTTGAAGGAGCCAGGGGGATCTGACAGAGCTGCAATTGCTATGCACATAGAGGAGCAATATTGGGCACCACCAAAACTTAAAAAGTTACTGTCATCAAAATTAAAGAATATGACAGCCACTGGAAAGCTGATTAAGGTCAAGCATAGATACAGAATTCCATTAAGTTCAGCTACTTCTGAAAAAAGAAGAAGCTCTTCAGCGTTGCTCTTGGAAGGAAAGCAGAAGGATTCATTGAGAAAAGATAAGAGTGACGTCAACATCCTTACTAAATCCCAAGTAGATGCAGATTTAACCAAGATGAGAAGCATGACTGCACAAGAGGCTGCTGCTGCTGCTGCACAGGCGGTAGCAGAAGCAGAGGCTGCCATTGCAGCAGCTGAGGAAGCAGCAAGGGAGGCGGAGGCTGCAGAAGCTGAAGCAGAAGCAGCACAAGTTTTTGCCAAAGCAGCAATGAAAGCATTGAAATGTAGAAAACTTGGTAAAGTTCTCTTAAGCAATTTCGCATCATGA
Protein Sequence:
- >MDP0000239354|Malus_domestica|MYB_related|MDP0000239354
EYKSLVQIKNFQKQVLFVNFQEFVKILQISDYPIDLSAAHIFVSFSVISPIRNCRHALPFDSIDVNFLSWISFWEGSGFRLMGAPKQKWTAEEEAALKAGVLKHGAGKWRTILTDPEFNTILHLRSNVDLKDKWRNINVTAIWGSRQKAKLALKRNLPTPKHENNPLAVSTVIQSHEEVVDAKPLAISGGKSQTIESKDSKQPIARLDHLILEAITNLKEPGGSDRAAIAMHIEEQYWAPPKLKKLLSSKLKNMTATGKLIKVKHRYRIPLSSATSEKRRSSSALLLEGKQKDSLRKDKSDVNILTKSQVDADLTKMRSMTAQEAAAAAAQAVAEAEAAIAAAEEAAREAEAAEAEAEAAQVFAKAAMKALKCRKLGKVLLSNFAS