Information report for GSBRNA2T00073198001
Gene Details
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Functional Annotation
- Refseq: XP_013712324.1 — protein CCA1-like isoform X1
- Refseq: XP_013712325.1 — protein CCA1-like isoform X1
- Swissprot: P92973 — CCA1_ARATH; Protein CCA1
- TrEMBL: A0A078HXW3 — A0A078HXW3_BRANA; BnaC04g00590D protein
- STRING: Bo4g006930.1 — (Brassica oleracea)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0006796 — Biological Process — phosphate-containing compound metabolic process
- GO:0005634 — Cellular Component — nucleus
- GO:0005739 — Cellular Component — mitochondrion
- GO:0000287 — Molecular Function — magnesium ion binding
- GO:0003677 — Molecular Function — DNA binding
- GO:0004427 — Molecular Function — inorganic diphosphatase activity
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >GSBRNA2T00073198001|Brassica_napus|MYB_related|GSBRNA2T00073198001
ATGGAGACAAATTCGTCTGGAGAAGATCTGGTTGTTAAGACGAGGAAGCCGTATACGATAACAAAGCAACGTGAAAGATGGACTGAGGAAGAACATAATAGGTTCCTTGATGCCTTGAGGCTTTACGGTAGAGCCTGGCAAAAGATAGAAGAACATGTAGCAACGAAAACTGCTGTGCAGATTAGAAGCCATGCTCAGAAATTTTTCTCCAAGGTAGAGAAAGAGGCTGAAGCTAAAGGTGTACCAGTGGCTCAAGCGCTAGACATAGCTATCCCTCCTCCACGCCCTAAACGTAAACCAAACAACCCTTATCCTAGAAAGACCGGAACTGGATCTCTCCCCATCTCTAAAACGGGTCTGAACGATGGAAAAGAGTCCCTTGGATCAGCAAAAGTTTCCCTTCCTGAGACGACCAATGAAGACAACTGCTCAGACTGTCTCACTCATCAACACCTCTCTGCTGCATCAAACGCAAGCACTTTCCGGGAGTTCTTACCTTCACGGGAACAGGAACAGGGGAATAACAAGGAGTCAAACTACAGTGATTTGAATATAGAGGCAGGAGGACCTCACACTTATCCAACGCCTATCCCTCTGCTAGTTCCATTGGGGACAAGGTCTCTATCACATGCTCCTACTTCACAGCCAGACGAGAATAGTCATCAGTCCTTTCCTGAACATATCATGTCGACCCTTTTACAAACACCAGCTCTCTATACAGCTGCCTCTTTCGCCTCAACGTTTGGTGGCGGCCCACAAGGGAACTTGGCTGCCATGGCTGCAGCCACCGTTGCAGCTGCAAGTGCTTGGTGGGCCGCCAATGGGATGCTCCCTCTCTGCGCTCCTCCTTTTAGTTCAGGCAACCCTCCAACTACTTATGAAGTAAACGCCCTCACAAAAACAGTGGATCAAGAACACTCCGAGGCTTCGAAGGCTAGATCTTCGTTGGAATCAGAGGAGACTAGAAATGGGAGTAAACCAGATTGTCATCATCATACTTGTGCAGCGACTGAGACTGATGCAAAGGGATCAGATGGAGCGAGAGACAGGAAACAAGTTGACAGGTCTTCTTGTGGCTCGAACACTCCTTCGAGTAGTGATGATGTTGAGGCGGATGCTTTGGTGGAGAGGCAAGAGAACGGTGGTAAAAATGATGAGGAAGTGAAAGAAGTGGATGGGGACACTACTAACAACCCACAAACTTCAGAATCTAATGCGCGACGCAGTAGAATCAGTAGCTCTATCTTAGCTGATCCATGGAAGGCTGTTTCTGATGAGGGACGAATTGCTTTTAGAGCTCTGTTTGCAAGAGAAGTTTTGCCACAAAGTTTTACATATCAGAGAGAGGAGGGTCAACAACAAAGATATCCAATGGAGCTTGATCTTAACTCCACGGCTGATGATCAAGAAGAGAACAGAAACATAGCGTTTTTGGGTGCTTCAAAGCAGCAGCTAAGTAGAGGAAGGACAGGTTTCAAGCCTTACAAAAGATGTTCAATGGAAGCCAAAGAAGGTAGAGTCATCAACAACACCAATCCTATCATCAGTGTTGAACAGAAAGATCCTAAGCGGATTAGATCTCAACATGTAAGACATGATGATCAACAGATGAGTGAAGAAACATATGAAGAAACGATGGAATCAAATGAGTCTCCTCGTCCTGCTCCAAAACTCAACGAGAGGATTCTCTCTACTCTCTCCAAGAGATCTGTAGCTGCACATCCATGGCACGACCTTGAGATCGGTCCTGAGGCTCCATTGGTCTTCAATGTGGTGGTTGAGATCACGAAGGGAAGCAAAGTGAAATATGAACTTGACAAAAAGACCGGTCTTATCAAGGTTGACCGGATCTTGTACTCATCGGTTGTTTATCCTCACAACTATGGATTCATCCCAAGGACATTGTGTGAAGACAACGATCCTCTTGATGTTCTTGTCCTCATGCAGGAACCAGTGCTTCCAGGATGTTTTCTCCGTGCTAGAGCCATTGGATTAATGCCCATGATTGATCAGGGAGAGATGGACGACAAGATCATTGCCGTGTGTGCTGATGATCCAGAGTACAAACATTTCACTGACATCAAACAACTCGCTCCTCACCGTCTCTCAGAGATCCGTCGTTTCTTCGAAGACTACAAGAAGAACGAGCACAAGGAGGTGGCTGTAAACGATTTCTTGCCATCGGAGAAGGCACATGAAGCAATCCAGTACTCCATGGACCTATACGCTGAGTATATTCTCCATAGCTTGAGGAGATGA
Protein Sequence:
- >GSBRNA2T00073198001|Brassica_napus|MYB_related|GSBRNA2T00073198001
METNSSGEDLVVKTRKPYTITKQRERWTEEEHNRFLDALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKVEKEAEAKGVPVAQALDIAIPPPRPKRKPNNPYPRKTGTGSLPISKTGLNDGKESLGSAKVSLPETTNEDNCSDCLTHQHLSAASNASTFREFLPSREQEQGNNKESNYSDLNIEAGGPHTYPTPIPLLVPLGTRSLSHAPTSQPDENSHQSFPEHIMSTLLQTPALYTAASFASTFGGGPQGNLAAMAAATVAAASAWWAANGMLPLCAPPFSSGNPPTTYEVNALTKTVDQEHSEASKARSSLESEETRNGSKPDCHHHTCAATETDAKGSDGARDRKQVDRSSCGSNTPSSSDDVEADALVERQENGGKNDEEVKEVDGDTTNNPQTSESNARRSRISSSILADPWKAVSDEGRIAFRALFAREVLPQSFTYQREEGQQQRYPMELDLNSTADDQEENRNIAFLGASKQQLSRGRTGFKPYKRCSMEAKEGRVINNTNPIISVEQKDPKRIRSQHVRHDDQQMSEETYEETMESNESPRPAPKLNERILSTLSKRSVAAHPWHDLEIGPEAPLVFNVVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEMDDKIIAVCADDPEYKHFTDIKQLAPHRLSEIRRFFEDYKKNEHKEVAVNDFLPSEKAHEAIQYSMDLYAEYILHSLRR*