Information report for LOC_Os05g03550.1
Gene Details
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Functional Annotation
- Refseq: XP_015639126.1 — uncharacterized protein LOC9268524
- Refseq: XP_015639127.1 — uncharacterized protein LOC9268524
- Refseq: XP_015639128.1 — uncharacterized protein LOC9268524
- Refseq: XP_015639129.1 — uncharacterized protein LOC9268524
- TrEMBL: B9FGL5 — B9FGL5_ORYSJ; Uncharacterized protein
- STRING: ORUFI05G01980.4 — (Oryza rufipogon)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi2g38160.1.p
- Panicum virgatum: Pavir.7NG164300.1.p
- Triticum aestivum: Traes_1DS_300AB5CC9.2
- Zea mays: GRMZM2G447745_P01, GRMZM2G089406_P01
Sequences
CDS Sequence:
- >LOC_Os05g03550.1|Oryza_sativa_subsp._japonica|MYB_related|LOC_Os05g03550.1
ATGGCCGCAGGCACGACGGCGACCCCCTCCCACCGCCAGCCCCCACGCCGCCGAGACGGCTATTACCGACAGGGCGGCGGCTCCTACGACCGCTCCTACCCCGATGAATCGCTCGGCTACACGCCGTCGCGCTCAGACCGGTACTGGCTGGACGACGACGGTGGCGGCGGCGGCTATAAGGGTTTCAGCCGGTACGGTGGTGGTGGTGGTGGTGGCAGCCGGAGGGACGGCCGTGACATGCGGGGTTCCTACCGGAGGTCGCCCTTTAGGGGATACGGGAGCGACTTCTCCAGAAACCACCAAGAACACCCGCCTCCGCCACTGAGGAGGTCGCCCCTGAGATCAGTTGCTGTACCGATGTCTTATGACCCTCCTGGTGATAGGGCTGATAGGGGGGATAGAGACCATCATCACCGTGTGACTCCTTGGCGGCCGCTGCGCCGGAGGGAGAGCAGATCTGATGCTGCAGACGCTGCTGGGGCTGGACCTGTGCCTGTTGGACAGGCCGCTGCAGCAGCGGCCTCAGAGAAGGACGTTTCAGCTCGGTCCTCAGCCGTCGCGGCTCCTCAGGTCTCTGAGGAGGAGGCACCAAGGAAGAAGCCTCGGCTTGGATGGGGGCAAGGTTTGGCCAAGTATGAGAAGCAGAAGGTGCAAGGACCTGCAGAGTCTGCTGAAGCTGTTGCCGAAGGCAGCCCAACTGCCACCGAACAAAAGGGAATCACCCATACACCAGCACCTGCGCCTTGTGTGTCCCCAGTGGCGGCACCATCACCCACGCCTTGTGCGTCCCCAGTGGCGGCACCATCACCCGCGCCTTGTGTGTCCCCAGTGGCGGCACCATCACCTGCACCGCCATGTAAATCACCAGTCCCTGAAGATAAATCCTGTGAACTGACAGCAAATACAGTCACTGAATCCAATAAAAATATCCCAGGACCTGACGTTCAGGCTTGCAATAACGAAGTCCCCACTAAGTTAGATCAGCTTGAGGGTGATCCCATTGATTCGCTTGCAAAGGTCCTTTCTGAACTGGTGCAACATGAAGATTCCTGTTCTGGGGATTCGAAAAGACTGTCCAATGTCAGTAAGTTATTGTTACTGAAGGAAAGCATTAGCAAAGAGCTCGAAAAGACAGAACTTGAGATTGACTCCTTGGAAGGTGAACTTAAATCTGTTAATGTGGAAGCCAGAAATAGAACACTCAAAGATCCACCTACAGCTGTAACTTATGCACAAAATCCTTCACCTTCACCTGTGAAAGAACAAGGAGAGCTGACCCCTTCTCCCAAGATTTCTATGGAGCAGGATGCTGATGTAAAAGGCTCAGAGCTCATGGAAATAGAGACAGCTCAAGCTCATAATGCAAAAGCAGTTTCTTCAGAAGAGAGTGTTGCTTGTCCTGGAGTTGCTCTGGGTCAGGTCCCTGCCGCTGCTGATGTTATCCCATCTGATCCATGTGGGAAAACTGGTTCTGGAATTGATGTCGATATTGAGCAGCGCGAAGAGAATCCATGCCAAGAAACTTTTAATGCCATGAAAGCAGATGGAAGCAGTGACTTGGCCACAAGGCCTTGCTCTTATCGTGAAGTTAAATATAACTTAATGGATCAAATTATTGCTGCGAACAGGAGTGAAGCCAAAAAAAATTCTCAATTACTATTTAAGCCTGTGCCAGCTGATCGGTCCAATCTTGATTTATTGGCATCAAGCTATCTTTCTAGCCAAATGAAGAATGATGTAATTATCAAGAAGAAGCATGCCATACTTAAAAATCGACAAAGATTCAAAGAGCAGATTCTTACCTTCAAGTTCAGGGTGCTGCGTCACCTCTGGAAGGAGGATGTGCGACTTCTTTCTGTAAGAAAGCAGCGCTCTAAGTCTCATAAGCGCACAGACCAGAGCAACCGATCATCACAGAGCGGATCTCAGAGGCAACGGTCCTCTAATCGCTCCAGATTGGCTGTACCAGCTGGTAATTTAAGCACATTTCCTATCACAGAAATGTCAGGTGTAGCAAGGAAGCTGTTTTCAGAATTTCAGCTCAAGCGTTGCAGAAATTACTTGAAAATGCCTGCACTGATTGTTGACGAAAAAGAGAAGGCAGGTGCTAAGTTTGTGAGCAAGAACGGTTTAGTTGAGGATCCTGTTTCAGTTGAGAAGGAGCGAGCTTTGATAAATCCATGGATTCAGGAGGAAAAGGAAATTTTTATGGAGAAACTTGCAACATTTGGTAAGGATTTCTCCAAAATATCCAGTTTCCTTCAGCACAAGACAACTGCTGATTGTATTGAGTTCTACTACAAGCACCATAAATCTGATAGTTTCCGAGAAGTTAAGAAACTTCTTGATCTTCGGCAGCAACAGCAACCTGCCAACAATTACCTAGGAGCAGTATCTGGAAAGAAATGGAATCCTGAGGCAAATGCGGCATCACTTGATATGCTTGGGGTGGCCACAGAGGTGGCAGCCCAAGGCCTTGAATATGTGAATGAAGTGAAGAAAAATTCTGCGAAATCTATCCTGAGGACTGTTTGTGGTGTTGATAATTCTACCAAAGGATCCGAGAAGGATTGTGTTGGGGATGTTTCTTTGCACGAGAGAGAATCTGTAGCTGCTGATGTCTTGGCAGGCATATGTGGAACTCTCTCCCCAGAAGGCATGGGCTCATGCATTACCAGTTCTGCTGATCCTGGCCAGAAGATAGGGATCATCTCAAGAATGGAGCATCTTTTAACTCCTGAAGCAGATAAAAACTTTGATGATGACGGCACTCTCTCAGATCAGGAGTGTGAAGTTGACATAGTTGATTGGAATGATGATGAGAAGTCAAGTTTTATTGAGGCTATGAATAGATATGGGAAGGATTTCGCTCGAATTTCGTCATACGTGAAGAGCAAGTCATTTGAACAATGCAAGGTTTTTTTCAGCAAGGCTCGGAAATCACTTGGTTTGGATCTGATCCATCAAGGTGCTGCTGATGCTGGTTTCCCTACAGGTGATGCCAATGGAGGAAGGAGTGGTACAGATGGAGCCTGTATTGCTGAGATGGATTCAGCTATCTGTAGTGCACAGTCATGTCCTAAAGTGGAGATAGATGCATGTCCTGTTTCTGATGGAGAAATTCAAGGACATAATCCTCTTTCTGATATTGCCTCTAGGCAGCCAGAAGCTGACAAATCAAACATGCCTGATGTTGTGGACATAAATGTCGAGGAAGGTGAAAGCAAAGCAGAAAAAGACTGCAGCATTCTTGTTGATCATAAACAGTTACGTGAAGACATTAATCAAACATCATGTGCTCGTATCGACATCAACTGTCCTGAGAGCACAGATAAGCTGCAAGACATAGAGGATGTAACACCAGTGAACATGCATGGAGATGATCTCATGGCCACTTCAGTTGAACAGGTTGCGGCAGCGCATGTGGAAAGTAGATCCAGTTTACATTCTGAAGGGATTGGCATTGATGTTTCCAGGATCGAAGGATGTTCACATGAGAGTACAATTGGTAAAGGTGGAAAATCAACACCGTCTGTTTGCTTGCCTGCAGAAAATGGGGTTAGTAAGGAAAATATCATCCACTTCTCGAACATGGATGGTGCTTCCTCCATTAGTCCTGCATTTACTTCAAATTATCAGCAAAGTAAGCTGGCAGATCCAATCCAATCAAAACCGAAGCCCCTTACCCCAAAGGATTTAATGCCTGTCCAATTTAGTTCGTCGCTGCCTGATCCTACCTCAATCTGTTTTGAGGGTATAGCTGCCATAACTACACCCAATTTTGAGGATCATGGCAACAGAGCCAGCATTGCTTCAGGGGCAAAAGATGTGAACATGTTCCCAACATTTAAAGACCAGTCCAGTAATCGTCATGATGCACTGTTTTCTAATGTCGATGGGTACATGCAACAGAGACGAAATAATCACTTTGGAACTGAAGTATGTGGCTTATCTGAAAGCACAGGCATTTCCCAGTCGGACCAGTTCACAGTATCGAAATTCCAGAATGGCAGGCCCAGCAGCTTGGGCCTTTCGAATGGAAATCTTGGGGTTCTATCGACTGGGAGAAGAGAGGAAGCACGTGAAGGCTTGTTTAGGCCTTGTTCTGTCAAGACAAGTGCTGGGAATGAGGAGCAGCAAAAGCGGCCTGGTGATGTCAAGTTGTTTGGGCAAATTCTTAGCCATCAATCATCCTTGCAAAGCTCTGGTTCATCAGTTCATGGAAGCAAAAGCAAGCCCCCCTCACCAAAGGTTGATAAGCCAGCTTCTTCTAGGTTGTTGAGTAATCCAAGGGAACGCCTGGTTTATTCTTCCAGGCCTCCAATCATTGCTAACTTGGGGCTAGAGGAGAGAGCGATGAGGAGTTTTGACCATATGGATGGGCGAACAATACAGCCTGAGCCTATGGTTATGGTGGCAAAGTGTCAGAGACCGTCAGCTGGTGTACCAGTTTACTCAACCAAAAATGGCGCGCTCAGCGTGTTTGCGGAATTTCAGCAACCTTCAATGCCGCCACATACATCAGATCACAAACTACTAGAAAACTTTGCCGATCTTCATAAGAGGAATGGAATCGAACTCCTTTCGGGGTTCCAGCAGCCTGGGAGGCTTGGGGGTGCTGGGGTCCTGGTTAGCGGTGTATCTGACCCTGTGGCTGCTCTCAAGGCACAGTACGGCTCTGGTTCGAAGATGTTGAGCAGCAGCAACGACGTGGATACATGGAAAGACATAGGAAGCAGGTAG
Protein Sequence:
- >LOC_Os05g03550.1|Oryza_sativa_subsp._japonica|MYB_related|LOC_Os05g03550.1
MAAGTTATPSHRQPPRRRDGYYRQGGGSYDRSYPDESLGYTPSRSDRYWLDDDGGGGGYKGFSRYGGGGGGGSRRDGRDMRGSYRRSPFRGYGSDFSRNHQEHPPPPLRRSPLRSVAVPMSYDPPGDRADRGDRDHHHRVTPWRPLRRRESRSDAADAAGAGPVPVGQAAAAAASEKDVSARSSAVAAPQVSEEEAPRKKPRLGWGQGLAKYEKQKVQGPAESAEAVAEGSPTATEQKGITHTPAPAPCVSPVAAPSPTPCASPVAAPSPAPCVSPVAAPSPAPPCKSPVPEDKSCELTANTVTESNKNIPGPDVQACNNEVPTKLDQLEGDPIDSLAKVLSELVQHEDSCSGDSKRLSNVSKLLLLKESISKELEKTELEIDSLEGELKSVNVEARNRTLKDPPTAVTYAQNPSPSPVKEQGELTPSPKISMEQDADVKGSELMEIETAQAHNAKAVSSEESVACPGVALGQVPAAADVIPSDPCGKTGSGIDVDIEQREENPCQETFNAMKADGSSDLATRPCSYREVKYNLMDQIIAANRSEAKKNSQLLFKPVPADRSNLDLLASSYLSSQMKNDVIIKKKHAILKNRQRFKEQILTFKFRVLRHLWKEDVRLLSVRKQRSKSHKRTDQSNRSSQSGSQRQRSSNRSRLAVPAGNLSTFPITEMSGVARKLFSEFQLKRCRNYLKMPALIVDEKEKAGAKFVSKNGLVEDPVSVEKERALINPWIQEEKEIFMEKLATFGKDFSKISSFLQHKTTADCIEFYYKHHKSDSFREVKKLLDLRQQQQPANNYLGAVSGKKWNPEANAASLDMLGVATEVAAQGLEYVNEVKKNSAKSILRTVCGVDNSTKGSEKDCVGDVSLHERESVAADVLAGICGTLSPEGMGSCITSSADPGQKIGIISRMEHLLTPEADKNFDDDGTLSDQECEVDIVDWNDDEKSSFIEAMNRYGKDFARISSYVKSKSFEQCKVFFSKARKSLGLDLIHQGAADAGFPTGDANGGRSGTDGACIAEMDSAICSAQSCPKVEIDACPVSDGEIQGHNPLSDIASRQPEADKSNMPDVVDINVEEGESKAEKDCSILVDHKQLREDINQTSCARIDINCPESTDKLQDIEDVTPVNMHGDDLMATSVEQVAAAHVESRSSLHSEGIGIDVSRIEGCSHESTIGKGGKSTPSVCLPAENGVSKENIIHFSNMDGASSISPAFTSNYQQSKLADPIQSKPKPLTPKDLMPVQFSSSLPDPTSICFEGIAAITTPNFEDHGNRASIASGAKDVNMFPTFKDQSSNRHDALFSNVDGYMQQRRNNHFGTEVCGLSESTGISQSDQFTVSKFQNGRPSSLGLSNGNLGVLSTGRREEAREGLFRPCSVKTSAGNEEQQKRPGDVKLFGQILSHQSSLQSSGSSVHGSKSKPPSPKVDKPASSRLLSNPRERLVYSSRPPIIANLGLEERAMRSFDHMDGRTIQPEPMVMVAKCQRPSAGVPVYSTKNGALSVFAEFQQPSMPPHTSDHKLLENFADLHKRNGIELLSGFQQPGRLGGAGVLVSGVSDPVAALKAQYGSGSKMLSSSNDVDTWKDIGSR*