Information report for Manes.01G255100.1.p
Gene Details
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Functional Annotation
- Refseq: XP_021612808.1 — AT-rich interactive domain-containing protein 2
- Refseq: XP_021612816.1 — AT-rich interactive domain-containing protein 2
- TrEMBL: A0A2C9WP42 — A0A2C9WP42_MANES; Uncharacterized protein
- STRING: cassava4.1_003489m — (Manihot esculenta)
- GO:0010628 — Biological Process — positive regulation of gene expression
- GO:0016575 — Biological Process — histone deacetylation
- GO:0048235 — Biological Process — pollen sperm cell differentiation
- GO:0000118 — Cellular Component — histone deacetylase complex
- GO:0048555 — Cellular Component — generative cell nucleus
- GO:0048556 — Cellular Component — microsporocyte nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Manes.01G255100.1.p|Manihot_esculenta|MYB_related|Manes.01G255100.1.p
ATGGTTGCTGGTGATAAGTGCGCTTTAGATTGCTCAAAAACCCCACAAAAGAAGCTCCAGTCAAAAGGGTTTCTGGTCGGTCTTGACCTGTTTTTAGAAGTAGCCGGACTAGAAACTGAACCAGATGCCGAGCTTCGATGCCAGTTTGATAACTGTATAAACTTTTTCTGGAAAGAAATCTGTGCCCTGGATGCTGCATTCCCTCCAATGCTTGGAGATGGACAATCTGTGGATTTGTTTAAACTGTTTTTAGCTGTGAGACAGAAGGGTGGATATGATGCAGTTTCTCATAATTGTTTGTGGGATGTGGTGGCAGAAGAGTCTGGATTGAGCCTAAACCTTGCATCTTCTGTGAAATTGGTTTATGCCAAATATCTGGATGCATTGGAGAGATGGTTAGAGAGACCTGTTGATAGAAAGAGTTCAAAATCCAAATCGAGTAATATCACCAACTCAGAAACCAAATTGAGTGATAGTGGCCTGAATGTGGGTGAGGTTTCCATGGAGTTAGGGTCTGAGTTTAAGGCATTGTTCTCAGAGATAATGGATTGGAAATCTGAACTTAATGTGAGTGCTGAGGTGGATTCAAATGGGGACGATAAGTGCATTGTTGATGATGAAGAATCTGTGCACATAGACACTGGAAACAGTGTTATTGATTTTGTGGAAGTTGGTAAATTAGGCTATAGTGTGTCCAAGAGCCAAAAAAGTGATTCTTTTTTTGATGGGGACCATAAATGCAAAGATGTTCAGAAACATCTGGAATCCAATTTAACTAGTTTGAAGGGGTGTGACGAGGATGAGGTGAAGAGTACTGTGGTGGAAATTGATGGAAGAAAGAAAGAAGATAATGGTAATGAAAATGATGTCATGGTATCAGATTCAGATGCTGTTGAGGAATCCATTTCCAGCTATAAAAGGAAAAGGGAGTCCATGTATGGTGTACTGAACTGGATTACTGGGATTGCAAGGAATCCATGTGATCCAGTGGTCGTTCCGTTACCAGAGATGTCAAAGTGGGAGTCTTATGCGAATGAGGAATCATGGAAGCAGATTTTGTTGGTTCGGGAAGCATTATTTCTGAAAAGGGATGTTAATTCAGGTGCTGGATCTGTTTGCCAGAAAAATCGGAAGATGCACCCATGCATGTATGATGATCAAGTTGGATTTGCATACAATTTCAGAGAGAGAATCAATTGTAGTAGAAAGCTGCTACACAGAAAAACAGTGTTTCAGTCACAGGCTTGTTCACAGTTATCTTCCTCAACCACTGTTACTGGCTCAGACTCTTGCACAAAGGGGGTTTTTGATGGTGATTCCTCAAGTAAATATTCTGTGTTTGACCTTCCAGTCGAAAAGACAATTCCCTTGGGACCGGATTTTCAGGCAGAAGTACCAGAATGGACTGGTGTTGTTTCTGAAAGCAACTCAAAGTGGGCTGGGACACGGGTTTGGCCACCGAAAAAAGTAGATAACAGATTAGTTATTGAACAAGAGCCTATTGGTAAGGGAAGGAAAGATGCATGCGGGTGTGAAGTGCCAAAATCTGTAGAATGCGTCAGATTTCACAATGCTGAGAGAAGGTTGAGGGTGAAGCGTGAATTGGGTTTAGCTTTCAAACATTGGAGGTTTGATAAGATGGGCGAAGATGTTAGACTTTCATGGACAGAAGAAGAAGAGAGAAAATTTGAAGCTATAGTGCGGTTAAATCCTCCATCTCTTGACAAGTGTTTTTGGAATGATATATTCAAATTCTTTCCTACCAAGGGAAGGGGAGATCTGGTGAGCTACTACTTCAATGTATTTCTTTTGCAGCGCAGAGCACAGCAGAATAGGTCGACTCCAAATAACATTGATAGTGATGATGATGAATCGGAATGTGGACTAGTGACCAATGGTTCTGGGCGGGAAGCAGCACCCAAGTCACCAGGATCTCTGTTATATTCTGCAAAGAAGGCCCCCCGTAAAGGTGGTAGATAA
Protein Sequence:
- >Manes.01G255100.1.p|Manihot_esculenta|MYB_related|Manes.01G255100.1.p
MVAGDKCALDCSKTPQKKLQSKGFLVGLDLFLEVAGLETEPDAELRCQFDNCINFFWKEICALDAAFPPMLGDGQSVDLFKLFLAVRQKGGYDAVSHNCLWDVVAEESGLSLNLASSVKLVYAKYLDALERWLERPVDRKSSKSKSSNITNSETKLSDSGLNVGEVSMELGSEFKALFSEIMDWKSELNVSAEVDSNGDDKCIVDDEESVHIDTGNSVIDFVEVGKLGYSVSKSQKSDSFFDGDHKCKDVQKHLESNLTSLKGCDEDEVKSTVVEIDGRKKEDNGNENDVMVSDSDAVEESISSYKRKRESMYGVLNWITGIARNPCDPVVVPLPEMSKWESYANEESWKQILLVREALFLKRDVNSGAGSVCQKNRKMHPCMYDDQVGFAYNFRERINCSRKLLHRKTVFQSQACSQLSSSTTVTGSDSCTKGVFDGDSSSKYSVFDLPVEKTIPLGPDFQAEVPEWTGVVSESNSKWAGTRVWPPKKVDNRLVIEQEPIGKGRKDACGCEVPKSVECVRFHNAERRLRVKRELGLAFKHWRFDKMGEDVRLSWTEEEERKFEAIVRLNPPSLDKCFWNDIFKFFPTKGRGDLVSYYFNVFLLQRRAQQNRSTPNNIDSDDDESECGLVTNGSGREAAPKSPGSLLYSAKKAPRKGGR*