Information report for IGS.gm_5_00281
Gene Details
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Functional Annotation
- Refseq: XP_005849821.1 — expressed protein
- TrEMBL: E1Z955 — E1Z955_CHLVA; Expressed protein
- STRING: XP_005849821.1 — (Chlorella variabilis)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_19181
- Malus domestica: MDP0000187927
- Musa acuminata: GSMUA_Achr10P06560_001
- Petunia inflata: Peinf101Scf00559g13006.1
- Setaria italica: SETIT_014685mg
- Solanum tuberosum: PGSC0003DMG400011294, PGSC0003DMP400020008
- Zea mays: GRMZM2G175265_P01, GRMZM2G175265
Sequences
CDS Sequence:
- >IGS.gm_5_00281|Chlorella_variabilis_NC64A|MYB_related|IGS.gm_5_00281
ATGGCTACAGATGACGACGCCGAAATAGCTCGGCTGCTGGCCGTTGAAAACCCGGAGCAGTATTACGAATATGATTTTGGAAACGAGGAAGATGACCCTGACGACGGGGATGATCCTGACTATGGGGCGGGCAAGAAGGGCGGCAGGAAGGGAAAGAAGAAGAAGGCCGCCGAGGCAGGTGGATTGGCCTCTGCAGCGACGGGCTTTGACCCCGCGACCACCGCGGCGGCAGCTGCATATGCCTTGCCTGCAGTCACAGCAACGGGACCTGCCGCTGCCGGTGCCGCGCCCGCCACGGCGGAAGCGCAGCATGGCATGATGGTGAACGGCGTGACTGCAATGCCGGGGGCGGCACTGCCCGGCGTGATGCCGGGGGCGTCGATGCAGATCATGCTGCAGCAGCAGGCGTTGGCAGCAGCACTGGCTGCAGGCGGCGGGGCGGGCATGACGGGCCTGCAGATTGCACTGCCCCCGGGGGTCAGCCTGGAGCAGGCGTCGATGATGGGCCTGCCTATCATGGCCCTACCAGTGCAACTGCCGCAAGCCGGCGGCGGCATCGCAGACGCGCCTGGCTCGACAGCCACCGCCGCCACGCTGCCCATGGCGCCAGGGTCCACCGCCGCGGTACTTCCGAGGGTGGGAGGAGTGGGCGGCATGCCAGCAGCAGCTGCGGCGGTGGCCAAGCCTGCAGCAGGGGCAGGTGCTGGCGGGGGCAAGTCGTCTGACGGCGACGAGTTCACTGCCACGGGGCGGCGCAAGCGCAAGGACACAGGCAAGCAGCGGCAGCAGTCGCGCAGCTGGACGGACGAGGAGGAGCGGTTGTTCCTGGAGGCGCTGCAGCTGTATGGCAGGGACTGGAAGCGCTGTGCGGAGCATGTGGGCACCCGCGACCACCGCGCCTTCACCAGCCATGCACAGAAGCACTTCATCAAGCTGCTGCTGCGGGGCGAGGAGGTCCCCCCAAAGGTGGCGGAGACGGGCCGCGGCTACACGCTGTCGGGCAAGTCTCTAGACCCAAACTCTGCGGCTGCGCGCGCCTATGGGCTCAAGCCCGACCTCTTTACACGCATTGCGGGCACCGGAAAGTTGGTTGTGGGGGTGCACGTGACAACGCTGGACATGAGCGATGGGCCGCCGCCGCAGATCCAGCGTTCACGCGGCGGCAAGAGCCCCCTGGGCGGCGGTGGTGGCGGCGGCGGCAAGCGGCAGCGGCGCGGCAAGAGCAGCGGCGAACGGTTTGGGAGCGAGTACGAGACTGAGGAAGAGGATGAGGATGCGTTCCTGGCCTCGGCCATCCAGGGAGAGGTGGCGGAAGCGGCTGAACCAACAGAGTATGTCCGCAATCGGCCGCGGCGGCAGGTTGGGCGGCGCATGCAGCTGGGTGAGACCACAGAGTCCACGGACCTCACTCATCTGGACAGCTTTGTGGGGCCGCCCGGCACCGGGGCGCCCATGGCCCAGCCCTTCCAGGTGACCATCGACAGGCAGGCGGTGCTGGTCATGGACTTCCACGCACACCTCAGCCGGTGTGAGATTATTGGGCTGCTGGGCGGCGCCTTTGATGCTGAGCGGCGTATGCTGGAGATCCGGGAGGCCTACCCCTGCCGCCGTGCAGAGGGGCAGGCATCTGGCACGTCGGTGGAGCTGTGTGCTGAGAGCCAGGTGGAGGTCAGCGGGCTTATGGAGGAGCGAGGGCAGGTGCCGGTGGGCTGGTACCACTCGCACCCTGTGTTTGAGCCACGCCCCTCGCAAAAAGACAACGAGAACCAGCGCAACTACCAGGCGCTGTGCCGCGATGCTGCCACCGGGCTGGAGCCCTGGGTGGGCGCAATTGTGGGGCCGTACGACCAGGGGCTGGAGAGCGCGAGCTCCCAGATGCAGCTGTGGGTGGTGAAGATGCACAACGGCGAGCTGCGCCCCTTCAGCATCCGTGCACTCACCACTGGCGGGGATACAATGCCCACGCAACACACCGAGCAAGCAGTCGCCATGGCATTGGACCAGCTAGACGGCGACGTGGGGCGGGTGGATTTGTCGGAGCAATGGCGCCCCTACTCTCGCCTGAGCATGCAGCAGCCCGAGGGCCCACCGCTCACCAAGATTCAAAAGTTGCGGGAGTCGCTGGCAGCGCACCTGCCGGCGGCGGAGCACCCGGCTGAGCAGCAGGCAGCTGCTATGCCAAAGCTTGACGACCCCGAGGGCTATGACCTGCCATCCCGCCAGCAGTTTTCGATGGCAGTGCCAGGCATGCTCAAACAAGAGTGA
Protein Sequence:
- >IGS.gm_5_00281|Chlorella_variabilis_NC64A|MYB_related|IGS.gm_5_00281
MATDDDAEIARLLAVENPEQYYEYDFGNEEDDPDDGDDPDYGAGKKGGRKGKKKKAAEAGGLASAATGFDPATTAAAAAYALPAVTATGPAAAGAAPATAEAQHGMMVNGVTAMPGAALPGVMPGASMQIMLQQQALAAALAAGGGAGMTGLQIALPPGVSLEQASMMGLPIMALPVQLPQAGGGIADAPGSTATAATLPMAPGSTAAVLPRVGGVGGMPAAAAAVAKPAAGAGAGGGKSSDGDEFTATGRRKRKDTGKQRQQSRSWTDEEERLFLEALQLYGRDWKRCAEHVGTRDHRAFTSHAQKHFIKLLLRGEEVPPKVAETGRGYTLSGKSLDPNSAAARAYGLKPDLFTRIAGTGKLVVGVHVTTLDMSDGPPPQIQRSRGGKSPLGGGGGGGGKRQRRGKSSGERFGSEYETEEEDEDAFLASAIQGEVAEAAEPTEYVRNRPRRQVGRRMQLGETTESTDLTHLDSFVGPPGTGAPMAQPFQVTIDRQAVLVMDFHAHLSRCEIIGLLGGAFDAERRMLEIREAYPCRRAEGQASGTSVELCAESQVEVSGLMEERGQVPVGWYHSHPVFEPRPSQKDNENQRNYQALCRDAATGLEPWVGAIVGPYDQGLESASSQMQLWVVKMHNGELRPFSIRALTTGGDTMPTQHTEQAVAMALDQLDGDVGRVDLSEQWRPYSRLSMQQPEGPPLTKIQKLRESLAAHLPAAEHPAEQQAAAMPKLDDPEGYDLPSRQQFSMAVPGMLKQE*