Gene Details:
- Gene ID: Gorai.008G147400.4
- Gene Name: B456_008G147400
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Gossypium raimondii
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_012438079.1 — PREDICTED: transcription factor DIVARICATA-like
- Refseq: XP_012438080.1 — PREDICTED: transcription factor DIVARICATA-like
- Refseq: XP_012438081.1 — PREDICTED: transcription factor DIVARICATA-like
- Refseq: XP_012438082.1 — PREDICTED: transcription factor DIVARICATA-like
- Refseq: XP_012438083.1 — PREDICTED: transcription factor DIVARICATA-like
- Swissprot: Q9FNN6 — SRM1_ARATH; Transcription factor SRM1
- TrEMBL: A0A0D2U3D8 — A0A0D2U3D8_GOSRA; Uncharacterized protein
- STRING: Gorai.008G147400.1 — (Gossypium raimondii)
Gene Ontology:
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >Gorai.008G147400.4|Gossypium_raimondii|MYB_related|Gorai.008G147400.4
ATGAAGCTAGCAACAGCTCCGAGTGGAGTAGAGAGCAAGATAAGGCATTTGAGAATGCCCTTGCAACATATCCTGAGGACACCTCAGATCGGTGGGAGAAAATCGCGGCTGATTTCTTCTGAGGGTTCAACATGCCATGCTGGTGATGAAGTAACTAGCAAGAAAGGAAGCGACCATTTAGGGCATTTTAATAGTGAGTCAGATCATGGGAGTAAGAATTCAAGGTCAGACCAGGAACGTCGTAAGGGGATTGCTTGGACAGAGGATGAGCACAGGTTATTTCTTCTTGGTTTGGAAAAATATGGGAAAGGTGACTGGCGAAGCATATCCCGGAACTTTGTGGTCACAAGAACGCCAACACAAGTTGCAAGTCACGCGCAAAAATATTTCATTCGCTTAAACTCCATTAACAAAGATAGGAGGCGATCTAGCATCCATGATATTACTAGCGTGGGCAATGGAGAGATTCTAGCAACCCAAGGACCAATCACTGGTGAACCGAATGGTGCAGCAACTGGAGGTTCCTCCGCAAAATCAGCCAAACAACCCTCTCAGCTTCCTGCTGCACCACCAGGTGTTGGCATGTATTCTTCTCCAACTATAGGGCAGCCAATAGGAGGGCCCCTTGTCTCAACAGTTGGCACGCCAGTTAATCTTCCTGCCCCGCCACATCTAGCTTATGGAGCAGTGGTTCCTAGTGCACCGATGAACATGGGTCCTGTCAAATACTCAATGCCTCATAAATCTGATCATAGGTAA
Protein Sequence:
- >Gorai.008G147400.4|Gossypium_raimondii|MYB_related|Gorai.008G147400.4
MKLATAPSGVESKIRHLRMPLQHILRTPQIGGRKSRLISSEGSTCHAGDEVTSKKGSDHLGHFNSESDHGSKNSRSDQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSINKDRRRSSIHDITSVGNGEILATQGPITGEPNGAATGGSSAKSAKQPSQLPAAPPGVGMYSSPTIGQPIGGPLVSTVGTPVNLPAPPHLAYGAVVPSAPMNMGPVKYSMPHKSDHR*