Information report for Lus10002879
Gene Details
|
|
Functional Annotation
- Refseq: XP_021634970.1 — protein ALWAYS EARLY 3 isoform X1
- TrEMBL: A0A067KV21 — A0A067KV21_JATCU; Uncharacterized protein
- STRING: Lus10002879 — (Linum usitatissimum)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Citrullus lanatus: Cla021725
- Citrus sinensis: orange1.1g001101m, orange1.1g001099m
- Cucumis sativus: Cucsa.253300.3, Cucsa.253300.1
- Gossypium arboreum: Cotton_A_04877_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D02G0520, Gh_A02G0465
- Manihot esculenta: Manes.15G014400.1.p, Manes.15G014400.2.p
- Populus trichocarpa: Potri.008G216600.1
- Prunus persica: Prupe.1G139300.6.p, Prupe.1G139300.1.p
- Ricinus communis: 29726.m004015
- Vitis vinifera: GSVIVT01017770001
Sequences
CDS Sequence:
- >Lus10002879|Linum_usitatissimum|MYB_related|Lus10002879
ATGGCTCCATCAAGAAAATCTAGAAGTGTGAATAAAAGGTTTTCCGGCATTGATGAGGTTGACACTAATGACGGTGCAGAATATGCCAACAAAAGTAGGCAGAAGAAACGCAAATGGACTGGCAAATTAGGTCCGAAATGGACAAAAGAAGAGCTTGAACGTTTCTACAAAGCATATCGCAAGCATGGTAAAGACTGGGAGAAGGCATACTTATCTCTTCCTAAAGGCTATGCTTCGGCAGCTGGACTGATTGCAATGATGACAGATCACTACTCTAATCAGGTGGATAGTGACAGTGAACAAGAAGTAAATGAGGGTCCCAGCACTTCCCACAAACCCCAGAAACGTGCACGGACGGCCAAAGGTTCAGCCGTGTCACCAGTTACAGATCTTTCAAAATCACTATCGGCTGCATCAAATTATGGCTGTTTGTCTTTGTTGAAGAGGAGGCGCTCAGAAAGCAGACCTTGGGCTGTAGGAAAACGGACTCCTCGAGTCCCAGTATCTTATTCTTATGACAAAGAAAAAGAAGAGAGATATATTTCACCAATGCGGCAGGGTCTAAAGTTGAAGGGCGGGGCATTTGATGATAATAACGATGATGATGGCGATGATGATGTTGCCCATAGGCTTGCATTAGCACTGACAGTGGCTTCACAAAGAGGGCCCACTCCGCAAGTTTCTCAAACATTGACTAGGAAAAAAGGTTCATCCTCATCGGCCCAAAATGGTGAACAAATGCATGCTGATTCAGAGATGACGAGTGCAAAGCTGCGCTGTAGTGAAATGGATGACAGCGGTTGTGAACTAAGTCTAGGAAGTACAGAAGCAGACACTGGAGATTATACAAGGGATAAAAGGTTCTTGAAAGGAAAGATGTACCAGAGATGGAGATCAGAACAAGAAGAAAGTATGGACAATCATTTGGATGAGATAAAGGAAGCCTGTAGTGGAACTGAGGAAGGGCAGAAGCCCGCTGGTAAAGGAAGATTCGATGCTGAAGTTACTAATGCAAAACTGCAGAGATCCTCCTATGATAAGGTTCCGAAGAAGAGAAGCAAGAAGGTCCTTTTTGGAGAAGGTGAAGATATTGCCTTGGATGCGTTGCAAACACTAGCTGATTTGTCCTTGAGACTGCCAGAGGGTGATACTGAGTCATCTGTGCATGTTCAGGAAGGAAAAACTGTAAATGTAGCCAAGTCTAAGCTGAAAGGGAATTCTCCAGCTTCTGGAATTAAAGTCACTCCGTCCAAGTCAAATAAACAAGCAAAATCTACACAAAATGTCATTGCTTTACCTGAATTAGAGGGAAGCAATCAGGTTAATGCCGGGCCTCGGAAAAGGAGGAACAAGCCCCTACAATCAAAAACGTCAGAAAAGGAACAACACAGTGGTCCTCACTTGGGTGAATCACAGAAAGTTAAGGTTGTTGATGATGTAAATACCTCTATCGATGATGCCAAACCCTCTCACAATGCTACATCTGGAAAGCAAAAGAGATCAACAAAACTTCCAGAGCGTACTTCCTCAAATGCTGATCCTGGAAGAGAGTCACATGATTCAGGTCCATCAGCAGCTCAAGCAGTATCTTCAAACCAGGTCATTCTTCCTACTAAAGTGCGGAGTCGCCGCAAGATAAGCACACCAAAAACACTTCTTGAGAAAGATACAAAGACTTGCGAGAACATTACACATGTTCAATCCAAAATTTCAACACCTTCATTTCCGGACCGACCTCTTCCTGCTAAGGAAAAGCTTAGCAATTGCCTCTCTAGTCGCAGACTAAGGCAATTTTCTCTTGGTAAGCCTCGGAGATTTTCCAGACAATTTTTGAAGGAAGAGAAAAAGAAGCTTTATCAATATCGGGAGTCCGTTAGGGAACATTATACTGAACTTCGTGCTGGTACTAGGGAAGGACTTCCAACGGATCTGGCTCGACCTGTATCAGTTGGGCAACGCGTTATTGCACTTCATCCACGGACAAGAGAAATCCATGATGGGAGTGTGCTAACTGTTGATCATAATAGGTGCTGTGTTCGATTTGACCAACCTGAGCTCGGGTTCGAATTTGTCATGGACATTGATTGCATGCCATTAAATCCAGAGGAAAATTTGCCTGCATCTCTTACCAGGCATGGTCTTGGTATCAAGAAGTATATGGAGAACTTGAACGAGTGCAAAACAAGTGCGTTACAGGCTGAAAACGCGATGGAAGGGTACATAAAGTTTCACCAAGAGAACCTGGATGCCACCAATGGTTTCTCCCATATTCCTCCCCCAAATTTTCATACCCTGCGGCAATCACAGGGTCTCTCCCTAGGTCTAGCTACGCCAGTTATTACTGGATTTGGTGAAACCATCAATACCCAAGCAGCAAACGCTCAGCCTTCCATTCATACACATAACCAAGCAAAGGAAGCTGATATTCAAGCATTATCTGAACTAACTCGAGCTCTTGAAAAGAAGATACCTAGGAACTCTTTAAGGTATTCTGCTGTTAGTACTCGAGAAAGAAAGCTGATGAGCTCTAAACTAAACGTGCAGGACGCTGTGGTATCTGAATTGAAGCGCCTGAATGAGGACGTGTTGGAAAGTCAAAACAATGGAGAAAAAAATAATCTGAGAGATTCAGAATCTTTCAAGAAGCACTATGCTGCGCTTTCATCTGCACTTTCTAGCTTGCGACAGCGAAACACATACCAAGTAATCACTCCAGCTATACCCATGATGACTACAGGCGACCCTATTTTGTACTACAGCTCTTTCAATCCTCATCCTACTGAAGAAGTCCAAGATTCCGGGTCTCATGTTGCTGAAATTGTCGAATCTTCCAGATCAAAGGCCCAAATAATGGTCGATGCAGCAATGCAGGCTGTGACATCTCTAAATAAGGAAGGAAGCAACATCGAGAGTATCGAGGAAGCCATAGATTTCGTGAATAATCAGCTTTCCATTGATGATTTAACCACGCAATCCTCCAGACCGCCTCATCCTGAGAATTCTACTCAGGGTGCTCTTGGAGGATCCCAAGATCAGTCAAGTTCTGGCACAGCAAATGTCGAGGCCAATCACATGTCAGATACCAAGTCGTCGAAATACTTATCTGACTTGAACGAAGCGCAAATTCCTTCAGATCTAATATCGCAATCTGTAGCCACCTTGCTCATGATTCAGAAATGTACAGAGCGACAGTTTCCCCCGAGTGACATAGCTCAAGTGTTGGACTCAGCGGTGGCGAATTTGAAGCCATCGTGCTCGCAGAATCTCCCGGTTTATGCTGACATACAGAAATGCATGGGGATCATACGGAACCAAATATTGGCGCTCATTCCCACGTAA
Protein Sequence:
- >Lus10002879|Linum_usitatissimum|MYB_related|Lus10002879
MAPSRKSRSVNKRFSGIDEVDTNDGAEYANKSRQKKRKWTGKLGPKWTKEELERFYKAYRKHGKDWEKAYLSLPKGYASAAGLIAMMTDHYSNQVDSDSEQEVNEGPSTSHKPQKRARTAKGSAVSPVTDLSKSLSAASNYGCLSLLKRRRSESRPWAVGKRTPRVPVSYSYDKEKEERYISPMRQGLKLKGGAFDDNNDDDGDDDVAHRLALALTVASQRGPTPQVSQTLTRKKGSSSSAQNGEQMHADSEMTSAKLRCSEMDDSGCELSLGSTEADTGDYTRDKRFLKGKMYQRWRSEQEESMDNHLDEIKEACSGTEEGQKPAGKGRFDAEVTNAKLQRSSYDKVPKKRSKKVLFGEGEDIALDALQTLADLSLRLPEGDTESSVHVQEGKTVNVAKSKLKGNSPASGIKVTPSKSNKQAKSTQNVIALPELEGSNQVNAGPRKRRNKPLQSKTSEKEQHSGPHLGESQKVKVVDDVNTSIDDAKPSHNATSGKQKRSTKLPERTSSNADPGRESHDSGPSAAQAVSSNQVILPTKVRSRRKISTPKTLLEKDTKTCENITHVQSKISTPSFPDRPLPAKEKLSNCLSSRRLRQFSLGKPRRFSRQFLKEEKKKLYQYRESVREHYTELRAGTREGLPTDLARPVSVGQRVIALHPRTREIHDGSVLTVDHNRCCVRFDQPELGFEFVMDIDCMPLNPEENLPASLTRHGLGIKKYMENLNECKTSALQAENAMEGYIKFHQENLDATNGFSHIPPPNFHTLRQSQGLSLGLATPVITGFGETINTQAANAQPSIHTHNQAKEADIQALSELTRALEKKIPRNSLRYSAVSTRERKLMSSKLNVQDAVVSELKRLNEDVLESQNNGEKNNLRDSESFKKHYAALSSALSSLRQRNTYQVITPAIPMMTTGDPILYYSSFNPHPTEEVQDSGSHVAEIVESSRSKAQIMVDAAMQAVTSLNKEGSNIESIEEAIDFVNNQLSIDDLTTQSSRPPHPENSTQGALGGSQDQSSSGTANVEANHMSDTKSSKYLSDLNEAQIPSDLISQSVATLLMIQKCTERQFPPSDIAQVLDSAVANLKPSCSQNLPVYADIQKCMGIIRNQILALIPT*