Gene Details:
- Gene ID: GSBRNA2T00065061001
- Gene Name: GSBRNA2T00065061001, LOC106381754
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Brassica napus
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_009118810.1 — PREDICTED: MYB-like transcription factor ETC1
- Refseq: XP_013603708.1 — PREDICTED: MYB-like transcription factor ETC1
- Refseq: XP_013677149.1 — MYB-like transcription factor ETC1
- Swissprot: Q9LNI5 — ETC1_ARATH; MYB-like transcription factor ETC1
- TrEMBL: A0A078HK25 — A0A078HK25_BRANA; BnaCnng08670D protein
- TrEMBL: A0A0D3DZE0 — A0A0D3DZE0_BRAOL; Uncharacterized protein
- TrEMBL: A0A397Y6C7 — A0A397Y6C7_BRACM; Uncharacterized protein
- TrEMBL: A0A3P6GIS8 — A0A3P6GIS8_BRAOL; Uncharacterized protein
- TrEMBL: M4EV02 — M4EV02_BRARP; Uncharacterized protein
- STRING: Bra032635.1-P — (Brassica rapa)
- STRING: Bo8g117860.1 — (Brassica oleracea)
Gene Ontology:
- GO:0003677 — Molecular Function — DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >GSBRNA2T00065061001|Brassica_napus|MYB_related|GSBRNA2T00065061001
ATGGATAAGCAGCGTAAGTCGAAGCATCCCAAGACCAATGCTTATGCCACCATTGTTTCCTCTTCTTCGGAAGAAGTGAGCAGTCTTGAGTGGGAAGAAATAGCAATGACACAAGAAGAAGAGGATTTGATCTGCAGGATGTATAAGCTTGTCGGCGAAAGGTGGGATTTAATAGCTGGGAGGATTCCAGGAAGAACGGCACAAGTGATCGAGAGGTTTTGGGTCATGAAGAATCATCGAAGAGCTTGA
Protein Sequence:
- >GSBRNA2T00065061001|Brassica_napus|MYB_related|GSBRNA2T00065061001
MDKQRKSKHPKTNAYATIVSSSSEEVSSLEWEEIAMTQEEEDLICRMYKLVGERWDLIAGRIPGRTAQVIERFWVMKNHRRA*