Gene Details:
- Gene ID: HL.SW.v1.0.G032236.1
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Humulus lupulus
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_010087464.2 — transcription factor MYB41
- Swissprot: Q9SBF3 — MYB92_ARATH; Transcription factor MYB92
- TrEMBL: A0A2P5BL54 — A0A2P5BL54_TREOI; MYB transcription factor
- TrEMBL: W9QDG2 — W9QDG2_9ROSA; Transcription factor
- STRING: XP_010087464.1 — (Morus notabilis)
Gene Ontology:
- GO:0003677 — Molecular Function — DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >HL.SW.v1.0.G032236.1|Humulus_lupulus|MYB_related|HL.SW.v1.0.G032236.1
ATGGGGAGATCACCCTCTTCTGATGAGAATGGGTTGAAGAAAGGGCCATGGACTCCAGAAGAGGACGAGAAGCTTGTGGATTACATCAGAAGACATGGCCATGGAAGCTGGAGAGCTCTGCCTAAGCTTGCTGGTTTGAACAGGTGTGGCAAGAGTTGCAGACTTCGTTGGACTAATTATCTGAGGCCTGATATCAAGAGAGGAAAGTTCTCTGAAGATGAAGAGAAACTCATCATCAATCTCCATGCTGTTCTTGGCAACAAGTAA
Protein Sequence:
- >HL.SW.v1.0.G032236.1|Humulus_lupulus|MYB_related|HL.SW.v1.0.G032236.1
MGRSPSSDENGLKKGPWTPEEDEKLVDYIRRHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSEDEEKLIINLHAVLGNK*