Gene Details:
- Gene ID: Glyma.08G029400.1.p
- Gene Name: GLYMA_08G029400, Glyma08g03330.1, MYB127
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Glycine max
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: NP_001235940.1 — MYB transcription factor MYB127
- Refseq: XP_028244981.1 — transcription factor MYBS3-like
- Swissprot: Q7XC57 — MYBS3_ORYSJ; Transcription factor MYBS3
- TrEMBL: A0A445J9B8 — A0A445J9B8_GLYSO; Transcription factor MYBS3
- TrEMBL: Q0PJI8 — Q0PJI8_SOYBN; MYB transcription factor MYB127
- STRING: GLYMA08G03330.1 — (Glycine max)
Gene Ontology:
- GO:0006338 — Biological Process — chromatin remodeling
- GO:0006357 — Biological Process — regulation of transcription from RNA polymerase II promoter
- GO:0035066 — Biological Process — positive regulation of histone acetylation
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0003682 — Molecular Function — chromatin binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0003713 — Molecular Function — transcription coactivator activity
- GO:0004402 — Molecular Function — histone acetyltransferase activity
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >Glyma.08G029400.1.p|Glycine_max|MYB_related|Glyma.08G029400.1.p
ATGGGGAGGAAGTGCTCACATTGTGGAACCATAGGCCATAACTCAAGGACCTGCACATCTTTGAGAGGGGCTACTACTAGTTTCGTTGGACTTCGCCTCTTCGGCGTGCAATTAGACAGTACTAATTGTGTTAGCATCAAGAAAAGCTTTAGCATGGACTCCTTACCCTCATCATCATCTTCCTCATTCTCTTCATCAAGACTAACCATTGATGAAAATTCTGACCGAACCTCTTTTGGGTATCTCTCAGATGGTCTCTTAGCTCGAGCCCAAGAGAGGAAGAAAGGAGTGCCATGGACAGAAGAGGAACACAGAATATTCCTTGTTGGACTTGAGAAGCTGGGAAAGGGTGACTGGAGGGGAATCTCTAGAAACTTTGTGACTACAAGAACCCCAACACAAGTGGCAAGCCATGCTCAAAAGTACTTTCTTCGATTGGCAACTATAGATAAGAAAAAGCGACGTTCAAGTCTCTTTGACTTGGTTGGTAGCAACAAAGCAGGTTCTAATTCAGTTTCGGCTCATCAAAAGGATGAGTCTAAATGTGAAGTTAAGAATAATGATGCTGCCACTTTGTCGTTGCTAGGGCGTATAACTTACTTTCAACAAGAAAACAAATCATCAGAGTATAAGCAAGAAACATTTGATAATTGCTCATATCAAAGTCAACCAGGTGAAGAGCATCAAGTCGCAGTTCTTAATCTGGATCTCACTCTTGCAGCCCCCAAGGCAAAGACCCTGCAGGAACAAAATAAGTCATCTCCTTCTGCTCCATTTCTGCTTGGGCCAATTAGCGTGACTTAA
Protein Sequence:
- >Glyma.08G029400.1.p|Glycine_max|MYB_related|Glyma.08G029400.1.p
MGRKCSHCGTIGHNSRTCTSLRGATTSFVGLRLFGVQLDSTNCVSIKKSFSMDSLPSSSSSSFSSSRLTIDENSDRTSFGYLSDGLLARAQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLATIDKKKRRSSLFDLVGSNKAGSNSVSAHQKDESKCEVKNNDAATLSLLGRITYFQQENKSSEYKQETFDNCSYQSQPGEEHQVAVLNLDLTLAAPKAKTLQEQNKSSPSAPFLLGPISVT*