Information report for KN539456.1_FGP007
Gene Details
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Functional Annotation
- TrEMBL: A0A0E0JCD6 — A0A0E0JCD6_ORYNI; Uncharacterized protein
- STRING: ONIVA12G17610.1 — (Oryza nivara)
- GO:0006334 — Biological Process — nucleosome assembly
- GO:0000786 — Cellular Component — nucleosome
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: BRADI_4g01790v3
- Oryza sativa: LOC_Os12g41900
- Triticum aestivum: TraesCS5B02G046300
Sequences
CDS Sequence:
- >KN539456.1_FGP007|Oryza_longistaminata|MYB_related|KN539456.1_FGP007
ATGGGTGCCCCGAAGCAGAAATGGACCGCGGAGGAGGAGTCCGCCCTCAAGGCCGGGATCGCGAAGCACGGGGCTGGGAAATGGCGCACCATACTCAAAGACCCAGACTTCAGCAACGTCCTGCGCTACCGCTCCAATGTTGACCTCAAGGACAAATGGCGGAACATGAATGTAACCGTGAACGCGTCCGGTGCCCGCGACAGGGTGAAAGCGCCCGTCGTTAAGAAGCCAAGATCCGCTCCTAAGCATGAAGGCCACTCTACCTCTACAGCTATTGCCGCGGTAACTTCAGATGGTGATGATGATGTTGCGGAGCCTGTTCCTCTTGCAACGTCTACTTCATCCAAGAGATCCCTCTCGAGGCTAGACAATATCATAGTAGAGGCAGTAAGGAGCTTGAATGAGCCTACAGGGTCATACAAGACAGCCATAGCTAATTACATAGAGGAGCAATACTGGCCTCCTGCTGATTTTGATCATGTCCTGTCTTCAAAACTGAATGATCTGACAGCATCTGGGAAATTGATAAAGGTGAATCGAAAGTACAGGATAGCCCCTAGTTCATCTTTGTCAGAAGGGCGAAGCTCCAAAGTAGTGCTGCTCGAAGATATAAAAAAAGAACCAACAAAGTTAGATAGGGAAGATGTTGCAGTCCTCACTAAATCTCAAATCGATGCTGAATTAGCTCGGATGAGAACCATGACTGCAGAAGAGGCTGCTGCTGCTGCTGCTCGTGCAGTTGCAGAGGCAGAAGCTATCATGGCTGAAGCCGAAGCCGCAGTAAGAGAAGCAGAGGCTGCAGAAGCTGATGCTGTAGCTGCACAAGCTTTCGCGGAGGCAGCAATGGCAACATTTAAAAACAGAAGTTCAGCAAAATTGGTAATTGCTCTAAGTACCTCAGTTCTAGTTTCAAATGATCATTCGAGCTTGAAGCTACCTGTGGGAGCTGGTGCAGCATCAGTTTCCTCCGACCTTGTTCTCTTTCTCATGGATAATATGGTAATGCTGCAGCGTGATGTATTCAATCTTGTTTGGCTCCTGTTTAACTCAAAATCGTTGAAAGGACCGTGCATCCTACTTTTTGGGTGCAGAAGTAGTACTAGGATTGGTTCAGTTTGGTTTTTGTTTAGGTTTGTTGGGGGTGAATTAAGGAAAAAGAACACATTTTTATGGGGATTTGGGAGGATAGAAATGGAAGACATAAGTTCATTGAAGCTCCAGGATTTACTTATGTCGCATCTTGTTCACAAGTCAGATGCCTCAAGACTCATGCCTATGCTCACCTACATACTGATGACTGATGAATTGTACTGCACAACAGGGCTTCCCAGCGATGTTCTTGTTGAGGTTGGGGAGATGTCTTTCCACCTTCACAAGATGCATGAAGCAATATGTACAACTTTGCTTGTGATAATGGAGAATTTTGAAGAAATGAGCTTTAATGAACAACCACAACTTACTTTTTGCACCCCCAGTTACTCAAGAAACTTTGATGAAAGTTATTCTTACAGTCACAGTTACTGGCTGATTCTCAAGAGGGTCAAAAAAGCTTTTATAAGTGATTTTTTTCCTCTGTACTTGTTCCCCCTGCTTTCAAAGAGTGCCATCCTGGGAAGATTGATTGAGGAGAATTCAGACAGCGATGAATGTGTCATCAAATTGTCTGACATCCCTGGTGGCGCAAAATCGTTCGAGTTAGTGGCAAGGTTCTGTTATGGGCTGAAGATAGAGCTGTCTTCAGAAAATGTCGTCTACCTACGCTGTGCTGCTGAACATCTTGAGATGACAGAAGAAACATCTGGGGATAATCTGATTAATCAGACAGAGTCATTCTTTAACCAAGTAGTCCTCCGGAGCTGGAAAGATTCCCTGGAAGCGCTTCGGACATGCGATGGCCTTCTCCCTCATGCTGAAGACCTTCACATTGTGAAGAGATGCATCGAATCATTGGCTGGCAAAGCTAGCATCGATCCGGACCTCTTCGGCTGGCCAGTCTCGGAACATAGTACCATGCAAAGCCCCGGGGGAAGTGTCTTGTGGAATGGCATAAGCACGGGTGCGAAGGTTAGGAACTGCAGTTCGGACTGGTGGTATGATGATGCTTCCTTCCTGAGCTTCCCTACATACAAGAGGCTTATTTCTTCCATGGAGTCAAGAGGCATCAAACAGGAGATCATCGCGGGTTCGCTCACATACTGCGCCAAGAAGTTTCTCCCCGGGTTGAATAGGCGTCAAAGCACCGGACCAATGCCCCTGCCGGCTGCTACCCTGTCTGATGAAGAACAGAGGCGCCTGCTCGAAGAGATTGATAGGATGTTGCCACTTCAGAGAGGTTTAATATCCACAAATGTTTTGCTCTGGCTGCTCCGGACCGCCATGATCCTGAAAGTCGACCGCGCTTGCATTTCAAACTTGGAGAAAAGGGTCGGGATGCAGCTGGACGAAGCCACATTGGAGGATCTACTGCTGCCAAACTTCTCATACACCATGGACACGCTCTACAACGTCGAGTGCGTTCACAGGATTCTCGACCACTTCTTGGCAATGGATCAGACCATGGGTGGCGGTGGCGCCTCCCCATGCTTGGATGATGTGATGGCATCTCCTTCGTTGGCACCGATCACCGCTGTCGCGAAGCTGATTGATGGCTACCTTGCAGAGATTGCACCTGATATCAACCTAAAGCCACTGAAATTCCAGTCTCTGGCAGCTGCTTTACCTGAATATGCTCGGCCACTGGATGACGGTCTTTACCGCGCCATTGATGTATACCTGAAGTCGCATCCGACGCTGCCTGAAGCTGAACGGGAGCAGCTATGCCGGCTGATCGACTGCCAGAAGCTGTCGCTGGAGGCGTGCACCCACGCGGCGCAGAACGAGCGCCTGCCGCTGCGGGTGGTGGTGCAGGTGCTCTTCTTCGAGCAGCTGCAGCTGAGGACGTCGGTGGCCGGCTGCCTGCTCGTCTCCGACAACCTGGAGGCCTCGTCGAGGACGCTCCGCGGCGGCGCGGTGGCGGGGTCGGGTTCCCGCGGCGCTGACCCTTGCCGTGGGAGGAAGCGCGGGAGGCTGTTGACGCTCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGTCGGGGATGGAGGGGTGCTCGGCGCCAGCATGCGGCGATGTGCGGGGGGATTTCGTTGGATGGTGTTCGGACCGGCATCAGGTGGCTTCCTTCAGCGGCGACCAGACGCAAAGCGCCAGCATGTTTGCCGCGATGCAGGAGAACGCCTGCTCCATCGATAGCAAAGGTGTGGTGTGTCCGCAGTCCGGGCTAGGGTATTCAGCTGGCCAGAACGGGACACACGGCGGTGGCGGGTCTATGCAGCATCAGAATTTTGAAGGCTGCATGTATATGAATCAGCTTGGGCAGATGTGCGGCCCTTATCCACCTGAACAACTGTACGATGGATTATCCACTGGTTTCTTGCATCGAGACCTTGCTATTTATGCCGTTTTTGGTGGGAAAATGGCCAACCCTGTTTCCTTAGGTTCCCTGAAACAGTTTCTTTCACAATGGAGTTCTGATTCTGTGGTCGCCACAAGAGACGAATCGGCGGAGAATAAGAAAATGGCCCCTGTTAACAAATTGATTCTTCCTGATAATCTTTCCAGTGAAGAATCATGTTGGATGTTTGAGGACGCAGAAGGCCGCAGGCATGGGCCGCATTCTCTTGCTGAACTTTCTTATTGGCATCACAGTAGCTATCTACATGACCTTTCAATGATTTACCATGTTGATAGCAAGTTTGGCCCATTTACGCTTGTATCACTAATTGATTGGTGGAGTGGAGGCACAGAGCATTCAGAATCTTCAGCCAATGATTCTGGGTCACTGAACGCTTTAATGGATGATGTAGTTGAAGATATCAGCCATCAGCTGCATGCTGGAATTATGAAATCAGCCCGCAAAGTTTTTATTGATGAAATATTTAGCAGCGTACTTCCAGAAATGATTGCTTGCAGGAAGACAGAGAAGCAAATGGCTGCAAAACGTAAGAGCCAAGCTGCTAAGACTGACAATGTGAGTAACAAGAATGCTTTGGTACTTAAGGGCAAGGGTGATGGAACATCTACTCGTCCAAAAAGCCTAAACTCGTATAATAATAAAGTACCGGAAGATCCTTCTGTGGCTGTTCAATCAACTGCAATACAGTATGAATTTGCTGATATATTATCGGCAGTTTGGGAAACAATTTATAACAAATCCATGAAGAGTATCTGGGATGAAGTACTGTATGATCCTGTCATGGACTATTGTGATGCATGGCTTAAAAGAAAAAATGAGTCGAATCTTCTCTCTACAGTTGTTCCCGGAGCCTCTGATAACCAAAAGATGCAAGATACAGATGAAATGTCACCAAAGGCAATTTGTGATTCAGATGCTCCTGAAAGTGACATGGATTTCCCTCCAGGATTTGGACCAAATCGGGAATCTGCTGAGCATTCCCACTCTGCGTGTGTTGAGTATGTTACTGAAAAAACAGATGGGAGGTCTGGATCAAGTACCACGTTGTTTTCTGGCCCCTTAGGACGAGTTCAGGAACGAATTCGTACGCCTGTTCACGCACCAGAACCATCCAGTCCTCCTGGAATATCTGTGCATGAAACGCCCAGTCCCGCTGAAATGCCTCGAGATGAAATTTCGGATATGGCTGAAATGGCTCGAGATGAAATTTCGGATATGGCTGTAGATACAATACCCTGCCCTGCTGATATGGCGGCATCTGGAACATCAACTGTTCCTGAAGTGACAACAGACAAACTGATCATTCCTTACGTGGAACATCAATCGCCCTCTGCATCTCATGCAAGTATATTTGAAAAGTTGGATGTACATGAAGAAGCTGAATTGGATGACAGTTTTGATGAGGTGCCTCCTGGAACAGAGGCTGGCTTAGCTTCATTGGTGATTATGGAGAAAAACAAATACCAGTCCTCAAAATCAGTAGACTCAGTGCCTGACATTTATAGATATACTAATTGGGCATTCTTCAGGCAAATACTGCATGAGAGTGTAATGAAAGAGTGGGCATCTCTCTTCTCAGGTGCTCTCAGCAATTGTTTTGACTCATGGTATGCCAGGAAAAATATTGTGGCTAAAACCATGGATGATACATTGAGACCCAAAGAATATACTTACTACAGGAAGAGGAAACTGAGGAAAAACTGTGAAGCATCATCATCAGAAAAACCGATGGATGAGCAGCTCTCCAGACCTCTTCGTGATCTTGTTGAATGCAAGGTTAATATGAAAAATATCCATCGATCAAGCAAGGCTGGGATTTCGCAGAGAGTTTCTGTTGTGGAGAAGCCCTCCAAAAAGCGTGCCAAACCTTCACATAATGATAATATTAATCTGAATATCCAGCAGGACTTGAAACTCCTTTCTGACAAGGTGCCAAAGAGAAACAGGTCTTCCCATCCTACCAGTAAGCCTCTTGTTAGTAACAAAGTGCCTACTGAGGATAGAACTACATCAGCAATGCCTGCAAAGAAAAGAAAGCAGAAAAACTTGGCCACTGAGTCCAACCTGAAGACAAAAGCAGTAATTTTATCTCCAGAATCACATGGTTGTGAAGCGCCTACTGAGAAAAGAACTACAGCTATAATGCCTGTAAACAAAAGAAAGAAAAACTTGTCTGGTGAATCCAAACTGAAGGCAAAACCGTTAACAAGTCCAGAATCGTATGTTTGTGAAGCTCCTATTGACAATAGAACTACATCTACAATGCCTGCGAAGAAAAGAAAGCAGAAAAACTTGTCCAATGAGTCCAACCTGAAGAAAAAACCGTTGGTTTTATGTCCTGAATCATATGGTTGTGCAAGAGCTTCTGTGAGTGGATGGGAATGGCGTGATTGGGCACGCAATGCCACTCCATCAGAAAGAGCTCAAGTGAGAGGCTACCGAGTGAGGAGTATTCTCTCAGCTCCAGAAAATAATGTGTTGAAAAGTTCACAAGTTAAGGGCTCATCTGCAAGAACAAACCGGGTTAAGCTACGGAATCTGTTAGCAGCCGCTGAAGGCACTGACCTACTAAAAATTATGCAATCGAAGTCAAGGAAGAAGCGGCTACGTTTTCAAAGGAGTAAGATCCATGAATGGGGTCTGGTGGCTCTTGAGTCTATTGATGCAGAAGATTTTGTAATTGAATATGTTGGTGAGCTGATCCGTCGACAGGTCTCGGACATACGCGAGGATCAATACGAGAAAAGTGGAATTGGAAGCAGTTACCTTTTCCGTTTGGACGATGACTATGTGGTTGATGCTACTAAGCGTGGTGGGTTAGCAAGATTCATCAACCATTCTTGTGATGTGCCGCGGATCAATGAATTAGGAAGTAAAGTTTATAAGTCAGGAGGTAACTGCAATTGGGTGCTACCCCAGTATGTATGTGTCATGCGTGCTTGTCGATTGTACTGGGCAGAAGTTCACTGCAGAAATGTTCTCGGATTTACTGACAGGATGGTTAGATGGACTAATTCAGGCTATCCAGAGGAAGGCCAACAACATTATTACATTGACTGGATTGAGGATATAGAGTTTACACGGTACATGGATGCATTTAATCTATCATCCGTGGTGTATGTATATGTATTTCGTCCAGAAAAAAAAAGCATCCGAATCATGTGGTCAGCATGGGTGGATACAGACGTGCATGAATATCTGATATCACAATCGTGCGAACGGTGGGCCCAGGGAATATTCACACCCAGCACGAATCTTGACGCCCAACAGATTCACCAGGGACTTGACCTGGAATCAAGGCAGGAGGCCAGGGACGCCGCCGGCCCCGCCGTCGTGCTCTCCTACGCCGTCTCCGGCGTCTCCGCCATGCTCTCCGTCTTCTGCTACACCGAGTTCGCCGTCGAGATCCCCGTCGCTGGTCAGTGA
Protein Sequence:
- >KN539456.1_FGP007|Oryza_longistaminata|MYB_related|KN539456.1_FGP007
MGAPKQKWTAEEESALKAGIAKHGAGKWRTILKDPDFSNVLRYRSNVDLKDKWRNMNVTVNASGARDRVKAPVVKKPRSAPKHEGHSTSTAIAAVTSDGDDDVAEPVPLATSTSSKRSLSRLDNIIVEAVRSLNEPTGSYKTAIANYIEEQYWPPADFDHVLSSKLNDLTASGKLIKVNRKYRIAPSSSLSEGRSSKVVLLEDIKKEPTKLDREDVAVLTKSQIDAELARMRTMTAEEAAAAAARAVAEAEAIMAEAEAAVREAEAAEADAVAAQAFAEAAMATFKNRSSAKLVIALSTSVLVSNDHSSLKLPVGAGAASVSSDLVLFLMDNMVMLQRDVFNLVWLLFNSKSLKGPCILLFGCRSSTRIGSVWFLFRFVGGELRKKNTFLWGFGRIEMEDISSLKLQDLLMSHLVHKSDASRLMPMLTYILMTDELYCTTGLPSDVLVEVGEMSFHLHKMHEAICTTLLVIMENFEEMSFNEQPQLTFCTPSYSRNFDESYSYSHSYWLILKRVKKAFISDFFPLYLFPLLSKSAILGRLIEENSDSDECVIKLSDIPGGAKSFELVARFCYGLKIELSSENVVYLRCAAEHLEMTEETSGDNLINQTESFFNQVVLRSWKDSLEALRTCDGLLPHAEDLHIVKRCIESLAGKASIDPDLFGWPVSEHSTMQSPGGSVLWNGISTGAKVRNCSSDWWYDDASFLSFPTYKRLISSMESRGIKQEIIAGSLTYCAKKFLPGLNRRQSTGPMPLPAATLSDEEQRRLLEEIDRMLPLQRGLISTNVLLWLLRTAMILKVDRACISNLEKRVGMQLDEATLEDLLLPNFSYTMDTLYNVECVHRILDHFLAMDQTMGGGGASPCLDDVMASPSLAPITAVAKLIDGYLAEIAPDINLKPLKFQSLAAALPEYARPLDDGLYRAIDVYLKSHPTLPEAEREQLCRLIDCQKLSLEACTHAAQNERLPLRVVVQVLFFEQLQLRTSVAGCLLVSDNLEASSRTLRGGAVAGSGSRGADPCRGRKRGRLLTLEEEEEEEEEEESGMEGCSAPACGDVRGDFVGWCSDRHQVASFSGDQTQSASMFAAMQENACSIDSKGVVCPQSGLGYSAGQNGTHGGGGSMQHQNFEGCMYMNQLGQMCGPYPPEQLYDGLSTGFLHRDLAIYAVFGGKMANPVSLGSLKQFLSQWSSDSVVATRDESAENKKMAPVNKLILPDNLSSEESCWMFEDAEGRRHGPHSLAELSYWHHSSYLHDLSMIYHVDSKFGPFTLVSLIDWWSGGTEHSESSANDSGSLNALMDDVVEDISHQLHAGIMKSARKVFIDEIFSSVLPEMIACRKTEKQMAAKRKSQAAKTDNVSNKNALVLKGKGDGTSTRPKSLNSYNNKVPEDPSVAVQSTAIQYEFADILSAVWETIYNKSMKSIWDEVLYDPVMDYCDAWLKRKNESNLLSTVVPGASDNQKMQDTDEMSPKAICDSDAPESDMDFPPGFGPNRESAEHSHSACVEYVTEKTDGRSGSSTTLFSGPLGRVQERIRTPVHAPEPSSPPGISVHETPSPAEMPRDEISDMAEMARDEISDMAVDTIPCPADMAASGTSTVPEVTTDKLIIPYVEHQSPSASHASIFEKLDVHEEAELDDSFDEVPPGTEAGLASLVIMEKNKYQSSKSVDSVPDIYRYTNWAFFRQILHESVMKEWASLFSGALSNCFDSWYARKNIVAKTMDDTLRPKEYTYYRKRKLRKNCEASSSEKPMDEQLSRPLRDLVECKVNMKNIHRSSKAGISQRVSVVEKPSKKRAKPSHNDNINLNIQQDLKLLSDKVPKRNRSSHPTSKPLVSNKVPTEDRTTSAMPAKKRKQKNLATESNLKTKAVILSPESHGCEAPTEKRTTAIMPVNKRKKNLSGESKLKAKPLTSPESYVCEAPIDNRTTSTMPAKKRKQKNLSNESNLKKKPLVLCPESYGCARASVSGWEWRDWARNATPSERAQVRGYRVRSILSAPENNVLKSSQVKGSSARTNRVKLRNLLAAAEGTDLLKIMQSKSRKKRLRFQRSKIHEWGLVALESIDAEDFVIEYVGELIRRQVSDIREDQYEKSGIGSSYLFRLDDDYVVDATKRGGLARFINHSCDVPRINELGSKVYKSGGNCNWVLPQYVCVMRACRLYWAEVHCRNVLGFTDRMVRWTNSGYPEEGQQHYYIDWIEDIEFTRYMDAFNLSSVVYVYVFRPEKKSIRIMWSAWVDTDVHEYLISQSCERWAQGIFTPSTNLDAQQIHQGLDLESRQEARDAAGPAVVLSYAVSGVSAMLSVFCYTEFAVEIPVAGQ