Information report for GSMUA_Achr10P22470_001
Gene Details
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Functional Annotation
- Refseq: XP_009380612.1 — PREDICTED: pentatricopeptide repeat-containing protein At2g41080
- Refseq: XP_018674557.1 — PREDICTED: pentatricopeptide repeat-containing protein At2g41080
- Swissprot: Q8S9M4 — PP198_ARATH; Pentatricopeptide repeat-containing protein At2g41080
- TrEMBL: M0RKH2 — M0RKH2_MUSAM; Uncharacterized protein
- STRING: GSMUA_Achr10P22470_001 — (Musa acuminata)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT3G46790, AT3G12770, AT3G11460
- Citrullus lanatus: Cla97C09G165370
- Gossypium hirsutum: Gh_A13G0768
- Juglans regia: Jr12_20270
- Malus domestica: MD17G1217600, MDP0000266172
- Oryza sativa: OsPPR16, EMP5;OsEMP5
- Panicum virgatum: Pavir.3NG108400.1.p
- Prunus persica: Prupe.3G093300
- Rosa chinensis: RchiOBHm_Chr5g0011421
- Saccharum spontaneum: Sspon.02G0050800-1C
Sequences
CDS Sequence:
- >GSMUA_Achr10P22470_001|Musa_acuminata|MYB_related|GSMUA_Achr10P22470_001
ATGAAGACAACAAGATCGTGGATGGATGTCCTTCCTTGCAGCACGAACCGGTTCGTTCGCCAGGAAAACGGCGGGAGGTGGACTCAGGAGGAGAACAAGCGCTTCGAGGACGCCCTGGCAAAATTCGACGGAGACACCCCGGACCGATGGGAAAAGGTGGCGGCTTTGATCCCTGGGAAGACGGTGCCAGATGTGCTTAGCCATTACCGGGAATTGGTGGACGACGTCAGCGAGATAGAAGCCGGCCGGAGCATCTCATCACGAGAGGAAGAAAGGAATCCCTTGGACCGAAGAGGAGCACAGGCAAGCTTCTTCATCTTTTGCATGCATCTTTGGACTTCAATTCCCAACCTGCTGTTCTTGCTTGGACTGGACAAGTGTGGTAAAGGAGACTGGAGAAACATCTCTAGAAATTTCGTGATGACCAGGACTCCTACTCAGGTGGCCAGTCATGCCCAGAAGTACTTCATCAGGCTCAACTCTGGCAGCAAAGACAAGAGAAGGACCAGCATACATGACATTACTACTGTCGATTTGCCTGATAATAAACCTCCCTCACCATCTTCCCAACCATCCACTGTTACCACACAATCAAGTTTAGCTATGACACCTTCATTGTCAGGCCAATTATCCGCCATTCTCGATTCAGATCAACTCGGTGAAGTAGCTAGTGTCTTCAATCCATCATCACACGGCAATAAACTCATGCAGCGTCACTTTGGAATATCTCAACACAGGATGAAACTACAACCTCAAATGTTACCCTCGCTCATGGATGAGCTCGTCTCCACCGCCGCCCGCTTCCCAAAGTCCGAGCAGGAGTTCGTCCATCTATGCTCCAAAGGTCGTCTCCGAGAAGCCCTGCGAGGGTTCCTGCCCGAGCTATGGTCCGACCCAAATCTCTTCTCCCACCTCCTCAACGGCTGCTGCGTCCCGCAGCAGTCCCTCCGCCAGGGCCAGCAGATTCACGCCCTCATCGTCGCCGCCGGCGCTGCCTCCCACCGCTTCACAGCCAACCACCTCCTCCACATGTACTCCAAGCTCGGTCAGGGAAATGCCGCCCGCGCTTTGTTCGATGAAATGCCCGAGAGGAATGTCGCCTCCTGGAATGCCATGATCACCGGCCTCGCCCATTTTGAGTTGGACGAAGAAGGGCTGGAGTTCTTCCGGATGATGAGGGAAGCGGGCTTGAGGCCCGATGAATTCGGTCTAGGCAGCGCCTTGAGATGTTGTGCAGGGCTGAAAGACATTGAGAGGGTTCTAAAAGGATTGCCTACCATTAACGTAGTATCATGCAATACCATAATTGCAGGAAGAGCACAGAATGGGGACACCGAAGGAGCAGCAATCCAGCTTTTTGACAAGATGGTCAGAGAAGGGACTGATCCCAGTGAAGTGACATTCTTAAGCTTGCTGTATGCTTGCAGCCATAGTGGGTTGAAGGATAAGGGAAAAGAATATTTTGAGCTCATGATGCATAAATATGGATTCAAGCCTACTCTGAAGCACTACACTTGCATGGTGGATCTTCTTGGGCGATCAGGATGTCTGGATGAGGCTGAAACTCTTATCAGATCTATGCCCATTCCAGCTGATGCTGTCATTTGGAAGACCTTGTTGTCTGCCTGTAAAACCCATAAGAATGCAGAGATGGCAGAGAGAGTGGCAGAGTGTGTTCTGAGGTTGGACCCTCAGGATTCTGCTTCTTATGTGCTGCTATCGAATATTCGAGCCACCACTGCCAGATGGATTGATGTTTCTGAGGTAAGGAGAGCTATGAGGGAGAAGAGAGTGAGGAAGGAGCCTGGAATCAGCTGGGTAGAGTACAAGGGCCAGGTCTATCAGGAGTTAGGATATTTACCAGACACTAGCACAGTCTTCCATGACATGGAGGAAGAGGAAAAAGAGACCAGTTTGGCTCACCACAATGAAAAGTTGGCCATTGCATTTGCCATTCTAAGCTTGCCAGTCGGAGTTCCAATTCGAATTATGAAAAACTTACGTGTCTGCGATGATTGTCACGAAGCAATTAAGTACATATCCAAAATTGCAGAGCGAGAAATTGTGGTGAGGGATGTTACCCGGTTTCATCACTTCAGAGATGGAGAATGTTCTTGTAAAGGTTACTGGTGA
Protein Sequence:
- >GSMUA_Achr10P22470_001|Musa_acuminata|MYB_related|GSMUA_Achr10P22470_001
MKTTRSWMDVLPCSTNRFVRQENGGRWTQEENKRFEDALAKFDGDTPDRWEKVAALIPGKTVPDVLSHYRELVDDVSEIEAGRSISSREEERNPLDRRGAQASFFIFCMHLWTSIPNLLFLLGLDKCGKGDWRNISRNFVMTRTPTQVASHAQKYFIRLNSGSKDKRRTSIHDITTVDLPDNKPPSPSSQPSTVTTQSSLAMTPSLSGQLSAILDSDQLGEVASVFNPSSHGNKLMQRHFGISQHRMKLQPQMLPSLMDELVSTAARFPKSEQEFVHLCSKGRLREALRGFLPELWSDPNLFSHLLNGCCVPQQSLRQGQQIHALIVAAGAASHRFTANHLLHMYSKLGQGNAARALFDEMPERNVASWNAMITGLAHFELDEEGLEFFRMMREAGLRPDEFGLGSALRCCAGLKDIERVLKGLPTINVVSCNTIIAGRAQNGDTEGAAIQLFDKMVREGTDPSEVTFLSLLYACSHSGLKDKGKEYFELMMHKYGFKPTLKHYTCMVDLLGRSGCLDEAETLIRSMPIPADAVIWKTLLSACKTHKNAEMAERVAECVLRLDPQDSASYVLLSNIRATTARWIDVSEVRRAMREKRVRKEPGISWVEYKGQVYQELGYLPDTSTVFHDMEEEEKETSLAHHNEKLAIAFAILSLPVGVPIRIMKNLRVCDDCHEAIKYISKIAEREIVVRDVTRFHHFRDGECSCKGYW