Information report for Lus10014653
Gene Details
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Functional Annotation
- Refseq: XP_012084745.1 — pentatricopeptide repeat-containing protein At5g15340, mitochondrial
- Swissprot: Q9LXE8 — PP386_ARATH; Pentatricopeptide repeat-containing protein At5g15340, mitochondrial
- TrEMBL: A0A067JT92 — A0A067JT92_JATCU; Uncharacterized protein
- STRING: Lus10014653 — (Linum usitatissimum)
- GO:0006334 — Biological Process — nucleosome assembly
- GO:0000786 — Cellular Component — nucleosome
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: CEY00_Acc05765
- Arabidopsis thaliana: AT2G29760, AT3G29230, AT3G22690
- Brassica napus: GSBRNA2T00142900001
- Brassica oleracea: Bol043016, Bo7g087390
- Citrullus lanatus: Cla97C05G082080, Cla97C09G165370
- Juglans regia: Jr01_03100
- Nicotiana attenuata: A4A49_07003
- Oryza sativa: OsPPR16
Sequences
CDS Sequence:
- >Lus10014653|Linum_usitatissimum|MYB_related|Lus10014653
ATGGGTGCGCCCAAACAGAAGTGGACAGCAGATGAAGAAGCAGCACTTAAAGCAGGAGTGATTAAGCATGGTGCTGGGAAATGGCGAACAATACTTAAGGATCCTGAATATAGTGGTATCTTATACTTACGATCGAATGTGGATCTCAAGGACAAATGGAGAAATATGAGTGTTATGGCTCATGGATGGACCTCTAGGGAGAAGTCTAAGTTGGTCACTAAAAGGGTTCACAATGTACTAAAACAGGAAGAGAGTCCTGTGACCACTGGTAATAATGTTAAAAGTGATGAAGATGTTGTGGATATCAGGCCTCCTGAAGCTGCTGTCCCTTTGATGCAAATCCCTGCTCCTATAAGATCTGCCATACGTTCTGCACTCTACAGAGGTTCCATGTTTGGTAGATCTCCTCCTATGAAATGCGTCAGTCAGCTCTTTCCCCCAAGCCATCTGCGCTCTCTTCTTCGGTCATGTGCACGCCAATCGTCTCTCTCTGCTGGGAAGCAGCTTCATGCAGTAATCCTTACTTCCGGCCTACGTGGGTCCTCAAATTCATTCCTTATGAACGCCCTTCTTCACTTGTACTCGTCTTGTGGAGTTCTCAATTATGCCCGCCGTTTGTTCAATCAAATTCCGCACTCTCACAAAGACACTGCAGATTGGACTTCTCTCTTGAGTTGTCTTTCACAAAACGAAAAAAATCCTTTTGAAAGCTATTCATTGTTCGGTGAAATGCGGAGAAAGAATGTTATTGTTGATGATGTTGTGCTGCTTTGCATGCTTGGTTTGTGTGCTCGGGTGGGAGATTTCAAGATGGGAACTCAATTGCATGGATGTATGGTGAAGATGGGTTTCAGGCACAGTGTTAAGACTTGTAATGCGATGATGAATATGCATGTGAAATGTGGATTACTTGTGGACGCAAGGAGAATTTTTTGTGAAATGAATGAACCTAATGTGGTGTCGTGGAGTATACTGTTGGAAGGGGTGATAAAGTGGGAAGGGGTACAAAAGGGGATGGAGTTGTTTGATGCAATGCCTGAGAGGAATGAAGTTGGATGGACTATAATGATTGCAGGTTGTGTTGAGAGTGGGTTTATCAAGCAAGGGTATAAGCTTTTGAATGAAATGGTTTTTTTGTCAAGCTTTAGGTTGAATTATGTTTCCCTATGTTCTATTTTATCAGCTTCCGCACAATCCGGTGATGTAGCAATTGGGAGGTGGGTTCATGTTTTTGCTTTGAAGGAAGGGGATTTAAATTTCATGGTTGGGACAGCTTTGGTGGACATGTATGCTAAATGTGGTCGAATAAAAATGGCAATAAAAGTGTTTGATAATTTACCTAGGAGGAATGTAGTGACATGGAATGCGATGCTTGGTGGTTTAGCCATGCATGGGAAGGGAAACACCGTGTTGGAGTTGTTCAATAAGATGTTCAAAGAAGTTTCACCTGATGATTTGACCTTTATTGCTGTGCTTAGTGCCTGTAGTCATGCTGGTTTGGTGGATCAAGGTCGGAAGTATTTTCTTAATCTTCAATCAGAGTATGGAATAATACCAAAAATAGATCACTATGCTTGTATGGTTGATTTGCTTGGACGAGCTGGTCATTTAGAGGAAGCTGAACTTTTAATAGGGAATATGCCGATGCCACCAAATGAGGTTGTCCTAGGATCTCTTCTGGGTTCTTGCAACACTCATGGGAAGTTGAAGCTTGGTGAGAAGATTCTACAAGATCTGGCTGAGATGGATCCACATAACACTGAGTACCATATATTACTATCCAATATCTATGCTTTATCAGGAAGGCTGAAACAAGCTAATTCTTTACGGGATGGCCTTGCTTCTAGGGGGATTAGGAAGATCCCTGGAATCAGCTCTATTCATGTAGGGGGGCATATTCATCAGTTTACTGCTGGTGATAAGTCACACGCTAGAACTTCAGAGATCTACCATACCCTGGATGGTATGGTAATTAGGTTGAGGCTTGCTGGTTATGTCCCACATACCGCCTCACAGGTTTTCTCAGGTAGCGATGGCAGTAATAACATAGAGGAGAAGGAGCAAGCACTTTTATTGCACAGTGAGAAGCTTGCATTCTGTTTTGGGCTCATAAGCACAAGGCCTGTCACTGTACAGAGAAGTGCCTTGCAATATGTGACAACTGAGTCCCACTCGAGCTCATCAAAGTTTAGTGAGGGCGGTGTGGAATGGAATCAGATATGGCTGGATAATCTTATAATGGAGGCTATTACCACGTTGATGGAGCCTGATGGTTCGAATAAGACTGCAATTGCTTCGTACATAGAGGAACAATATTGGCCACCTCAAGATTTCAAGAGGTTATTGTCAGAAAAACTTAAGCATCTGACTTCATGTGGTAAACTAATCAAGGTGAAACGGAAATACAGAATAGCAGCTACGCCATTTGCAAACAGGAAGAGGAGTGCTTGCATTTTACTGCAGGATGGAAGACCGAGGGCGTTTGAAACAGCTGTGCGGGAGGATTTGAAAATGCCTACAAAAGCACAAGTTGATGTGGAAGTATCCAAGATGAGAAGACTGAGTGCACAAGCGGCGGAAGCTGTGGCTGCCAGAGCAGTTGCGGAGGCAGATGCTGCTATAGCAGAAGCAGATGAGGCTGCAAGGGATGCAGAGGCTGCGGAAGCAGACGCCGAAGCTGCAGTGGCATATGCAGAAGCAGTTATGAAGACCACCAAGGGGAGGAACAATGCAAAGACGGTCCCTGCAAAACTTGGGATCAACTTGAGATTGATTGAAGGTCTAATAGACCGAAAAAGAACCGAATGGTGCAGTCCGGCAGTCTGCAGCGTTGCCGGATGTACAATGACAATTGTTGCAGGATGTACGACGATATTAATCGCTTGTCACAACAACCGTAGTGAAGATGGCATAACAACAAAGAGGAACACAACAACTGTTAAGTTTCATTCAAAACCCCCATTATGA
Protein Sequence:
- >Lus10014653|Linum_usitatissimum|MYB_related|Lus10014653
MGAPKQKWTADEEAALKAGVIKHGAGKWRTILKDPEYSGILYLRSNVDLKDKWRNMSVMAHGWTSREKSKLVTKRVHNVLKQEESPVTTGNNVKSDEDVVDIRPPEAAVPLMQIPAPIRSAIRSALYRGSMFGRSPPMKCVSQLFPPSHLRSLLRSCARQSSLSAGKQLHAVILTSGLRGSSNSFLMNALLHLYSSCGVLNYARRLFNQIPHSHKDTADWTSLLSCLSQNEKNPFESYSLFGEMRRKNVIVDDVVLLCMLGLCARVGDFKMGTQLHGCMVKMGFRHSVKTCNAMMNMHVKCGLLVDARRIFCEMNEPNVVSWSILLEGVIKWEGVQKGMELFDAMPERNEVGWTIMIAGCVESGFIKQGYKLLNEMVFLSSFRLNYVSLCSILSASAQSGDVAIGRWVHVFALKEGDLNFMVGTALVDMYAKCGRIKMAIKVFDNLPRRNVVTWNAMLGGLAMHGKGNTVLELFNKMFKEVSPDDLTFIAVLSACSHAGLVDQGRKYFLNLQSEYGIIPKIDHYACMVDLLGRAGHLEEAELLIGNMPMPPNEVVLGSLLGSCNTHGKLKLGEKILQDLAEMDPHNTEYHILLSNIYALSGRLKQANSLRDGLASRGIRKIPGISSIHVGGHIHQFTAGDKSHARTSEIYHTLDGMVIRLRLAGYVPHTASQVFSGSDGSNNIEEKEQALLLHSEKLAFCFGLISTRPVTVQRSALQYVTTESHSSSSKFSEGGVEWNQIWLDNLIMEAITTLMEPDGSNKTAIASYIEEQYWPPQDFKRLLSEKLKHLTSCGKLIKVKRKYRIAATPFANRKRSACILLQDGRPRAFETAVREDLKMPTKAQVDVEVSKMRRLSAQAAEAVAARAVAEADAAIAEADEAARDAEAAEADAEAAVAYAEAVMKTTKGRNNAKTVPAKLGINLRLIEGLIDRKRTEWCSPAVCSVAGCTMTIVAGCTTILIACHNNRSEDGITTKRNTTTVKFHSKPPL*