Information report for GSBRNA2T00109227001
Gene Details
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Functional Annotation
- Refseq: XP_013663146.1 — uncharacterized protein LOC106367835
- TrEMBL: A0A3N6PNK1 — A0A3N6PNK1_BRACR; Uncharacterized protein
- STRING: Bo8g080840.1 — (Brassica oleracea)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT3G52250.1
- Brassica oleracea: XP_013604238.1, Bo8g080840, XP_013597447.1, Bo7g101470, XP_013597448.1
- Brassica rapa: XP_009115935.1, Bra006915, XP_009136665.1, Bra012815
Sequences
CDS Sequence:
- >GSBRNA2T00109227001|Brassica_napus|MYB_related|GSBRNA2T00109227001
ATGCCGCCGCAGGATCACTCATCTTGGGATCGGAAGGATCTTCTGAGGCAGAGGAAGCACGAGAGACCCTCCGAGCCGCCTTTCGATCCTCCTCCTTTCAGGTGGAGGGATTCTCCTTCTTCTTCTTCTTCTCACCGCGAGTTTTCACGGTGGGGAGGATCTGCCGACTTCCGCAGGCCTTCTTCTCATGGTAAGCAGGGCGGAAGGTACCAGTTTGTGGAGGAGTCTAGTCATGGCTACACATCTTCTCGGTCCAGTGCCCGGATGTTTGAGAATGACTACTACAGACCATCAGCACCACGTGGAGACTGGCGATACACCAGGAATTGCAGGGATGATAGAGTTCCTTTAAGCCAGAAGGACTGGAGGTCCAATACATGGGAGATGAACAACGGATCTTATAGAGCTTTTGATAGGCCATGTGGTGTTAGAAATGGTCGAAGGTCGGTTGAGGAGAGGCCACCACCTGCTTCAGATACTCATACCACTGTGGTGAACTCTTGGGAACAACCCAACTCCGCTCAGCAGATGGATATTGAGCTGTGCACCCCTGTTCGGACAGTTAGATCTAAGAACGAGCAGAAATTTTTGGATCAAAGGCAATCACTTCCTTCAGATCCTCATTCTGACGGTCTTGGCTTGTTTGATCGGCCCTCTTCGGTGAACAGTTATGAAAACAAGGAGTGTTCTCCAGCAAAGCAATCCAATGGTTTGATGCGCGGTCGAAGGCTAGCTGATGATAATTCATTAGATCCTCCAATCCTCAATGCAGAGATAGAGGGAACTCGGAATCAGATTCTCCTGAAAGACATGCACGATAATAAGTTACATGGGGTTAGTGATTTAGACGGTGTCAGGGAAAATGGGAAGGAGAATTCTCTGGGAGCAACTGGGAAGCTTCCAATGTGGACCCGTTCTGGGAGTTTTGCGTCTCAGAGTTCAGGTTTTAGTCACTCAAGTAGCTTGAAAAGCTTGGGGGCTGTTGATTCCAGTGATGGAAAACATAAGATCCTTCCTAAAACTGTTGCTGTGACTCAAACTTCTTCAGGAGATGCTACTGCATGTGCCAAAACTACTGTGTCTGAGGAGATGAGTTCTAGAAAGAAACAACGTCTTGGGTGGGGTGAGGGCCTGGCGAAATACGAGAATAAGAAAGTTGATGTTAACACAACCGAGGATGGAACAGACTTGTTGGAGAACAGTGCAGAAGAAATGCATTCTTTGAACAAAAATATTGCTGATAAAAGTCCTACAGCAACCAATGCTCCAGATTATGGTTCCCCTACAACTCCATCCTCTGTAGCTTGCAATTCATCACCAGATAAGTCATCTGCGAAGGCTGCTATTGGTGCTAGTGATGTCAGTAACATGTGCCGTTCACCTAGTCCCGTGTCTAGTATTCACCTTGAACGACTTCCAATCAATATAGAGGAGCTTGATAACATCTCAATGGAGCGAGTTGGCTGTTTGCTCAATGAATTGCTTGGTACTGATGATCCTGGTACAGGGGATTCCAGTTCCGTCCAGTTGACGTCAATGAAAAAATTACTTGCCTGGAAAGGTGATATTTTGAAAGCTGTGGAGATGGCTGAATCTGAAATTGATCTGCTTGAAAGCAAACAAAGGGCTCTGAAGCTTGAATGTGGAAGACAGTGCCGTGTTGTTGGACCCAGTTCCGACCTTCCCGAGGGAGACGAAAATGTGCAGCAGGAAGCTTCTTGTGTATTGGGTCTCAAAGCAGTAGCTTTCTCTGTGGCTCAAACATTGGTGAGAGATACTGTTCATCAAGCTGTTTCAGCCAAGGTTCCTGTTAGAATCATTGAAGATAGTTGTCGAGAAGTTAATGCTCTACCCCAGTTTCTTGCCACTGTCGGAAGCAATGAAGATATATTGCCCATACCGTCTACCAAGGCAGATTCCAATCAGGAAACTGTTGACCTGTCTTCTGCTGATGATAGCATGGTCTCTGATGAAGACTTGCTCTGTGCTAAGTTATTATCTACCAATAAGATATATGCCAGTGAATCATCTCAAGTATTTAATAAATTGCTCCCAAGAGATTTCAGTTCGTTTGATGAGTCAAGATTGCCTGGCAGATGTCAAAGGCAGTTTGATTCTCATGTCAAAGAAAAAATTGCGGAAAGGATAGAGGTCTTGAGAGCTAGGGAGAAAATTTTGCTCCTTCAGTTTAAAGCGTTTCAGCTCGCATGGAAGAAAGATGTGCGTCAACTAGCTTCAGCAAAGTACCAACCCAAGGGTAACAAAAAAACAGAAGTATTTCCCTATGCAAAAAATGGTGGGCATCTGAAGCTTTCCCAACCTGTACGCCTGAGACTCTATTCTTCAGCTCAAAGAAGGGATAGTGTAGCCTCCACGACAGAGCTCGTAAGTTACATGAAAAAGCTACTAAAAAATACCCGTCTAAAGCCTTTTAGAGACATTTTGAGAATGCCTGCGATGATATTGGATGAGAAAGAAAGAGTGAGGTCGCGGTTTATCTCTAGCAATGGGCTGATTGAAGATCCATGCGACGTTGAGAAGGAAAGAACAATGATTAATCCTTGGACCTCAGAGGAGAAAGAGACTTTCCTTAGTATGCTAGCAATGCACGGGAAGGATTTCAAGAAAATTGCTTCATTTCTTACTCAGAAGACAACTGCGGACTGTATTGATTACTACTACAAAAACCACAAGTCCGATTGTTTTGCGAAAATTAAGAAGCAGCGTAGTTTTGGTAAAGAAGGGAAACACACCTACATGTTGGCGCCAACAAAAAAGTGGAAACGTGAGATGGGGGCTGCCTCTCTTGATATTTTAGGTGCTGTCTCCATTATTGCAGCAAACGCAGGCAAGGTTGCATCAACCCGGCAGACTTCTTCCAAAAGGATCACCCTTAGAGGTTGCAGCAGTTCTAGTTCGTTGCAGCGCGATGGCAATTACTCTGAAGGGTACTCCCACAGTTTCGATTTCCCTCGTAAGAGAACTCTTGGTGCAGATGTTGTAGCTGTTGGTCCTTTGTCATCAGAGCAGATTAATTCCTGCTTAAGGACTTCCGTGAACTCTAGAGAGGGGTGTATGGATCATTTGAAGTTTGCTCCTGCTGCAAAGAAACCTCGGATATCTCATACTACACATAATGAGAACAGCAATGAAGACGATGACTCATGTTCAGAAGAGAGCTGCGGGGAAACGGGGCCTATTCATTGGACCGATGCTGAGAGATCTGCCTTTATACAGGGTTTCTCTTTATTTGGCAAGAATTTTGCTTCATTATCGAGGTTTGTCAGGACCAGGTCTCCGGATCAGTGTAGGGTTTTCTTTAGCAAAGTTCGGAAATGCCTTGGGCTGGAATGTATACAGTCTGGATCTAGAAATGTGAGTGCATCTGCAAGTGTTGATAATGCCAATGAGGGTGGTGGAAGCGACTTGGATGGTCCTTGTGCTACGGAGAGTAACTCTGGCATATGCAATAATGGAGTTAGTAGCAAGATTGGTTTGAATACGCTTACCTCACCTCTTAACATGAATCAGGAGGGAGCTAACCATTCAGGCTTTGAAAATGTGGAAGCCGGCCTTAGTAGATCAGAACAGGAGAATGGGCTGGCATTATTGCGTTTGAAAGATGGTACCAATCTCGTGAGCACTGCAAATATCAATGGGGATTCGGAACCTTGCAGAGATTTGGTAGACATTAACACTGTTGAGAGCCACTGTCAGGCTGCAGACCAAATGAACAGCAATGATAGCAGTGATCAACTGTCAATGGAAATAGATGAAGGTAACTTAACACCCATCGCTGTATCTTCTGACCCCTTGTATTGTGGGTCAATCGTTCTTTCCAATAATATTGTGGAGAAGGGCTCAGGATGTGAAGGTGCTGTGGTGCCTAAACAAAGTTCAAAGATGCAGGATGGAGTGATGCAAGCTGTAAACAGAACCAGAAATTCCGGCCTTGAGGCTGAAGCTGCGTCTTCAAGTTTCAGGTATCCCGAGTGTCTGCACCATGTTCCAATTGAGGAAGACCTTGTAGGCGTCAGTGTACCACAAGGAGATTCCAATTGCCATATAGAGTCCGAGTTGCCAAATCCTCTTGTTGTGCAAACAAATAACATGGGCTGGCAGTTTTCTGAGGTCAATCTGGATTTTGATAGGAGAAGTCAGGTTTTGGGCCATGTCAAACCTGAGCAGAACGGTCAATTACATGCGACCAGTACGGAATCTTGTCAAATTCCGTGGATATCATTCACGCAAGATCCGAGCAGGATAATTAGGTCAAAATCTGATTTGATTGTGAAGGCTCAACGTACAGGTGAAGCTTTCTCACTCAAAAAGTGTACTAGCTCAGCTACTAAGCCTCTGACAGTGTTCCAAAAGGATGGAAGATCTGGTCACAGCAGGAGCCATTCATTTAGTTTGTCTGATACAAAGAGGCTCGATAAGAATGGAGATGTGAAGCTGTTTGGCACAGTACTAACCGCTGATGAGAATGGAAGCAAGCAAAAACACAATCCAGGAGGAAGTATCAGGCCATCATCAACCTTGAGCAGGGACCATGAGACAGGACATCAGTACATTAATCAGCAGCACCTTCAAAATGTTCCTATTACGAGCTATGGTTTCTGGGATGGCAACAGAATCCAAACCGGGCTCACATCTTTGCCAGAGTCTGCCAAGTTGGTTGCAAGTTACCCCGAAGCACTTACCACACATCAGAAGCAGCAAGTTGTTAGTACCAAAGAGATTCAGCTGGATGTCAGTGGGATTCTGAGCTTTGGGAAGCAAATCGAAGATAGATCAGAGGTCTCGAGTGGTAAGGATAAAGGTAAGATAGGAGGAGAGGTAAATGGTGTAGCAGAAGCAGCAACGTGA
Protein Sequence:
- >GSBRNA2T00109227001|Brassica_napus|MYB_related|GSBRNA2T00109227001
MPPQDHSSWDRKDLLRQRKHERPSEPPFDPPPFRWRDSPSSSSSHREFSRWGGSADFRRPSSHGKQGGRYQFVEESSHGYTSSRSSARMFENDYYRPSAPRGDWRYTRNCRDDRVPLSQKDWRSNTWEMNNGSYRAFDRPCGVRNGRRSVEERPPPASDTHTTVVNSWEQPNSAQQMDIELCTPVRTVRSKNEQKFLDQRQSLPSDPHSDGLGLFDRPSSVNSYENKECSPAKQSNGLMRGRRLADDNSLDPPILNAEIEGTRNQILLKDMHDNKLHGVSDLDGVRENGKENSLGATGKLPMWTRSGSFASQSSGFSHSSSLKSLGAVDSSDGKHKILPKTVAVTQTSSGDATACAKTTVSEEMSSRKKQRLGWGEGLAKYENKKVDVNTTEDGTDLLENSAEEMHSLNKNIADKSPTATNAPDYGSPTTPSSVACNSSPDKSSAKAAIGASDVSNMCRSPSPVSSIHLERLPINIEELDNISMERVGCLLNELLGTDDPGTGDSSSVQLTSMKKLLAWKGDILKAVEMAESEIDLLESKQRALKLECGRQCRVVGPSSDLPEGDENVQQEASCVLGLKAVAFSVAQTLVRDTVHQAVSAKVPVRIIEDSCREVNALPQFLATVGSNEDILPIPSTKADSNQETVDLSSADDSMVSDEDLLCAKLLSTNKIYASESSQVFNKLLPRDFSSFDESRLPGRCQRQFDSHVKEKIAERIEVLRAREKILLLQFKAFQLAWKKDVRQLASAKYQPKGNKKTEVFPYAKNGGHLKLSQPVRLRLYSSAQRRDSVASTTELVSYMKKLLKNTRLKPFRDILRMPAMILDEKERVRSRFISSNGLIEDPCDVEKERTMINPWTSEEKETFLSMLAMHGKDFKKIASFLTQKTTADCIDYYYKNHKSDCFAKIKKQRSFGKEGKHTYMLAPTKKWKREMGAASLDILGAVSIIAANAGKVASTRQTSSKRITLRGCSSSSSLQRDGNYSEGYSHSFDFPRKRTLGADVVAVGPLSSEQINSCLRTSVNSREGCMDHLKFAPAAKKPRISHTTHNENSNEDDDSCSEESCGETGPIHWTDAERSAFIQGFSLFGKNFASLSRFVRTRSPDQCRVFFSKVRKCLGLECIQSGSRNVSASASVDNANEGGGSDLDGPCATESNSGICNNGVSSKIGLNTLTSPLNMNQEGANHSGFENVEAGLSRSEQENGLALLRLKDGTNLVSTANINGDSEPCRDLVDINTVESHCQAADQMNSNDSSDQLSMEIDEGNLTPIAVSSDPLYCGSIVLSNNIVEKGSGCEGAVVPKQSSKMQDGVMQAVNRTRNSGLEAEAASSSFRYPECLHHVPIEEDLVGVSVPQGDSNCHIESELPNPLVVQTNNMGWQFSEVNLDFDRRSQVLGHVKPEQNGQLHATSTESCQIPWISFTQDPSRIIRSKSDLIVKAQRTGEAFSLKKCTSSATKPLTVFQKDGRSGHSRSHSFSLSDTKRLDKNGDVKLFGTVLTADENGSKQKHNPGGSIRPSSTLSRDHETGHQYINQQHLQNVPITSYGFWDGNRIQTGLTSLPESAKLVASYPEALTTHQKQQVVSTKEIQLDVSGILSFGKQIEDRSEVSSGKDKGKIGGEVNGVAEAAT*