Information report for Lus10014653
Gene Details
|
|
Functional Annotation
- Refseq: XP_012084745.1 — pentatricopeptide repeat-containing protein At5g15340, mitochondrial
- Swissprot: Q9LXE8 — PP386_ARATH; Pentatricopeptide repeat-containing protein At5g15340, mitochondrial
- TrEMBL: A0A067JT92 — A0A067JT92_JATCU; Uncharacterized protein
- STRING: Lus10014653 — (Linum usitatissimum)
- GO:0006334 — Biological Process — nucleosome assembly
- GO:0000786 — Cellular Component — nucleosome
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Lus10014653|Linum_usitatissimum|MYB_related|Lus10014653
ATGGGTGCGCCCAAACAGAAGTGGACAGCAGATGAAGAAGCAGCACTTAAAGCAGGAGTGATTAAGCATGGTGCTGGGAAATGGCGAACAATACTTAAGGATCCTGAATATAGTGGTATCTTATACTTACGATCGAATGTGGATCTCAAGGACAAATGGAGAAATATGAGTGTTATGGCTCATGGATGGACCTCTAGGGAGAAGTCTAAGTTGGTCACTAAAAGGGTTCACAATGTACTAAAACAGGAAGAGAGTCCTGTGACCACTGGTAATAATGTTAAAAGTGATGAAGATGTTGTGGATATCAGGCCTCCTGAAGCTGCTGTCCCTTTGATGCAAATCCCTGCTCCTATAAGATCTGCCATACGTTCTGCACTCTACAGAGGTTCCATGTTTGGTAGATCTCCTCCTATGAAATGCGTCAGTCAGCTCTTTCCCCCAAGCCATCTGCGCTCTCTTCTTCGGTCATGTGCACGCCAATCGTCTCTCTCTGCTGGGAAGCAGCTTCATGCAGTAATCCTTACTTCCGGCCTACGTGGGTCCTCAAATTCATTCCTTATGAACGCCCTTCTTCACTTGTACTCGTCTTGTGGAGTTCTCAATTATGCCCGCCGTTTGTTCAATCAAATTCCGCACTCTCACAAAGACACTGCAGATTGGACTTCTCTCTTGAGTTGTCTTTCACAAAACGAAAAAAATCCTTTTGAAAGCTATTCATTGTTCGGTGAAATGCGGAGAAAGAATGTTATTGTTGATGATGTTGTGCTGCTTTGCATGCTTGGTTTGTGTGCTCGGGTGGGAGATTTCAAGATGGGAACTCAATTGCATGGATGTATGGTGAAGATGGGTTTCAGGCACAGTGTTAAGACTTGTAATGCGATGATGAATATGCATGTGAAATGTGGATTACTTGTGGACGCAAGGAGAATTTTTTGTGAAATGAATGAACCTAATGTGGTGTCGTGGAGTATACTGTTGGAAGGGGTGATAAAGTGGGAAGGGGTACAAAAGGGGATGGAGTTGTTTGATGCAATGCCTGAGAGGAATGAAGTTGGATGGACTATAATGATTGCAGGTTGTGTTGAGAGTGGGTTTATCAAGCAAGGGTATAAGCTTTTGAATGAAATGGTTTTTTTGTCAAGCTTTAGGTTGAATTATGTTTCCCTATGTTCTATTTTATCAGCTTCCGCACAATCCGGTGATGTAGCAATTGGGAGGTGGGTTCATGTTTTTGCTTTGAAGGAAGGGGATTTAAATTTCATGGTTGGGACAGCTTTGGTGGACATGTATGCTAAATGTGGTCGAATAAAAATGGCAATAAAAGTGTTTGATAATTTACCTAGGAGGAATGTAGTGACATGGAATGCGATGCTTGGTGGTTTAGCCATGCATGGGAAGGGAAACACCGTGTTGGAGTTGTTCAATAAGATGTTCAAAGAAGTTTCACCTGATGATTTGACCTTTATTGCTGTGCTTAGTGCCTGTAGTCATGCTGGTTTGGTGGATCAAGGTCGGAAGTATTTTCTTAATCTTCAATCAGAGTATGGAATAATACCAAAAATAGATCACTATGCTTGTATGGTTGATTTGCTTGGACGAGCTGGTCATTTAGAGGAAGCTGAACTTTTAATAGGGAATATGCCGATGCCACCAAATGAGGTTGTCCTAGGATCTCTTCTGGGTTCTTGCAACACTCATGGGAAGTTGAAGCTTGGTGAGAAGATTCTACAAGATCTGGCTGAGATGGATCCACATAACACTGAGTACCATATATTACTATCCAATATCTATGCTTTATCAGGAAGGCTGAAACAAGCTAATTCTTTACGGGATGGCCTTGCTTCTAGGGGGATTAGGAAGATCCCTGGAATCAGCTCTATTCATGTAGGGGGGCATATTCATCAGTTTACTGCTGGTGATAAGTCACACGCTAGAACTTCAGAGATCTACCATACCCTGGATGGTATGGTAATTAGGTTGAGGCTTGCTGGTTATGTCCCACATACCGCCTCACAGGTTTTCTCAGGTAGCGATGGCAGTAATAACATAGAGGAGAAGGAGCAAGCACTTTTATTGCACAGTGAGAAGCTTGCATTCTGTTTTGGGCTCATAAGCACAAGGCCTGTCACTGTACAGAGAAGTGCCTTGCAATATGTGACAACTGAGTCCCACTCGAGCTCATCAAAGTTTAGTGAGGGCGGTGTGGAATGGAATCAGATATGGCTGGATAATCTTATAATGGAGGCTATTACCACGTTGATGGAGCCTGATGGTTCGAATAAGACTGCAATTGCTTCGTACATAGAGGAACAATATTGGCCACCTCAAGATTTCAAGAGGTTATTGTCAGAAAAACTTAAGCATCTGACTTCATGTGGTAAACTAATCAAGGTGAAACGGAAATACAGAATAGCAGCTACGCCATTTGCAAACAGGAAGAGGAGTGCTTGCATTTTACTGCAGGATGGAAGACCGAGGGCGTTTGAAACAGCTGTGCGGGAGGATTTGAAAATGCCTACAAAAGCACAAGTTGATGTGGAAGTATCCAAGATGAGAAGACTGAGTGCACAAGCGGCGGAAGCTGTGGCTGCCAGAGCAGTTGCGGAGGCAGATGCTGCTATAGCAGAAGCAGATGAGGCTGCAAGGGATGCAGAGGCTGCGGAAGCAGACGCCGAAGCTGCAGTGGCATATGCAGAAGCAGTTATGAAGACCACCAAGGGGAGGAACAATGCAAAGACGGTCCCTGCAAAACTTGGGATCAACTTGAGATTGATTGAAGGTCTAATAGACCGAAAAAGAACCGAATGGTGCAGTCCGGCAGTCTGCAGCGTTGCCGGATGTACAATGACAATTGTTGCAGGATGTACGACGATATTAATCGCTTGTCACAACAACCGTAGTGAAGATGGCATAACAACAAAGAGGAACACAACAACTGTTAAGTTTCATTCAAAACCCCCATTATGA
Protein Sequence:
- >Lus10014653|Linum_usitatissimum|MYB_related|Lus10014653
MGAPKQKWTADEEAALKAGVIKHGAGKWRTILKDPEYSGILYLRSNVDLKDKWRNMSVMAHGWTSREKSKLVTKRVHNVLKQEESPVTTGNNVKSDEDVVDIRPPEAAVPLMQIPAPIRSAIRSALYRGSMFGRSPPMKCVSQLFPPSHLRSLLRSCARQSSLSAGKQLHAVILTSGLRGSSNSFLMNALLHLYSSCGVLNYARRLFNQIPHSHKDTADWTSLLSCLSQNEKNPFESYSLFGEMRRKNVIVDDVVLLCMLGLCARVGDFKMGTQLHGCMVKMGFRHSVKTCNAMMNMHVKCGLLVDARRIFCEMNEPNVVSWSILLEGVIKWEGVQKGMELFDAMPERNEVGWTIMIAGCVESGFIKQGYKLLNEMVFLSSFRLNYVSLCSILSASAQSGDVAIGRWVHVFALKEGDLNFMVGTALVDMYAKCGRIKMAIKVFDNLPRRNVVTWNAMLGGLAMHGKGNTVLELFNKMFKEVSPDDLTFIAVLSACSHAGLVDQGRKYFLNLQSEYGIIPKIDHYACMVDLLGRAGHLEEAELLIGNMPMPPNEVVLGSLLGSCNTHGKLKLGEKILQDLAEMDPHNTEYHILLSNIYALSGRLKQANSLRDGLASRGIRKIPGISSIHVGGHIHQFTAGDKSHARTSEIYHTLDGMVIRLRLAGYVPHTASQVFSGSDGSNNIEEKEQALLLHSEKLAFCFGLISTRPVTVQRSALQYVTTESHSSSSKFSEGGVEWNQIWLDNLIMEAITTLMEPDGSNKTAIASYIEEQYWPPQDFKRLLSEKLKHLTSCGKLIKVKRKYRIAATPFANRKRSACILLQDGRPRAFETAVREDLKMPTKAQVDVEVSKMRRLSAQAAEAVAARAVAEADAAIAEADEAARDAEAAEADAEAAVAYAEAVMKTTKGRNNAKTVPAKLGINLRLIEGLIDRKRTEWCSPAVCSVAGCTMTIVAGCTTILIACHNNRSEDGITTKRNTTTVKFHSKPPL*