Information report for MDP0000178901
Gene Details
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Functional Annotation
- Refseq: XP_008364966.1 — transcription factor TFIIIB component B’’ homolog isoform X1
- Refseq: XP_008364967.1 — transcription factor TFIIIB component B’’ homolog isoform X1
- Refseq: XP_008364968.1 — transcription factor TFIIIB component B’’ homolog isoform X1
- TrEMBL: A0A498IZ32 — A0A498IZ32_MALDO; Uncharacterized protein
- STRING: XP_008364966.1 — (Malus domestica)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g005589m
- Fragaria vesca: mrna21830.1-v1.0-hybrid, mrna21829.1-v1.0-hybrid
- Manihot esculenta: Manes.11G084700.5.p, Manes.11G084700.6.p, Manes.11G084700.8.p, Manes.11G084700.7.p
- Prunus persica: Prupe.8G091800.1.p, Prupe.8G091800.8.p, Prupe.8G091800.6.p, Prupe.8G091800.3.p, Prupe.8G091800.9.p, Prupe.8G091800.7.p, Prupe.8G091800.5.p, Prupe.8G091800.4.p, Prupe.8G091800.2.p
- Pyrus bretschneideri: Pbr012440.2
- Vitis vinifera: GSVIVT01023816001
- Ziziphus jujuba: XP_015892528.1, XP_015892526.1
Sequences
CDS Sequence:
- >MDP0000178901|Malus_domestica|MYB_related|MDP0000178901
ATGAGAAACGAGTTAAGGTTTGGTGCCCTAATTGAAGTTGTAGATGCATACACGTTGCTCGAACACAATWATCCGCATGAATACCCTCGAGCACAAAATTTAAAGTCTTGGCATAGTGAAATTACGCATTTGTCCAAGTTGGCCACGCGTCCATCATCGTCTGAACCTCTACTTCGACTGCAGCTCCTCGATTTTTCCATCCGTTTCCAGTTCTCTCTTTCGCAAATCTCTGCTTCCCTTGCTCTCGACTTGCCTTCTGTCACTCTCAAACGCCGGTTTGTACTCGGCAAAGTCTGTGAAGGACCAATATCGGAGATTAGAGATTTTAATAGGTCCTGTAGGGACAAAGGCTCATTTCTCAAAAAAGAGATAATAAATAAAAGTGGCAGACTACGTGCAGTTGGCACAATACCGAGCGTCAGACCCGTACCCGTCCCCTCCCTCTCCTGTCTCCTTGGGCGAACAGTGTCGCACCTCTGCTCTTCAAATTTACGGCGCCGTGCGGCCACTGGCGAGGTCGCCACCGACTTGGTTCTCCTCCTCGTCGGCCGGCCTTCAAAGGGCAGGTCACCCGCCACCCAGTTGAGCAGATCGAAATCAGGAAGTCTCACACCACCGCCGGTTTCGAGCCCTTTTCCGGACCCTAGCTCCGGACCGTTTCACTCTCTTTCCTTCTCTCTACTCCGCACTGTGTGTGAGCAGATCGTTTTTCAAATTCTCCCTTTCTTCGATTCGATCGTCAAATGTGCTCTGTTGCGATCGTCGTCGACTTTCTCTCTCAGTGGAATCTCTGCTCTTCGCTCTTCCAAGCTCAGTTCGCTGTATTATTGCGAGTCTTATTCTGATGCGTTTTCTTCCCTTACCTTATTTAAAGACAAGGCTTCTGCTATAATCGAAATGTCGGATTGGGACGATGTTTTTCTTGCGCCTGCTGGTGTCCCTGCTCGTGCTGGTGGCCGATTTCGACCCAAGGCAAAGCCACGGCCTAGCAGGGTAGCATCTACAGCAGCCGCCCCTGCTCTTCCGATTGTCATAACAGAAATACATGTAACATTATCTACCACTGTCTCAGATAGTGTTCCATCTGTTGATGTTGGAGACAGTAAACTAACAGATCAAGTTGGGAGCATAGAGCCATCAGAAAACAATGAGATTCCATTGTCTGATGGCAAGAAGGTCACTGGACCTTGCGAATCAACTGCAGACGTTGCAGGTTCTGATGGAAAAGCATCGGGGGAGAATGCAGACATATTCTCTGGATTGGAATGTCTTGATGATTCTATCAGTCAAACGACAAGGGGTACAGCAGAGTTTGCTGTCAATAAGTCTGGTGATAAGGCTAATACGGGTACCAAACCAGAAGCTGAAACTGGTTCTGATTATTGTACAACCCAAGATCCAATGTCCTGCAGAGAAGTTTCCGTTTCTAACAAACAGGGTGAAATAGAACCTGAGGTAGATGGGGCTTTCTCTGACTTTGAAGTTCTAGATGTTGGGTCTGATGTCGCCATTTCATCCGAACGACATGCTGGCAAACATCAACCCAAGCTCAAAGTGAAAAAAGGAAAGGAGAATATTCATATCCCTTGCTCTGAAGTTGAGCCTAACATGGGTTCACAAGCTGGACATTTGGTACATTTTGAAACTGGTGACATGAATGAGAGCTCGCTTCCTGCCTTCCCTACTAGACATGTCATTGATCACCCGTCTCCAAGGCTTGGTGATTCTAGTACCCTGAATCCAACCCCTGATTCCCAAGTGAATACAGAAAACCTGGCTGAAACTAACCACTCGGATGGTGCCATTTTGGGGGATGCTGTGCATTCAGAAGATGTTGGTGGAACACCTGAAAAAGTGGGTCGTAAGAGTAGAAATAGAAACACTTCTACTACATCAGATCTTCCTCAGAAGCGCAAATCTTCTGCAATCGAGAAGGCTGAAGGTGAGACATCATCCAGGCAGCTGAGGAAGCGGGTACCTCATAAACAAGTTGATGAGCTGGCAGACGAGGCTAATGATGACAGCTTCACTGCTGAACCTTCTAGTGATTCTAAGATCAATGAAGATGAGGATAATATTGATGAATATAGGGAGCATGAGACATCGCAGAGGAAAAGAGCCCCCAGAAAGTCCAAGAAACCAGTATCTGAAAAAGAACCAGTTCGAAAGCGTAAGAAGACCAAGGAAGCATCTGATCAGTCAACCAAAGACGCTTCCAAAAAGTTCTCCCATTCAACTCGTAGAAACAGAAGACAAGTGGACAAGTCTTTGCTTGAAATCCCAGAGGAGGAATTTGACCCCTATAAATTATCTCTCAAGGATCTCATTCGTCTAGCAGAGCATAAGGAGCTGTTAAAGATTAAGGAGGCAAGAAAATTGACAACTCGACAGCCCAATGAAAGTACGAACAGTGATTCTCACAAGGAAGGTTCTCACAATGAAGAGTTCTATCCTTCAGAACATGGCACTGATGAAAACCAAGCAACTTATCATGTTAATTCCTCTCTCCTCAATTACCAAACTTACATGGACAAAGCACCCACTGCAAGATGGTCTAAGCAGGACACAGAACTGTTCTATGAGGCTATTCAGCAGTGTGGATCAGATTTTACTATGATTCAAGAACTTTATTTTCCTGGTCGAACGCGTCATCAAGTCAAGTTAAAATTCAAGAAGGAAGAGCGTCAACATCCATTACGCATCTCAGAAGCCGTACTAAGTCGCTCGACTCATTCCACAGATCATTCGCAATTTACTTCATATATTGAGAAGCTGCAACAAGCTGCTCAGGCAAACAAGGAATCTAATGCAGATGAGTCAGTTGACATGACAAGCAAGGAGGAAGGACTAAGAGAGCAGACTCGGGATACCGATGAGCGAATGGAGAAACCCGAGTCGGAAGAAGTTCAAGATCAGGAAGCTGATGTTGCTGAAGTTCAAGATCAAGAAGCTGTTGCTGCTGAAGTTAGCAATCCCTTGAAGTCCGATGAAATTGATGAAGAAGATTTTACATGGTCTGACTGA
Protein Sequence:
- >MDP0000178901|Malus_domestica|MYB_related|MDP0000178901
MRNELRFGALIEVVDAYTLLEHNXPHEYPRAQNLKSWHSEITHLSKLATRPSSSEPLLRLQLLDFSIRFQFSLSQISASLALDLPSVTLKRRFVLGKVCEGPISEIRDFNRSCRDKGSFLKKEIINKSGRLRAVGTIPSVRPVPVPSLSCLLGRTVSHLCSSNLRRRAATGEVATDLVLLLVGRPSKGRSPATQLSRSKSGSLTPPPVSSPFPDPSSGPFHSLSFSLLRTVCEQIVFQILPFFDSIVKCALLRSSSTFSLSGISALRSSKLSSLYYCESYSDAFSSLTLFKDKASAIIEMSDWDDVFLAPAGVPARAGGRFRPKAKPRPSRVASTAAAPALPIVITEIHVTLSTTVSDSVPSVDVGDSKLTDQVGSIEPSENNEIPLSDGKKVTGPCESTADVAGSDGKASGENADIFSGLECLDDSISQTTRGTAEFAVNKSGDKANTGTKPEAETGSDYCTTQDPMSCREVSVSNKQGEIEPEVDGAFSDFEVLDVGSDVAISSERHAGKHQPKLKVKKGKENIHIPCSEVEPNMGSQAGHLVHFETGDMNESSLPAFPTRHVIDHPSPRLGDSSTLNPTPDSQVNTENLAETNHSDGAILGDAVHSEDVGGTPEKVGRKSRNRNTSTTSDLPQKRKSSAIEKAEGETSSRQLRKRVPHKQVDELADEANDDSFTAEPSSDSKINEDEDNIDEYREHETSQRKRAPRKSKKPVSEKEPVRKRKKTKEASDQSTKDASKKFSHSTRRNRRQVDKSLLEIPEEEFDPYKLSLKDLIRLAEHKELLKIKEARKLTTRQPNESTNSDSHKEGSHNEEFYPSEHGTDENQATYHVNSSLLNYQTYMDKAPTARWSKQDTELFYEAIQQCGSDFTMIQELYFPGRTRHQVKLKFKKEERQHPLRISEAVLSRSTHSTDHSQFTSYIEKLQQAAQANKESNADESVDMTSKEEGLREQTRDTDERMEKPESEEVQDQEADVAEVQDQEAVAAEVSNPLKSDEIDEEDFTWSD