Gene Details:

  • Gene ID: Itr_sc000408.1_g00006.1
  • Gene Family: MYB_related Family
  • Description: MYB_related Family protein
  • Species: Ipomoea trifida
  • Source: MYB_related family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_019173500.1  — PREDICTED: uncharacterized protein LOC109169061
  • Swissprot:  Q9LVS0  — KUA1_ARATH; Transcription factor KUA1
  • TrEMBL:  A0A0V0IA26  — A0A0V0IA26_SOLCH; Putative MYBST1 protein-like
  • TrEMBL:  M1CHD3  — M1CHD3_SOLTU; Uncharacterized protein
  • STRING:  PGSC0003DMT400067489  — (Solanum tuberosum)

Gene Ontology:

  • GO:0000122  — Biological Process — negative regulation of transcription from RNA polymerase II promoter
  • GO:0009651  — Biological Process — response to salt stress
  • GO:0009723  — Biological Process — response to ethylene
  • GO:0009737  — Biological Process — response to abscisic acid
  • GO:0009739  — Biological Process — response to gibberellin
  • GO:0009751  — Biological Process — response to salicylic acid
  • GO:0009753  — Biological Process — response to jasmonic acid
  • GO:0030307  — Biological Process — positive regulation of cell growth
  • GO:0046686  — Biological Process — response to cadmium ion
  • GO:0048366  — Biological Process — leaf development
  • GO:2000469  — Biological Process — negative regulation of peroxidase activity
  • GO:0000976  — Molecular Function — transcription regulatory region sequence-specific DNA binding
  • GO:0008270  — Molecular Function — zinc ion binding

Family Introduction:

  • A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.

Literature:

Sequences:

CDS Sequence:
  • >Itr_sc000408.1_g00006.1|Ipomoea_trifida|MYB_related|Itr_sc000408.1_g00006.1
    ATGACGCGACGGTGCTCGCATTGCAGCAACAACGGCCACAACTCCCGGACTTGCCCTAACCGAGGGGTGAAGCTCTTCGGCGTTCGATTGACGGATGGGTCGATCCGGAAGAGTGCTAGTATGGGTAACTTGACCCACTATGCCGCCAGTAACGGCAGCGCTGGCTCAACTACTCCCCACAATGGTATCGCCCATGACTCCCCCGGGGATACGCCGGATCACCCCTCCGCCGCCTCCGCCGCCGCCGCTGATGGCTATGCCTCCGAGGACTTCGTTCCTGGATCCTCCTCCAGTCGCGAAAGAAAGAAAGGTGTTCCATGGACCGAAGAGGAACATAGGATGTTTCTTCTTGGTCTACAAAAGCTTGGAAAAGGTGATTGGCGTGGAATTGCTCGCAATTATGTGGTTTCAAGAACACCTACTCAAGTTGCAAGCCATGCTCAAAAATATTTTATCAGGCAAAGTAATGTATCGAGGCGTAAAAGGCGCTCCAGCCTATTTGATATTGTTGCAGATGAACCAGTTGACACTCCAATGGAATCTCAAGATTTCCTTTCCACCAATCATCTTGAGGCCGAGCCACAGAGCAATAATAATGCGTTACCACCTCCTCCTAATCTGGACGAAGAATGTGAATCTATGGGTTCTGCTGCTTCTGCCAACTCCAATGATGGAGAAACCATGCATCAAAATCCCGAGAGCTCCCAATACTCTTATCCAGTTGTATATCCAGCTGCCGCTGCTGCTTATGTGACTCCGATATATCCATTGCCCATTCCATATTGGCCAGGGTACTGTCCAGAGCCAGCCAAAGCAGAGAAGCACGAAGTGTTCAAGCCAACAGCAGTCCATACAAAGAGTCCCATTAACGTTGATGAATTAGTTGGTATGTCGAAGTTAAGCTTAGGGGAATCGCTCGCTGATGTCAAGCCATCTGTGTCTCTGAAGCTAGTCGAAGGCTCAACAAGGCAGTCAGCCTTCCATGCTAAACCTGCCGCCGCCTCTGGTAATTCCAGCATCAGCTCTAGCCACAACCCAATCCACGCGGTCTAG
Protein Sequence:
  • >Itr_sc000408.1_g00006.1|Ipomoea_trifida|MYB_related|Itr_sc000408.1_g00006.1
    MTRRCSHCSNNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLTHYAASNGSAGSTTPHNGIAHDSPGDTPDHPSAASAAAADGYASEDFVPGSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEPVDTPMESQDFLSTNHLEAEPQSNNNALPPPPNLDEECESMGSAASANSNDGETMHQNPESSQYSYPVVYPAAAAAYVTPIYPLPIPYWPGYCPEPAKAEKHEVFKPTAVHTKSPINVDELVGMSKLSLGESLADVKPSVSLKLVEGSTRQSAFHAKPAAASGNSSISSSHNPIHAV