Information report for GSVIVT01017770001
Gene Details
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Functional Annotation
- Refseq: XP_010649755.1 — PREDICTED: protein ALWAYS EARLY 3
- Swissprot: Q6A332 — ALY3_ARATH; Protein ALWAYS EARLY 3
- TrEMBL: F6HDG1 — F6HDG1_VITVI; Uncharacterized protein
- STRING: VIT_05s0020g01610.t01 — (Vitis vinifera)
- GO:0005730 — Cellular Component — nucleolus
- GO:0016592 — Cellular Component — mediator complex
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Beta vulgaris: Bv_012080_sqjh.t2, Bv_012080_sqjh.t1
- Cajanus cajan: C.cajan_04254
- Capsicum annuum: CA01g25810
- Citrus sinensis: orange1.1g001101m, orange1.1g001099m
- Populus trichocarpa: Potri.008G216600.1
- Prunus mume: XP_016647952.1, XP_016647953.1
- Prunus persica: Prupe.1G139300.6.p, Prupe.1G139300.1.p, Prupe.1G139300.5.p, Prupe.1G139300.2.p, Prupe.1G139300.4.p
- Pyrus bretschneideri: Pbr031037.1
- Ricinus communis: 29726.m004015
- Sesamum indicum: XP_011071462.1, XP_011071461.1, XP_011071460.1, XP_011071459.1
Sequences
CDS Sequence:
- >GSVIVT01017770001|Vitis_vinifera|MYB_related|GSVIVT01017770001
ATGGCGCCAACAAAGAAGTCGAGAACTGTGACTAAGCGATTCTCTTACGTTAGTGACATCTCCCCCAAGAAGGACGGTGAAAAGGCTAACAAGAGTGGGCTGCGGAAGAGGAAATTATCTGACATGCTAGGGTCTCAATGGAGCAAAGAAGAGCTTGAGCGTTTCTATGAAGCATATCGCAAGCATGGGAAAGATTGGAAAAAGGTGGCTTCAGTAGTTCGTAATCGATCTGTGGAAATGGTTGAGGCACTTTACACAATGAATAGGGCTTACTTATCTCTTCCTGAGGGGACTGCTTCTGTGGTTGGACTAATAGCAATGATGACTGACCACTACACGGTTCTGGAGGGAAGTGATAGTGGACAAGAAAGCAATGATGGAACCGGAACATCACGAAAACCTCCAAAACGTGGTCGGGGAAAAATTCGGCCTAACTCATCTAAAGAATTGGATGGGCATTTTCCTGATCTGTCGCAGTCACCTTTAGCTGCATCAAGTTATGGTTGCCTTTCATTGTTGAAAAAGAAGCGCTCTGGTGGAAGTAGACCACGAGCTGTTGGAAAAAGGACACCCCGATTTCCTGTTTCATATTCATATGATAAAGATAATGGCCAGAAGTACTTTTCTCCAACTAGGCAAGGTCTGAAATTAAAGGTAGATTCTGTTGACGATGATGTTGCTCATGAGGTAGCATTAACATTGGCAAAAGCGTCACAGAGGGGTGGTTCTCCTCAAAAGGGGAAGAAATTTTATGGGAAGAAGGCAGAAGTTGAAGATAGTGGTAACAATCATTTGGATGACATAAAAGAAGCTTGTAGTGGGACGGAGGAGGGACAAAAGCTGAGTGCTGTCAGAGGAAGACTTGAAACAGAGGTTGTGGATGCAAAAATTGTACGGTCCTCTTCTCAGGGTACAAGGAAGAGAAGCAAAAAGGTTCTTTTTGGAGGAGATGAAGGCACTGCCTTTGATGCCCTGCAAACTTTGGCAGATTTATCCTTGATGATGCCTGCAACAAATATTGACACTGAGTCATCTGTTCCAGTCAAGGGAGAAAATATTGATATCGTTGATGAGTCTAAGACGCTGGATGTTATGCCTGTGAACCATAGAAGAGAAAAACCTAGAACCTTGGGAGCTAAAGTGAAAGGGAATAATTCAGTTCCTGGAGTCAACATCCCACCTCTTAAAGCATCGAAACTCGAAAAATTCTCAGCACTTGATATTAGTTCTTTCCCTGAAATAAAGGAGGGGCCTCAACCATCTATCACGGGAAGCCGGAAAAGAAAACAGAAGTCCTTTGGCTTTAAGGGTATGGAAAGTGAAACTCATTCCGATTCTAATTTGAGTGTTTCCCAAAAAACTGAGGCTACAGATGAAGGGAAGAAACCTGTGAGTAAAGGTAAACGCTCTTCTCATAGTGCTTCACACCCAAAACAAGGGAAGTTGGTAAAACCTCCAGAACGCTGTTCTTCAAGTACTGAAACCAGAAGAGAGGAGAACTATTTGGTTGTACCTGCACAGGTTTCTTCTGCCAACCAGGTTCATTTACCTACTAAAGTGAGAAGCAGGCGTAAGATGGATACTCAGAAGCCATCTTTCCAGAAAGATTTGAGGTTTGCTGAGAATTATGTAAATGACCAACCTATAATACCCATTCCTTCAGTCCAGGACAGGGCACGCACTCTTAAGGAAAAGCTTTCTAATTGCCTATCTTGCTATCGGGTACGGAGATGGTGTGCTTTTGAGTGGTTCTACAGTGCAATTGATTACCCATGGTTTGCTAAAAAGGAATTTGTGGAGTATTTGGATCATGTAGGGTTGGGCCATGTTCCAAGATTGACTCGTGTTGAATGGGGTGTCATAAGAAGTTCTCTTGGAAAACCGCGGAGATTTTCTGAGCAATTCTTAAAGGAAGAAAAGGAGAAGCTTAACCAATATCGTGATTCTGTTAGAACACATTATACTGAACTTCGTGCTGGTACCAGGGAGGGACTTCCAACTGATCTAGCACCACCTTTATCAGTTGGACAACGTGTTGTTGCTCTTCATCCCAGGACAAGAGAGATTCATGATGGAAAAGTTTTAACAGTTGATCGTACTTGGTGCCGGGTTCAATTTGAGCGACCTGAACTAGGGGTCGAATTAGTTATGGATATTGATTGTATGCCCCTAAATCCATTGGAAAACATGCCTGCATCTCTTACAAAACACAGTCTAGCTGTCAATAAATTCTTTGAGAATGTCAGTGAGCTCAAAATGAACGGAGGACCAAAAGACAGGAAAATAACAGAGTATGGGAAATTTTCTACGAGTGAGAACATGGAGAATGTCGATGGCCCTTCTCATCTTTCCCCATCAACCTATCCCATTAACAATTTATTAAAGCAGACAAAGGCGGGTTCAACAAATGCTAATTTCCATGCTAAAGTTGGATCTGGTGAAGCTGCTAATTCTCAACAAGTGGCAAATTCTCAATCTATTATACTGGCACAGAACCAAGGAAAGGAAGCTGATGTCCAAGCTCTTTCTGAGCTGACTCGTGCTCTTGACAAAAAGGAAGCAGTGTTGTGTGAATTGAGGCGCATGAATGATGAGGTGTCGGAAAACTATAAAGATGGGGACAGCTCTCTTAAAGAGTCAGATCTTTTCAAGAAGCAATATGCTGCTCTACTTGTGCAGTTAAATGAAGTTGATGAACAGGTTTCTTCTGCTTTGATTCGCTTGAGGCAACGCAATACTTATCGAGGAAACTCCCCAGTTACATGGCCAAAGCCCATGGCCAGTTTAGCTGATCCTGGTGGCCTTATGAGCTCATTTGATTGTTCTTCATGCTACACACAAGAATCGGGAACCCATGTAGTTGAAATTGTTGAAAGTTCAAGAAAGAAAGCCCGAACCATGGTAGATGCAGCTATGCAGGCAATGTCATCATTAAAGGAAGAGGGAAATAATGTTGAGAGGATTGAGGATGCTATAGATTTTGTGAACAATCGACTTTTAGTAGATGATTCTGGCATGTCAACTATGAGATCTTCTGCTGCCCCAGATCCACTTCATGGCAGTTTGGCTTCTCAGGATCAGTTTACTTCTTGTACATCAAACCCATTGTCAGGTAGTCAGGCACCTGATCTTAAGTTGAACATTTCATCTGATGACAATGAAGCACAGATCCCTGCAGAACTGATCACACACTGTGTTGCTACTTTGCTCATGATTCAGAAATGTACAGAACGACAGTTTCCACCAGCCAATGTGGCCCAGATATTGGATTCTGCTGTTACAAGTTTGCAGCCTTGCTGTTCGCAGAACCTTCCAATTTATGCAGAGATACAAAAGTGCATGGGAATCATTAGGAATCAGATATTGGCACTCATACCTACATAG
Protein Sequence:
- >GSVIVT01017770001|Vitis_vinifera|MYB_related|GSVIVT01017770001
MAPTKKSRTVTKRFSYVSDISPKKDGEKANKSGLRKRKLSDMLGSQWSKEELERFYEAYRKHGKDWKKVASVVRNRSVEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYTVLEGSDSGQESNDGTGTSRKPPKRGRGKIRPNSSKELDGHFPDLSQSPLAASSYGCLSLLKKKRSGGSRPRAVGKRTPRFPVSYSYDKDNGQKYFSPTRQGLKLKVDSVDDDVAHEVALTLAKASQRGGSPQKGKKFYGKKAEVEDSGNNHLDDIKEACSGTEEGQKLSAVRGRLETEVVDAKIVRSSSQGTRKRSKKVLFGGDEGTAFDALQTLADLSLMMPATNIDTESSVPVKGENIDIVDESKTLDVMPVNHRREKPRTLGAKVKGNNSVPGVNIPPLKASKLEKFSALDISSFPEIKEGPQPSITGSRKRKQKSFGFKGMESETHSDSNLSVSQKTEATDEGKKPVSKGKRSSHSASHPKQGKLVKPPERCSSSTETRREENYLVVPAQVSSANQVHLPTKVRSRRKMDTQKPSFQKDLRFAENYVNDQPIIPIPSVQDRARTLKEKLSNCLSCYRVRRWCAFEWFYSAIDYPWFAKKEFVEYLDHVGLGHVPRLTRVEWGVIRSSLGKPRRFSEQFLKEEKEKLNQYRDSVRTHYTELRAGTREGLPTDLAPPLSVGQRVVALHPRTREIHDGKVLTVDRTWCRVQFERPELGVELVMDIDCMPLNPLENMPASLTKHSLAVNKFFENVSELKMNGGPKDRKITEYGKFSTSENMENVDGPSHLSPSTYPINNLLKQTKAGSTNANFHAKVGSGEAANSQQVANSQSIILAQNQGKEADVQALSELTRALDKKEAVLCELRRMNDEVSENYKDGDSSLKESDLFKKQYAALLVQLNEVDEQVSSALIRLRQRNTYRGNSPVTWPKPMASLADPGGLMSSFDCSSCYTQESGTHVVEIVESSRKKARTMVDAAMQAMSSLKEEGNNVERIEDAIDFVNNRLLVDDSGMSTMRSSAAPDPLHGSLASQDQFTSCTSNPLSGSQAPDLKLNISSDDNEAQIPAELITHCVATLLMIQKCTERQFPPANVAQILDSAVTSLQPCCSQNLPIYAEIQKCMGIIRNQILALIPT*