Information report for MDP0000189406
Gene Details
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Functional Annotation
- Refseq: XP_008392379.2 — telomere repeat-binding factor 4
- TrEMBL: A0A498J0K9 — A0A498J0K9_MALDO; Uncharacterized protein
- STRING: XP_008392379.1 — (Malus domestica)
- GO:0006334 — Biological Process — nucleosome assembly
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0000786 — Cellular Component — nucleosome
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn115281
- Citrullus lanatus: Cla012595
- Citrus sinensis: orange1.1g024102m, orange1.1g023740m
- Cucumis melo: MELO3C013078P2
- Cucumis sativus: Cucsa.341020.1
- Gossypium arboreum: Cotton_A_02679_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D05G1306, Gh_A05G1133
- Juglans regia: WALNUT_00011671-RA
- Manihot esculenta: Manes.04G141700.1.p
- Prunus mume: XP_008228252.1, XP_008228251.1
- Prunus persica: Prupe.3G045300.5.p, Prupe.3G045300.4.p, Prupe.3G045300.3.p, Prupe.3G045300.2.p, Prupe.3G045300.1.p
- Pyrus bretschneideri: Pbr032023.1, Pbr015263.1
- Ricinus communis: 29706.m001328
- Ziziphus jujuba: XP_015890673.1
Sequences
CDS Sequence:
- >MDP0000189406|Malus_domestica|MYB_related|MDP0000189406
ATGGGAAACCAAAAGCAAAAGTGGAMGGMGGCGGAGGAAGAAGCCCTACTCGCCGGAGTAGCGAAGCACGGACCAGGCAAGTGGAAGAACATCATCAAAGATCCCGAATGCGCCCCTTTCCTAATTCACCGCTCCAATATCGACCTCAAGGATAAGTGGAGGAACTTGGGTGTTAATTCTTGTGGACATGGTTCTAAGGAAAGACCAAGGGCTACAAAGATTAGAAAGGTTGTGGGTACCCAGCATGACATTGTTCAGAGCCCTGCTTCTGCTGCTTCAGTTCGACCCAATGCATCTCTCGTTGCTGTCACGAACGATGCTTTGAGTACAGCATCTGATGGGAAAAATGCTCCAAGGTATGATGCAATGATTTTTGAGGCCCTTTTAACGATGAAAGATAAGGATGGATCTACTATAGGTGCCATTCTTAACTATATTGAGCAAAGGCATGAGGTGCCTGTACCAGCAAATTTCAGAAGGGTTTTGGGTACAAGGTTAAGACAGCTTGCTATGCAAGGAAAACTGGACAAGGCACAAAATGGTTACAAGATAAAAAAGGATGTAACTTTGGTAGCAGAAACACCTATATCTACTCCAGATCAAAAGGAAGTGAGGCCGTGGAAGTTGCAGAATTATGTGCCAATGATCTCTACCGAAACAGTGAAGGATGCAGCTGATAATGCTGCCTACAAACTCGTGGATGCTGATAACAAATGCTTTCTGGCTACTCAAGCAATGAAGGAAGCAGAAAGAGTTTCAATGATGGCAGAAGATACCGACTCAATGCTACTGTTAATGGAAGAGATTTATGAACAATGTAAGTATGAAACTTGTATGTGTACTTTAGTCGTTGTTTGCGTGGTGAAGTCGTTGCCTTGGCTTAGGTCTTCAATTAACGGTGTATGTAAATTCACTGATCCAATCGAACAGTTTAAGCTTTCTTTTGTCATGAAAATGCATTCGAATTCTGTTATACCAGAAGTCAATTCCATTTGGATGCGCGATGACACATCAACTGGTGACAAAATTTTGTCAAATGATACGACTGTGTCGGGTCTGGTGGTCGCCACTTTAGGTTTGGTGGCCCCCATTTCTTGGCCGAGACACGAATGCCAACACATTGAAATAGGTATCATTACCTACACCATCAACATCCTCGTTACCGTTATATTCTTTTGCGTTCACCAAATGCTGAATATCCGTGACATGAGCATTTGCACCGGTGTCCAGGAGCCTTTGTCCATTGTTCTACCTGTTGAGAGTGATAGGGCAGGATGCCCCAGTTTTCCACATATTTGGCAGCCTCGTTGGTTGGCAGCACCAGCACCACGAGTGGACGGAAACACACCACGTCTACTTCCACGAGATCGTCCACCACGACCTCTAGTAGTCACAAAGGCATTAGCAGGAGCAGCCTCCACAAGAGGCGCAGTTTGCTCCGTCATTCTTCTCTCCGTGGTCAGCAGGAGAGCTTCAAGAGTAGGATACGTGATTGGGGTATCAGTGTATCATGTGCCTGAGCAGCGTTCAGTCATTTCATATGTAGGATACGTGATTGGGGTATCAATGGACCCATCAACGTACCCCATCAAGTCACGGCTTTTGAGGATTGGGAGAATCTGA
Protein Sequence:
- >MDP0000189406|Malus_domestica|MYB_related|MDP0000189406
MGNQKQKWXXAEEEALLAGVAKHGPGKWKNIIKDPECAPFLIHRSNIDLKDKWRNLGVNSCGHGSKERPRATKIRKVVGTQHDIVQSPASAASVRPNASLVAVTNDALSTASDGKNAPRYDAMIFEALLTMKDKDGSTIGAILNYIEQRHEVPVPANFRRVLGTRLRQLAMQGKLDKAQNGYKIKKDVTLVAETPISTPDQKEVRPWKLQNYVPMISTETVKDAADNAAYKLVDADNKCFLATQAMKEAERVSMMAEDTDSMLLLMEEIYEQCKYETCMCTLVVVCVVKSLPWLRSSINGVCKFTDPIEQFKLSFVMKMHSNSVIPEVNSIWMRDDTSTGDKILSNDTTVSGLVVATLGLVAPISWPRHECQHIEIGIITYTINILVTVIFFCVHQMLNIRDMSICTGVQEPLSIVLPVESDRAGCPSFPHIWQPRWLAAPAPRVDGNTPRLLPRDRPPRPLVVTKALAGAASTRGAVCSVILLSVVSRRASRVGYVIGVSVYHVPEQRSVISYVGYVIGVSMDPSTYPIKSRLLRIGRI