Information report for LOC_Os01g09760.1
Gene Details
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Functional Annotation
- Refseq: XP_015619147.1 — protein ALWAYS EARLY 2 isoform X1
- TrEMBL: I1NL30 — I1NL30_ORYGL; Uncharacterized protein
- STRING: ORGLA01G0057000.1 — (Oryza glaberrima)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi2g05824.3.p, Bradi2g05824.2.p
- Hordeum vulgare: MLOC_36343.2
- Oryza sativa: OsALYL1
Sequences
CDS Sequence:
- >LOC_Os01g09760.1|Oryza_sativa_subsp._japonica|MYB_related|LOC_Os01g09760.1
ATGGGTCCAGCAAAAGGTTCTCGCACAATTACCAAGATCACAATAAAGGGGTATGACGATCGACAGCATGACGAGGATCCAAATAGTTCAAGCAAGGTTAAACTAAAAAAGAGAAAAATGTCAGATTTAGGTCCTCAATGGAGCAAGGATGAGCTTATGCGCTTTTATGAAGCCTACCGTCGACATGGAAAAAACTGGAAAAAGGTCAGTGCATCTGTGGGTGGAAAATCAGCAGATACAGTAGAAGCCCTTTACAGTGTGCACCGGACTTTCTTATCTCTTCCAGAACGTGAAGGTACTGCCATGGGATTTGTTGCATTGGTAACTGGTCATCACAATGTTTCGCAGGATGAATCCAAGAGTCATAAAGGAAGTGATCAAACAGTTAGAGCATCTGGGAAGGTACGGAAACGTGAAGCTACAGGGCAGAAAGAGAAGGAAGCACCTCATGCTCACCGCTCCTATCATGAAAGAAGAACTTCTGGATTATCTTCTTTCAAGAAAAGATACTATGGAGAACTTGTCAAGAACATTCCAAGACATCCTTCAGGGAAACGTACTCCTCGTGTACCAGTTATTTTTCCTGCAGACATGAATGTTGCTCATGCTGGCATACCAGAAACAGAAAATGCCATCAACTGTACCAAAAAGGCTAGTGGAGCTACCAATAATGAGCTTGAATGCTCATCTCATGGAAGTCCTGGAATCTCAGAATCAGCCAAGTTTGTTCAAGGCCAGACTTTCCTGGAAGCTAAAGGAACTGGAAGCTTGAAAAAGAGAAGAATTGAGCAGAGTATGGAACAAGGTCAGACAATTAAAGATGAGCATAAAACCGCAATGGTGGCTAAAGAAGGGAATGACCTTACTGAATATCAGAGACTTACCAATCTATTTTCCCCAGATGAGATGTTGGTCTTAGATGTCTTGGAGAGTTTAGTGACTGTACCCAGTAAAATATCAGAGCCTAAGATTAATATTCCTTCAGGTACACTTGGAAGGGATGATTCTGCATTGTCTCACAGAAGGGAGGAAGGTCCTTCAGTTAAGAGATCCAAACAAGGGAAGCAAGTTGGTGAATGCAGTGCCTCCAAGACAAGGAATAAAAGGAGAAAGAAGTTAATAGCTGAAGAGGTGCCTACTGAAGGAGTCACTTCTAATCATTTAGATTTGCCAGAAGAGCGTCAAGTTGATGCCACTGAGTGCGCCTTGAATTCTGATCTGGAAAGGGGAACAGTTGATTTACCTGAATCAACTGCAAATATTTCTACCAAAATCCCTGATTTGCCATCACAATTAAAACCTGAGATAAATATGTCGAGAAGGAGCAAAAGAAAATCCAAAAGTCCTTGTGGTTCTAAGTATGTCGTTTGCAATGGAGCAGATAATTTACAGGCTAGGAGATTGCAGCATTGCTTGTCATCTGAGTCACTTCGTAGATGGTGTACATATGAGTGGTTTTACAGCGCAGTTGATTATCCATGGTTTATGGATAATGAGTTTGTGAACTACTTGAATTTTGCGAATTTGAGCCATCTGTCAAGGCTCACTCGGTCCGAGTGGAGCACAATAAGGAGCTCACTTGGCAAACCCCGACGTTTTTCTGATCATTTTCTGGCAGCAGAAAAAGATAAACTTGAAAATTATCGCAAAAAAGTTAGGCAATACTATGCTCTACTAAGTGAAGATTCGTGGGATTCTCTACCACCAGACCTAGCTCGACCATTTTCAATTGGTCAGCAGGTAATCGTTCGTCACCCAAGTACGCGGGAACTTTGTGATGGTAAAGTGGTGATGATGGAACAGGATCGTTATAATGTCCAGTTTGATAGGCCTGACCTTGGTGTTGATGAAGTAAAGGACACTGATTGTATGCCTGTAAACTGGTTGGATAATCTGCCTGATGACCTCAAAAAGAGGAGCTTCCTTTCAAATAATTCACACAACAGAGTAGAGGTTGAGCAAATTCCAAAGTTTACTTCAAAAGAGAACTGGGATCATATCAGCGGAGAGGCCGAGCCATCCAAAACCATGCACATAACTTCAGATGAACAGGTTGAAATTGCTGTGGATATTGAAAGACTATCCAACAAGAGTACATCTGGTAATTGTGGACCATTACAGCCGCTCCAGTCTGTTGATGACAATGTACGGAGTAGAGGTTTGTCAGAGCACAGGAATGGTCACAATGATGAGCTAGATTCTTATATTACTTCCTTTGTCCAAATGTCATTGGCACAAGCCAAGCAGATGGTTGACGAAGCCATGAAGGAAATCTCTGAGAATGGTAAAAGTTCTCTAGAAGAAACAGGCATATCAAATGAAGCGACGGATTGTACAGGCCCAGAACCGGAATCTGCTGCTAATTCTGAACTTCCGCGCAACCTGATATTCAACTGCATTGCCACGCTTCTTGCAATCAAGCATTTTAGCGAGGGCCGACATCCACCTCCTAACATAGCAGGCGTCCTGGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAACCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGCTCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAA
Protein Sequence:
- >LOC_Os01g09760.1|Oryza_sativa_subsp._japonica|MYB_related|LOC_Os01g09760.1
MGPAKGSRTITKITIKGYDDRQHDEDPNSSSKVKLKKRKMSDLGPQWSKDELMRFYEAYRRHGKNWKKVSASVGGKSADTVEALYSVHRTFLSLPEREGTAMGFVALVTGHHNVSQDESKSHKGSDQTVRASGKVRKREATGQKEKEAPHAHRSYHERRTSGLSSFKKRYYGELVKNIPRHPSGKRTPRVPVIFPADMNVAHAGIPETENAINCTKKASGATNNELECSSHGSPGISESAKFVQGQTFLEAKGTGSLKKRRIEQSMEQGQTIKDEHKTAMVAKEGNDLTEYQRLTNLFSPDEMLVLDVLESLVTVPSKISEPKINIPSGTLGRDDSALSHRREEGPSVKRSKQGKQVGECSASKTRNKRRKKLIAEEVPTEGVTSNHLDLPEERQVDATECALNSDLERGTVDLPESTANISTKIPDLPSQLKPEINMSRRSKRKSKSPCGSKYVVCNGADNLQARRLQHCLSSESLRRWCTYEWFYSAVDYPWFMDNEFVNYLNFANLSHLSRLTRSEWSTIRSSLGKPRRFSDHFLAAEKDKLENYRKKVRQYYALLSEDSWDSLPPDLARPFSIGQQVIVRHPSTRELCDGKVVMMEQDRYNVQFDRPDLGVDEVKDTDCMPVNWLDNLPDDLKKRSFLSNNSHNRVEVEQIPKFTSKENWDHISGEAEPSKTMHITSDEQVEIAVDIERLSNKSTSGNCGPLQPLQSVDDNVRSRGLSEHRNGHNDELDSYITSFVQMSLAQAKQMVDEAMKEISENGKSSLEETGISNEATDCTGPEPESAANSELPRNLIFNCIATLLAIKHFSEGRHPPPNIAGVLERACLMLRPSCAENLPIYNEIENFIAVIKNQILALVPSASSNARLPMYM*