Information report for GSBRNA2T00144433001
Gene Details
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Functional Annotation
- Refseq: XP_022543527.1 — uncharacterized protein LOC111198718 isoform X2
- TrEMBL: A0A3P5YMF5 — A0A3P5YMF5_BRACM; Uncharacterized protein
- STRING: Bra037494.1-P — (Brassica rapa)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brassica oleracea: XP_013597998.1, XP_013609214.1, XP_013609213.1, XP_013625827.1, XP_013625825.1
- Brassica rapa: XP_009151630.1, XP_009111833.1
- Raphanus raphanistrum: RrC9281_p1, RrC25238_p2
Sequences
CDS Sequence:
- >GSBRNA2T00144433001|Brassica_napus|MYB_related|GSBRNA2T00144433001
ATGGCGACCTGCATCAGAAAACCATCACCCAATCCCGAACCACCCCAGCTTCAAACTCCCCGCGCCAGATCTCCTCTCTCCGAGAATCTCTCTCCATCCACCACCACCTTCCCGCGATCTCCTCTCTCCTTCATCTCTCCTCACACCTTATCTCCCTTGAAGCTTAGCTCCCCTAAGCTCGTAACCCCCGCTTCTCTTCGCACTGATGATGACGACGACGAGGATGAGGACATGAGTATCTCATCGGGTTCTGACGCCTTAGGAGGAGTTAACGAATTGCTCTCCGATTACGATCTCGATGATGACGAGGTTGTGAGGCGTTATTACGACGAAGAAGAAGTGTTTGGGCCAACAAAGCCCACCTCGAAATTGAACAGAGGAGTGTTGAATGATATGAATCTGAGAATCGAAGTTCCGTTTGCTAACGGAAGAGTCACAGACGGCGAATCAAGACTACGGAGATTCGCCTTGGCGAATTCGACTCCGGGGAGCTATCTCCGTGATGAGAGGCCGCGTACTCTGAGCTCCAAGGGTTCGGTGTATTGGGAGAGTAATGAAGATATCGGGACCCCAAGTGCACCACCTATAATGGATATTGGAGAAGATGATAACATCGTGGAGTTGGAGAAAGAGATTGAGCAGATTGAAGATGAGATTTGCAGAGAAGCTGGTGTTGAGAGTCATCATCAACAAGTAAACATTGGAGGCTTAGCTGGTGATACTGTTTCTCATTTGTATCCTGAATTTAGTGAAAGTGTGAGGGAGACTCAAAGTGAGGAAGCTGCGCAAATCGAGGACATCAGCTCTGATGAGTTGAATTGCCATAGTATCAGTGGTCAGTATGCTTGGCAAAGTCTTCTGGCATATGATGCTTGCGTAAGACTTTGCTTGTATGCATGGTCAAGGGGTTCTTCTGAGGCACCTGAGTTTCTGCGTGATGAATGTCGTCTTCTCCGTGGTGCATTTGGGTTGCATAAGTTTCTCTTGCAACCTCGGGGTGTTCGATCAACCGAAGAAAGCAAAAATGTGAAAGTAGAGCAAAAGACACCTTTGAAGTCTAAGAACGTGGTCAGAAAGTTGAGAGTGGAAGTGAGGAGACTTCGATTGATACCACAACGCAAACTTAGAGGCATAGATTCGCTGCGGAGTTTAATGAGCACCCCAATGGGGGCAGAGTATTGCCGCCAAGTTTCATCACTTGTGAAGACTGGGATGAGTTCTATCAAGACGGCTACCCTTTCAGCAGTTTCAGAAGAACAATTCTCCTGCTACCTTCAGATGAAGAGCACAGCAGAAGGAGATCAAGTCGAACAAGGATCTTCCGTTTGTTTGCAATCAGGAACTGGAAGTTACCATGTCTTCTTTCCCGAGCCTGAAGGCGACGCTCTTCTGATAGAAGTTCATGATAAGAAAAAATCAGTTCAAGGAAAAGTAACAATTCCAATGGCATCCTTAACTGATAATCCGAATGAAAATGTAAGATGGTGGCCAATATACCATGGTGAACAAGACTGTGTAGGCAAGATCCAGCTCTTCCTTGGTAGCACGACCTCATCCGATGAAGACTGTCACATAAAGAGTGCTCCTGTTGTTGAGACACTAGCATACGATTTGTTACTAGAAGCTGCCACACGTGCCCAAAGATTTCATGCTCAAAACTTAAGACTAAATGGGTCTTGGAAATGGTTGCTGAGTGAATTCGCAGAATATTATGGAGTTTCCGATTCATATACCAAGTTAAGATATCTCTCACATGTAATGAATGTGGCAACTCCTACTAAAACATGCTTACAACTTGTGCATGAGTTACTAGTGCCCATCCTAAGCGCTCGAAGTGACAAGAGCTTGACCAGGCAGGAGAAAAGTATCTTAATGGATTGTGAAATAGAGATAGAAAAACTCTTGGCAAATGTTTTTGAGAACTACAAGTCATTAGATGAAAGCTGCCCTTCAGGGTTGGCACACATATCTGGTCCGGTGCAAGAATCAGCTTCAACAGCACTTGCTCCAGCTGTTCAGATTTTCTGCCTTCTTCATGATATATTGTCTCCCGAAGGACAAGAAATTTTGAAGAATTACCTTAAGACAGCAGCAAAGAAGAGGTGCAGGAAGCACATGGCTGAGACCGATGAATATGTTTCCTCCAACTCTGAAGGTTTTCTTTTGGACTCGGTCACAATTTCTACAGCCTACCATAAAATGAAGAATCTCTGTCTAAACATAAGCAACGAAATAGAGGCTGACATAAAGATTACCAATGAACATGTACTCCCAAGCTCAATCGACCTATCAAACATAGCCGCTGCCGTATACAGTACGCTGCTATGTAACCGGATCAGAGCATTTCTGTCAGCAGTACCACCATCTTGCCCACAGCCTCATGTCAATGAGCTTCTGATAGCAGTTTCCGATTTTGAAAGAAGCCTCGATTCATGGGGAATCAGTCCAGTACACGGTGGTATAGACTCTAGGGGATTATTCCATAACTACATAATGGTTTGGATACATGATATGGAACTCAGGCTACTTGACCGATGCAAAGCAGAGAAGGTTCCCTGGTCTGGTGTAATAACAAACCACTCAACATCACCGTTTGCTGAGGACATGTATGAGAGAATAAAAGATTCTCTTATGGAGTATGAAGTGGTGATTAGTAGATGGCCACAATACACATTGATTTTGGAAAACACTGCCTCAATCATAGAGAGAGCCATTGTTAAATCTCTTGAGAAACAATACAGTGAGATATTGACTCCTTTGAAAGACAGCATTCCAAAGCGACTGAATTTGCATGTTCAGAAGCTGACAAGAAGGCAGTCATCAGCTCTCTACTCTGTTCCGACTCAACTGGGAACTTTTGTCAACACCATAAAGAGAATTCTTGATGTTCTACATCAGAGAGTCGAGGATATTTTGAGACAATGGGCTTCGTGTCTTCCTGTCGTTGAGGATAAGAAGTCACTCTTTGGGGAGCAGATGAACGTAATCACAGTTTTGCTCAGGACAAAATACAGAAACTACATGCAGGCTGCGGTTGATAAACTTGTCAGCAACACGCAATCAAACAAAACCACAAGGCTGAAGAAAATCTTGGAGGAGATAAGAGAAAACGAGAGAGAAGTCGAAGTCCGCGAGCGTATGAGGATGTTATGCTCACAAATCACAGACTCGATCTCAAACATGCACGATGTCTTCACAAGTCAGATATTCGTGGCGTCATGCCGTCTTTTCTGGGATAGAATGGCGCAGGTGGTGTTGAAGTTTCTTGAGGGAAGAAAAGAGAATGAAGTAGGCTACAAAGGCTCTTACTATGCTCTTGGGATAGTGGAAGACACGTTCGCATCAGAGATGCAGAGGCTGCAAGGGAACTCGCTACAGGAGAAAGATATGGAGGCTCCTCGTTCGATGAAAGACCACAGAGTCCTAGACCGTGGAGCTCTGGTTTTGGGAAAGCTTGATGGTGAAGCTAATCAAAGATTTGCCTCTGGAGAGGGCCCCACACACTGTGTTAGTGGTGGTGCTGAAAGAGTTCCAGACACTTTTGATGAAAGAGATGTGCCATCCAAGAAGCGTCATTGTCTTGGGACAAGTGAGACCACTATAGGAGGAGGAGGATCGAACTTGGAAGCTTGTATTGTATGTGACATTTCAGACGAGGGGGTATCTCGTTGTCCTGGGGCTGGCTGTATTCTCTGGTTTCATGGGGAGTGTTTGAATCCTGATGTGGGTAGTAGTGAGGATTTCGCAAAGACCTACTGTCCTTATTGCTGGTTCAGAGTTCTAATGATGAAAGACAAATCAGTGAGGGAGAAGACCGTTGTGGCGGAAAAGGAAGTCTCCAAGTGTCTAAGTAAAGATCATTCAGTGGATGGAACCGACGTTGTGAGGGATCAAGAGTTGGGAGGAGAGAAGGATGTCTGTTCATCTGAAAAGGAACAGTTGCAAGTGGAGAAAGATTCTGATCGATCAAGAGAAGAGGAGATGCCGTTGACTGAAGAAACAGGTTATCAACACCAAGAGGATACAGAAAAGTTTCAAGATGCTGAGGAAGACAAGGATGATGAAGAAACAACAAAAGATCAAACTACAGGTGGTGCAGGGGGAAAGGGAGATGTTTCAGGGGAAGAGCAAGACCAGAGCCAACAGAATGAGAAGCCAAGAAGAAGAAGACGGCAGTTAATATTGACTTGTAGTGAAATCTCATCGGATGAGTCAACAAACGAACGACATGGGGAAGGTGTAACTGAGCAGATAACAGGGGAGATGAAGAATCAACAGAGAAAACATAGCGCAACAACCCAAGTGGCCAAGTCAAAGACAGTGAGGTTGGACATGTCATCTTTGAAGATGGATCAGAGAAAGAGGCTATTTTGGACACCCGAAGAAGAGGAAATGCTCAAGGTGGGAGTTGAGAAGTTTTCAGCAGAAGCAAAGAAGAACATGCCATGGAGGAAAATTCTGGAAATGGGAGCCGAGGTGTTCCACGAAACACGTACTCCCGCTGATCTCAAGGACAAATGGAGAAACAGGATGGGCGTAAGATCAGCGAAAAAGGCAAGCTAG
Protein Sequence:
- >GSBRNA2T00144433001|Brassica_napus|MYB_related|GSBRNA2T00144433001
MATCIRKPSPNPEPPQLQTPRARSPLSENLSPSTTTFPRSPLSFISPHTLSPLKLSSPKLVTPASLRTDDDDDEDEDMSISSGSDALGGVNELLSDYDLDDDEVVRRYYDEEEVFGPTKPTSKLNRGVLNDMNLRIEVPFANGRVTDGESRLRRFALANSTPGSYLRDERPRTLSSKGSVYWESNEDIGTPSAPPIMDIGEDDNIVELEKEIEQIEDEICREAGVESHHQQVNIGGLAGDTVSHLYPEFSESVRETQSEEAAQIEDISSDELNCHSISGQYAWQSLLAYDACVRLCLYAWSRGSSEAPEFLRDECRLLRGAFGLHKFLLQPRGVRSTEESKNVKVEQKTPLKSKNVVRKLRVEVRRLRLIPQRKLRGIDSLRSLMSTPMGAEYCRQVSSLVKTGMSSIKTATLSAVSEEQFSCYLQMKSTAEGDQVEQGSSVCLQSGTGSYHVFFPEPEGDALLIEVHDKKKSVQGKVTIPMASLTDNPNENVRWWPIYHGEQDCVGKIQLFLGSTTSSDEDCHIKSAPVVETLAYDLLLEAATRAQRFHAQNLRLNGSWKWLLSEFAEYYGVSDSYTKLRYLSHVMNVATPTKTCLQLVHELLVPILSARSDKSLTRQEKSILMDCEIEIEKLLANVFENYKSLDESCPSGLAHISGPVQESASTALAPAVQIFCLLHDILSPEGQEILKNYLKTAAKKRCRKHMAETDEYVSSNSEGFLLDSVTISTAYHKMKNLCLNISNEIEADIKITNEHVLPSSIDLSNIAAAVYSTLLCNRIRAFLSAVPPSCPQPHVNELLIAVSDFERSLDSWGISPVHGGIDSRGLFHNYIMVWIHDMELRLLDRCKAEKVPWSGVITNHSTSPFAEDMYERIKDSLMEYEVVISRWPQYTLILENTASIIERAIVKSLEKQYSEILTPLKDSIPKRLNLHVQKLTRRQSSALYSVPTQLGTFVNTIKRILDVLHQRVEDILRQWASCLPVVEDKKSLFGEQMNVITVLLRTKYRNYMQAAVDKLVSNTQSNKTTRLKKILEEIRENEREVEVRERMRMLCSQITDSISNMHDVFTSQIFVASCRLFWDRMAQVVLKFLEGRKENEVGYKGSYYALGIVEDTFASEMQRLQGNSLQEKDMEAPRSMKDHRVLDRGALVLGKLDGEANQRFASGEGPTHCVSGGAERVPDTFDERDVPSKKRHCLGTSETTIGGGGSNLEACIVCDISDEGVSRCPGAGCILWFHGECLNPDVGSSEDFAKTYCPYCWFRVLMMKDKSVREKTVVAEKEVSKCLSKDHSVDGTDVVRDQELGGEKDVCSSEKEQLQVEKDSDRSREEEMPLTEETGYQHQEDTEKFQDAEEDKDDEETTKDQTTGGAGGKGDVSGEEQDQSQQNEKPRRRRRQLILTCSEISSDESTNERHGEGVTEQITGEMKNQQRKHSATTQVAKSKTVRLDMSSLKMDQRKRLFWTPEEEEMLKVGVEKFSAEAKKNMPWRKILEMGAEVFHETRTPADLKDKWRNRMGVRSAKKAS*