Information report for Lus10004489
Gene Details
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Functional Annotation
- Refseq: XP_015570603.1 — protein ALWAYS EARLY 2 isoform X5
- STRING: Lus10004489 — (Linum usitatissimum)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brassica napus: GSBRNA2T00119961001, GSBRNA2T00038579001
- Brassica rapa: XP_009147247.1
- Cucumis sativus: Cucsa.253300.4
- Malus domestica: MDP0000293437
- Manihot esculenta: Manes.09G168000.1.p
- Populus trichocarpa: Potri.013G020500.2, Potri.005G029000.1
- Prunus mume: XP_008246394.1, XP_008246395.1
- Ricinus communis: 30128.m008784
Sequences
CDS Sequence:
- >Lus10004489|Linum_usitatissimum|MYB_related|Lus10004489
ATGGTCGTCGATCCAATGCAACTTCTGGCTCTAAATCCCCCTTACAGGTTGAATGATGTTTACTACATCACGAAGCAGATAATCCCGGCCTTGCAAAGAGTGTTTGGACTTGTTGGTGCTGATCTAAACCGGTGGTTTTCCGAGATGCCTCGTCCCGCCAGGGGAAGTTTGGCCAAGCATCGCCCGCAGTTTGCTCCAAATCAATACAGGACGAGGATCGACTTTTACTACCTGTCTCAGCATTGCTTGATCTGTGGAGATTGTGAGAAGTGTTGGGAGAATGAAGCAGCTGTTGCTACGGCTATGATTGGAAGGACTTCCAAGAAGAGGAAATCTACGTATAAGTTGGGGCCACCTTGGAGTGACACTGAGATTCAGAAGTTCTACAAAGCCTATCGTAGACATGGGAAGGACTGGAAAAGGGTTGCTGCTGAAGTTGGTACTCGATCTGTGGAAATTGTGGAGGCCCTTTACAATTTACATCGGGCATACTTATCCCTACCTGAGGGGACAGCTTCAGTGCACGGCCTTATAGCAATGCTTTCGGATCATTATAGTGTTCATCAGGCGCCCAGGGGCAGGGAAGCAGAAGACAGTGGCATGCCACTTGTACCCCACAAATCTCTCAAACGCAAGAGAGTGAAAGTCTCGATGAGCGAGCCGGCAGACCGCTCTGTTTCAACATCAACAGATGGATGCCTGTCACTCTTAAAGAGAGTACGTTTACTTGGTGGTCAGCCTCGTGTAGTTGGGAAAAGGACACCCCGTTTTCCTGTTGGACATTCATCCACCAGAGACAATCAGAGGAATCATGGTTTCCAAAACCGGAAGTCGGACCTTGCTTCCAAGGAAGAACAGGTGCTTTCTCCGTTGTACAAAGACGTACTCTTTATACCCTTACTTTTTTTTATGCACTCTGGCTCATCTCGAGAAAAGCTTCGTGATGCTAGAAGTAAGGGCAGTAACAATCCTGCTGCCTATGATGGAGATGCAAGCTTGCGGGACGTTGATTGTGTTGACTTTGCCGATATTTGTAAAAAGGGAAAGAAGATTCTTGGGAAGAAAATGAAAGTTGGAGTGACGGAGCGTAAAAAGCTTGATGACAGTGAAGGTCAGTTCTGTGGCTTGAGCCAAAATGTTGACACAAAGGTTGTAAAAGGAAAGGTGAAAGTGACTTCTCCTAATGGCGAAAGCAGCAGCAAGAAACTTTTGTCTGGAGATGAATTCTCTGCTCTGGATGCGTTGCAAACATTGGCTCATCTCTCTGCGATGGAATCTGAATCTTCTGACCAGCTGAAGGAAGAAAAAACTATAGTTGGCGACGAAATAGCTTCAATTCCACAAACTACGTGTGTCAGCCATGGCACTACCGAAATCCCTCCCATGAAGGAAGCTCTACCCGACATGGTAACCAGAGTTCAAGCTACCACCTCAAAGAACTCAAAGACAGGAAGAATCACATCGGTTGATGCTAGACCTGATACAGAGGCCAAGCAGAGGAATGGACCGTCAAATGGTAATACCCTGAAGAGGAAACGCCAGTCTTCGGTATCAAGAGCATTGAAGGTTGAAGCTGAAACAAAAAGCCCTGTTACTGATTCAGTGACGACCAAGGATTTTCCTGAGGTAAAGTTGCCTGCTAAAGAGGAACAAACTAGTGAAGTGTCTGCTCCTTCCGGACAATTGAAGACATGTTTCGATAATAGTGATGATCAAACAAATGTAGTAAAAAGTCAAGCCAGTTCGCCATTGCCTTCAAGAACAAGTGAACGAAAAAGTAAAGCTAGAGTATCTAATCCAAAGGAAGAGTTTCCTTGTTTCCTTTCTCCTAAGCTTCGCAGATGGTCTAGATTTGAATGGTTTTGTAGTGCAATTGACTACCCTTGGTTTGCCAAACGAGAATTTGTTGAGTACTTGAATCACGTTGGGCTTGGCCACATTATTACTCTCACTCGCGTCGAATGGGGTGTCATAAGAAGTTCTCTGGGAAAACCTCGGAGGTTCTCCCAACATTTTCTTCAGGATGAAAGAGGGAAACTTCAGCAGTACCGCGAGTCCGTGAGGAAACATTACAGTGAGCTCCGTACCGGCATCAGAAAGGGACTTCCGACAGATTTAGCAAGGCCTTTGTATGTCGGGCAACGTGTCAATGCTATTCATCCGCAGAGTAGAGAACTCTATACTGGGAGAGTCCTTACCGTTGATCATGACGAATGCAGAGTGCAGTTTGACCATCCGAACATTGGAGTTGAACTCGTTAAGGATATAGACTGCATGCCTTTTGATCAAATGGAGAACATGCCTGAGGCTCTTAAGAAGCTGAAGCACTTTGATGTTTCAAAGGATGTTCAAATCAATAGACATCCGGATACTCGAAGGCTCGCCTCAGGTACTGGACCGAGTCCAGGAAACGCCAGATTAAACCAGGCTCAGGTCGTCTGTTCAGAAGCATTGAATACGAGGCAATGCCATACCCAGCCAGCAAACCAGGGACTACATTGGTTGAACTTGGGCAACTCCAGTTTATTTGCGGCCATGGAAGACACTCCGTACCAGGGTTCCTTTGCTTCACAAGAGTTGGGATCTGCTGTAGTTGAAATCGTACAAAAATCGAGACAACAAGCACATAAGATGGTTGATGCTGCTCTCCAGGCATTGTCATCTGAGAAAGAAGGGGCATCTCAAGGGGCAGATGCTTTCGCAACAATCATGGAGGCCCTAGATGGTGTGGACACAACAACTCGAGGTTTACCAGAGCCTCGGCAGCAAGTCACTGATGGCAACGATTCGGCAGAGTCCCACTCGAACTCCTCTGCAGCTTCATCTTCCCCGTCTGAGCTTATGACTTCATGTGTTGCTACTTTTCTCATGATCAAGATGTTTACCGAGCGGCAGTATCCTCCTTCGGATGTGGCTCAGATGATAGATTCTGCGGTGACCAACTTGCGACCTTCATGCTCCCAGAATCTGCCGATATATCGAGAGATACAGACGTGCATGGGGAGAATCAAGACTCAGATATTAGCATTGGTACCGACATGA
Protein Sequence:
- >Lus10004489|Linum_usitatissimum|MYB_related|Lus10004489
MVVDPMQLLALNPPYRLNDVYYITKQIIPALQRVFGLVGADLNRWFSEMPRPARGSLAKHRPQFAPNQYRTRIDFYYLSQHCLICGDCEKCWENEAAVATAMIGRTSKKRKSTYKLGPPWSDTEIQKFYKAYRRHGKDWKRVAAEVGTRSVEIVEALYNLHRAYLSLPEGTASVHGLIAMLSDHYSVHQAPRGREAEDSGMPLVPHKSLKRKRVKVSMSEPADRSVSTSTDGCLSLLKRVRLLGGQPRVVGKRTPRFPVGHSSTRDNQRNHGFQNRKSDLASKEEQVLSPLYKDVLFIPLLFFMHSGSSREKLRDARSKGSNNPAAYDGDASLRDVDCVDFADICKKGKKILGKKMKVGVTERKKLDDSEGQFCGLSQNVDTKVVKGKVKVTSPNGESSSKKLLSGDEFSALDALQTLAHLSAMESESSDQLKEEKTIVGDEIASIPQTTCVSHGTTEIPPMKEALPDMVTRVQATTSKNSKTGRITSVDARPDTEAKQRNGPSNGNTLKRKRQSSVSRALKVEAETKSPVTDSVTTKDFPEVKLPAKEEQTSEVSAPSGQLKTCFDNSDDQTNVVKSQASSPLPSRTSERKSKARVSNPKEEFPCFLSPKLRRWSRFEWFCSAIDYPWFAKREFVEYLNHVGLGHIITLTRVEWGVIRSSLGKPRRFSQHFLQDERGKLQQYRESVRKHYSELRTGIRKGLPTDLARPLYVGQRVNAIHPQSRELYTGRVLTVDHDECRVQFDHPNIGVELVKDIDCMPFDQMENMPEALKKLKHFDVSKDVQINRHPDTRRLASGTGPSPGNARLNQAQVVCSEALNTRQCHTQPANQGLHWLNLGNSSLFAAMEDTPYQGSFASQELGSAVVEIVQKSRQQAHKMVDAALQALSSEKEGASQGADAFATIMEALDGVDTTTRGLPEPRQQVTDGNDSAESHSNSSAASSSPSELMTSCVATFLMIKMFTERQYPPSDVAQMIDSAVTNLRPSCSQNLPIYREIQTCMGRIKTQILALVPT*