Information report for GSBRNA2T00038579001
Gene Details
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Functional Annotation
- Refseq: XP_018514552.1 — PREDICTED: protein ALWAYS EARLY 2
- Swissprot: Q6A333 — ALY2_ARATH; Protein ALWAYS EARLY 2
- TrEMBL: A0A078GT43 — A0A078GT43_BRANA; BnaA05g31820D protein
- STRING: Bra039443.1-P — (Brassica rapa)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT3G05380
- Brassica oleracea: XP_013598393.1, XP_013616256.1
- Brassica rapa: XP_009147247.1, XP_009151196.1, XP_009151195.1, XP_009129869.1
- Ricinus communis: 30128.m008784
Sequences
CDS Sequence:
- >GSBRNA2T00038579001|Brassica_napus|MYB_related|GSBRNA2T00038579001
ATGGCACCGGCGGTTAGGAAGTCGAGGAGTGTGAACAAGCGTTTCACCAACGAACCCTCGCCGAGAAAGGATGCTGGGAGCTCCAGAAAAAATAAGCAGCGTAAGACGAAATTTTCTGATAAACTGGGACCTCAGTGGACTAAAGCAGAGCTTGAGCGTTTCTATGACTACTACCGAAAGTACGGACAGGACTGGAGAAAGGTGGCTGCTGCTATTCGGAATAGCAGGTCTGTTGACATGGTGGAAGCTCTTTTTAACATGAATAAGGCTTATTTATCTCTTCCGGAAGGAACTGCCTCTGTAGCTGGCCTTATTGCTATGATGACCGATCATTACACTGTCATGGAAGGGAGTGGCAGTGAAGGAGAAGGCCATGATGTACCAGAAGCACCGAGGAAACAGCAAAAGCGCAAACGCCCAAAACCTCAGCTTAGTGATTCTCGAGAGGAAGATGATACGCAACATCCCGTTGCTTCAACTGATGGATGTCTCAAGTTTTTGAAACAAGCACGAGCTAATGGAACTCATCGACGTGCCACTGGCAAACGTACACCTCGGGTTCCTGTACAGACTTCACGGGATGATGGGGAAGGCGCTACTCCACGAAATAAAAGAGCCAGAAAGCAACTTGATGCCAATGATGATGTTGCTGCACATTTTTTAGGATTGACGTTAACAGACGCATCCAGAAGGGAAGGGTCTCCACAAGTGTCTGAATCACCTAATAAAAGAACAGAACCCAGCGACAACTCGCCAATAAAGAGCTGGGGGAAAATGTCGCGAACGAGGAAAGCTAGCCGAGAAAAGAAGCTTGAATCTGATAGAGAGGATGTGGAAGGAGTTGGCGAAATGGAGGCTCCACGGAAGGTTAAAAGGGTCTACAAGAAAAGAGTCAAAGTCGAAGAAGCCGAGTGTAATGATTCTGATGACAACGGTGGGGCATGCAGTGCCACTGAGGGGAGCAGGATTAAATCAAAGAGACGAAAGGCAGGTGTTGGTGCCTCAAGAGGGACATATTCACCGCGCAGCCCAAAAGAAAAGGACAACAAATTTACTTCCGGAGATGAATTTGATGCTCTGCAAGCCTTAGCTGATTTGTCAGCTTCATTGCTTCCGGGAGCTTTGATGGAATCAGAATCTTCTGCTCAGTTGAAGGAAGAGAGAATAGAAAACGACATGGACGAGAAATCTAGCTCACCAGATGATAGTCATGGGGAAAAAGCAGATTCAGAACCAGATGATAGTCTCCTTCATGCAATTTCTGCTATTGGGAACGTTGCTTACAGTAGAAAACCAAAATCTTCAAGGCAACTATCCACTGATTGTAACGCTGTTCCCACGGAGAAGCCTGAACCGGAGCCTACTAGTGGCAGTTCAAAAAGAAAACGGAAACCAAAGAAGCTATGGGATGAAACTCCACATGAATCTACTCGGAAGAAATCCACAAACAAGCAGAAGGAATTGGCTCAAGAAGACGTTAATATGAAGTCTTCGCTTAGAACTAAACGCTCTGGTCAAGTCCTCCCCCCACAGTCAAAACAGTTGAAAGTTGCTAAGGAGTTGGAGGAAGCTACTACAACGAGCGATAAGAAAAGATCTGCGATGGATGTAGTAGAAGTGGCAACAACTAAAGAAGTTTCTGATTCGGGTCCAGCCAGTTTACCGCAGAAGCCTCCTAACAGGCGTAAGATGAGTCTGAAGAAAAGCTTACAGGAAAGGGATAATAAATCTTCTGAAACCATTCATAAAGCTTCTCGTAGCTCAAGATCTCTTTCAGAACATGAGTTGCTATTAAAGGATAAGCTTTCTACTTCCCTATCGCATCCCTTGGCACGTCGAAGGTGCATGTTCGAATGGTTTTATAGTGCCATCGACCATCCCTGGTTTGCAAAGATGGAGTTTGTCGATTACCTAAATCACGTAGGACTTGGTCACATTCCTAGACTTACTCGTCTTGAGTGGAGCGTCATTAAAAGCTCTCTTGGTAGACCGCGAAGATTCTCCGAGAGATTTTTACAGGAGGAGAGGGAGAAACTCAAACAGTACCGTGAGTCTGTGAGAAAGCATTACACAGAGCTTCGAACAGGTGCAAGGGAAGGGCTTCCTACAGATTTGGCTCGGCCATTAGCAGTTGGGAATAGAGTCATTGCCATCCATCCCAAAACACGAGAGATTCATGATGGGAAGATCCTCACTGTTGACCATAGCCAATGCAACGTTCTGTTCGACGACGTGGGCGTTGAGTTAGTTAAAGACATTGATTGTATGCCTTTAAATCCGTTGGAATACATGCCAGAGGGTCTGAGGAGGCAAGTTGATAAGTGCTTGTCCATAAAGAAAGAAGCACAGCTAAGTGGTGTGTCTGTTATATTCCCTCCATGCGGACTTGAGAATATCGACTTCTCCATGAATCAATCTCTGAACCAGGGTGATATGATTGCTCCCATTCTACATGGTAAAGTGTTAACAAACACTAGTAGTAGCCCACATCAGACCAATCAGTCACATATCATAAATTATAGCAAAGGGCGAGAAGCTGAGATTCAACGAGTACTTGCACTACAGCATGCTTTAGATGAAAAGGAAATGGAGCCTGAGATGGTAGAGATTGTCAAGGGTTCAAAAACAAGAGCACAAGCAATGGTGGATGCAGCTATCAAGGCTGCATCATCTGTGAAGGAAGGAGAAGATGCCATCAAAATGATTCAAGAAGCCTTGGACATGGTTGGCAAACATCAGCCGTTGCGCAGCTCTGTGGTCAAACATGAAGAGCATGCAAACGGCGGCGTAGAGCATCATCAAAACCCATCTCTCTCCTCAGACGCATCAAAGCCTATGGCTAACAACGATTTCATCTCGCAAGATGGTTCATCAGAGAAAAACGAGGTTCAAATGCCTGCAGAGCTAATCACATCGTGTGTTGCCTCTTGGCTCATGATTCAGATGTGCACAGAGAGGCAGTACCCTCCAGCTGAAGTGGCACAGCTTATAGACACAGCAGTTACAAGCTTGCAGCCTCGATGCCCCCAGAACCTACCGATCTACAGAGAAATCCAAATGTGTATGGGACGAATCAAGACTCAAATCCTCTCTCTAGTACCAAGTTGA
Protein Sequence:
- >GSBRNA2T00038579001|Brassica_napus|MYB_related|GSBRNA2T00038579001
MAPAVRKSRSVNKRFTNEPSPRKDAGSSRKNKQRKTKFSDKLGPQWTKAELERFYDYYRKYGQDWRKVAAAIRNSRSVDMVEALFNMNKAYLSLPEGTASVAGLIAMMTDHYTVMEGSGSEGEGHDVPEAPRKQQKRKRPKPQLSDSREEDDTQHPVASTDGCLKFLKQARANGTHRRATGKRTPRVPVQTSRDDGEGATPRNKRARKQLDANDDVAAHFLGLTLTDASRREGSPQVSESPNKRTEPSDNSPIKSWGKMSRTRKASREKKLESDREDVEGVGEMEAPRKVKRVYKKRVKVEEAECNDSDDNGGACSATEGSRIKSKRRKAGVGASRGTYSPRSPKEKDNKFTSGDEFDALQALADLSASLLPGALMESESSAQLKEERIENDMDEKSSSPDDSHGEKADSEPDDSLLHAISAIGNVAYSRKPKSSRQLSTDCNAVPTEKPEPEPTSGSSKRKRKPKKLWDETPHESTRKKSTNKQKELAQEDVNMKSSLRTKRSGQVLPPQSKQLKVAKELEEATTTSDKKRSAMDVVEVATTKEVSDSGPASLPQKPPNRRKMSLKKSLQERDNKSSETIHKASRSSRSLSEHELLLKDKLSTSLSHPLARRRCMFEWFYSAIDHPWFAKMEFVDYLNHVGLGHIPRLTRLEWSVIKSSLGRPRRFSERFLQEEREKLKQYRESVRKHYTELRTGAREGLPTDLARPLAVGNRVIAIHPKTREIHDGKILTVDHSQCNVLFDDVGVELVKDIDCMPLNPLEYMPEGLRRQVDKCLSIKKEAQLSGVSVIFPPCGLENIDFSMNQSLNQGDMIAPILHGKVLTNTSSSPHQTNQSHIINYSKGREAEIQRVLALQHALDEKEMEPEMVEIVKGSKTRAQAMVDAAIKAASSVKEGEDAIKMIQEALDMVGKHQPLRSSVVKHEEHANGGVEHHQNPSLSSDASKPMANNDFISQDGSSEKNEVQMPAELITSCVASWLMIQMCTERQYPPAEVAQLIDTAVTSLQPRCPQNLPIYREIQMCMGRIKTQILSLVPS*