Information report for fgenesh3_pg.C_scaffold_28000005
Gene Details
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Functional Annotation
- Refseq: XP_005843697.1 — hypothetical protein CHLNCDRAFT_54975
- TrEMBL: E1ZRA9 — E1ZRA9_CHLVA; Uncharacterized protein
- STRING: XP_005843697.1 — (Chlorella variabilis)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >fgenesh3_pg.C_scaffold_28000005|Chlorella_variabilis_NC64A|MYB_related|fgenesh3_pg.C_scaffold_28000005
GCAGGGGACTGGCGCCCAGATGCGGTACGTTCGTCGGCATGCGCCGGCGGCCACCTGTACTTCCAGCGCTGCAAGTGTGCGGTGCCGGTCGATTCGTCCTCATTTCGCACGTGTGTCGGACTCCCAGCTTTTTCCCGCCCAAATCCTGCCGCTAGCCATCATCCAGCTGGGCCGTCACCTAAGCTGGCTCTCGTCGGGCAAGCTCTTGGTTGCGGCACGGTTGGAGCGAGGAGATCCATCTCTGCTAAGAAAGGGGCCAGGGGCCGCTCGCCAAGCGCTGCCAGGGTGCACCAGGCGCGGAACTCGGAGCACTCGAGAGCGGACAGGAGGAATGCCGCCCAAGAAGCATTGGAGGCAGCGCTCGGTGCTGCAAATTGGGGCTGATGGAAAACTGGACGGCTGCGCCGCCTGCGAGGACAGCGGCGAGCTGCTGTGCTGCGAGCGCTGCCCGCACACCTTCCACCCACGCTGCTGCGGCTACGCCGGGTTTGACGACGTGCCCGGCCACCCAGAGCCCAACTGGCTCTGCTGGTTCTGTGCGGGACACAATCGGTACAAGCAGTCCACATCCAAACTGGCGGTGAGGAATGGGGACGAGGTGAAGGTGGCATACAACGACAAGTGCGAGGTCTACTATGCTGCCAAGGCCACCTCTGTGACCGCCACCCACGTCACCTGCAAGTACATCCACTTTGCGGACGCGCCACCTGAGAAGCTGCCTCGCACCAGCGTGCGGCTGTGGCGTGGCACGCACGACCCGGCTGCCTGGGTGTTTGATAAGAAGGACTGTGCTTACGAGCCCCGCAGCCGCTGCGCTCCTGTGGACATTCCCAAGCTACAGTCCACTGCCAACGCGGCCCGGGCAGTGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCCGCCGGCAACGGCGGCAGCTGGCGCGGGCGGCAGCACGCCTGGCTCCCCCAAGCCGCTGCAGCAGGCGCAGCAGGCGCAGCAGGCGCAGCAGGGGCAGGGAGGGGCGGCGGCGGCGCCAGCGCGGCCGGGGGCGGGGGCGGCTTCCCCTGTGGCAGCGGCGGGCTTGCGCGGCGGGCAGGAGCCTGCGTCGCCACCCAGCAAGAAGCAGAAGCGGGAGCAGGAGCAGGAGCAGCCTTTGCCTGCCGCTGCTGCCGCCGCTGCCGATGCACGTGAGGGGCAGCGCAAGGACGAGCAGCAGCCGCAGCCCAAGCCAGCACCGCTGCCAGCGGAGCCTGCCCAGCAGGGGGCGGCAGCAGCAAAGCGGAAGGCAGCGGCGGCGGAGCCGGCTGCCGCCGCCGGTGGCAGCGGTGGCAGCAAGCAGGCCCCGGGGCCGTCGTCTAAGAAGCAGCGGAAGGGAGAGGGGGAGGCCGCTCAGGCGAGTGCTCAGGCAGCGCCGGCTGCGGTGCCGGCGGCAGGCGCCAGCGGCGGCAAGCGCCGCCCTGGCCGGCCCAAGGGCAGCGGCAAGAAGCAGCGGCAGGCGCAGCGCGAAGCGGCGGCGGCAGGCAACGGAGGCCAGGGCAGTCCCGCGGAACAAGCCTCTGCTGCGCCTGAGGCGCCCTCTGCAGCCCTGCGCCCCCCAGCCACAGCGCCTGAGAAGGATTCAAAGCCGGCAGCGGCAGCCGCTGGCGAGGCAGGCACAGCGGTCCCCGCCTCCTCACCACAGCTGGCGGCAGCTGCCAGTGGCGACGCGGCAGGCGGCAGCCACGCCGGCGAGCCTGGCGGCAGCCGCCCAGCTGCGGAGGCCGAGGAGCAAGCGGCCGCCGTGGCGCAGCAGCCGAGTAGCGCGGCGGCGAGCGGCGGTGGCGGCGGCGGCAGCGAGCTTGCCTCCGCCAGTGCTGCTGCTCCTTCTGCCAGCGGCGCAGCCAGCCAGAGCCAGGGCGGCGCCGCCAGCGACGGCGGCAGGCTCTCTGGCGGCCCCGCGGCGGCGGCGAGGCGCGAGAGCGGTGCAGAAGAGGCGGAGGCTGCCGCCGCCGCCATGGCCGCCGCGGCCGCCGCCACCGCCGCCGCCACCATCTCGCCTCAGGCGGTGCTGGCGCAGCGGCTGGCTGCGCGGAAGCAGCCCTCGCCGCAGCTGTATGGAGACGCCTATGATTTGCCCAGCGATGAGGACGACGCGGAGCAGGAGGCTGCACAGGCGGCGGCGCCGGCTAGGCAGCAGCAGGGAGCTCAGCAGGGAGCGCAGCAGGCTGCAGGGGAGGAGCAGGGGGAGCCGCAGGAGGGGCAGGCGGCGGCGCAGGAGCAGGGGCAGGCAGCTGAGCCGGGGCGCGCTCCGGAGCAGCCCTCGCAGCAGCAGCAGGCGGAGCGGCTGTCTGGGCAGCAGGCTGGCAGCGGCAGCGACGTGGCTGCCGCCGCAGCTCAGCCGTCGCCGTCGCTGCCGCTACAGCAGCAGCAGCAGCAGGAGGAGGATGAGGAGGATGAGGATGAATGGATATCTATTGACGATATCGTTCTGCAGCCAGAGCCGCACCTCGCAGCGCCTGCCGCCGCCGCCGCCGCCGCCGCGGTGGTCGGCCGGCCGCCGCCGCAGCAGCAGCCCGCGGCCGCCGCCCCCGCCCCGGCTCCCCCGCCGGCGCCTGCCGCCGCGCCGGCCGGTACAGGGGCAGCCGGCGCGGTGGCTGCCGCGCCAGAGGACGCGCCCGTGCCCGCAGCCCCAGCAGCCTGGTCGCCCTCAGAGGTGGCTGCCCTCATCACCGGGGTGCAGCAGTGCGGCGTGAACAAGTGGGAGCAGGTGCGGCGGGCCTTCCCTCAGGAGCTACAGGGGCGCAGCGTGGAGGAGATCCGAGCCAAGTGGCGGTCCATGAAGGACAGGCTGGCGCTGTCGCCGCCCAAGGGCTGTGGTGGGGGTCCCAGCCGCGGCCGCATGGGTGCCTCTGGCCCCGCCGTTGTGGCAGATAGGGTGCTTTCGCCCACCAAGGCCTCGCCCAGAGCTGTGTCTACGCTGCTGCTGGCAGCAGCCCAGCAGGCGTCTGCTGCCGCTGCGGCGGCTGCGGCGGGTGCGGCGGCGGGAGGCCAGCCTGGCGCCTCGCTGGCGGCCGCCGCCGCCACCGCCGCCGCGTCCGACGACTGGCGCCACCCCTCTGCCTTCCCGGCCGCGGCGGGCGCGGGCCTGAAGCTGTCTGCCGGTGCCCTGGCGCTGCGTGTGGGGGACCTGGCGGAGGTGCGGGCGGTGGATGACGACTACCGGGGAGGGTGGTTCCTGGCGCGCCTGCTGCAGTTCCGCACCGAGCCCTCTCAGCTGGGCGAGCGCGTGTCGGTGCTGCTGGAGTATGCCGACTTCCGGGAGGAGGGGGAAGGTGGGCCCAAAACACGCGGGAATGGGTGGCCTTCCCTGCACACCACAGAGGACGGGCGCTGGGTGTTCCCGCGCATCCGCCCCGCCTCCCGCCCGCTCAAGCCGCCCGCGCCGCCCGCCAGCCTGGCGCCGGGGCAACCCGTGGAGGCCTTCCTGAACGATGGCTGGTGGATGGGCGAGGTCGTTTCAGTGGAGCCGGGCACTGTGGCCGTGCGCTTTGAGCCGTGGCCGCTCGGCGAGGGCGACTTCAGCTTCTATGCGCCCGAGCACGTGCGCCCCGCCCACCCGCTGGCCGGGGCCGGCTTTGGCATGGTGGAGGCGCCGCCGCCGCCGGCTGGGTTCACCGAACGCGCACGCCAGGCTCAGCAGCAGATGCAGCAGCTGGAGCGGCTGCTGGGCGGCGGCAGGGCCGGCGCCGGTGCCGCGCCGCCCGGCGGCGGCACGCCGCCGCTGGGCCTGGGCGGCGCGATGCTGCCGGCGCACGCGCACCCTCACCGCCACCAGCGACAGCACGACCACCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACGGCTACGGGCAGCCCGCGCAGCAGGCGGCGGCCGCCCCCCAGCCGCACCAGTCGCCGCCCCGGGGCCTGGGCGGCGCCACCCTGGCCCGCTCCCGCTCCCACCCGGGCCTCAGGTCTCCCAGCCCCGCGTCCGCGGCGGCAGCCCACGGCTGCAGCCCCGCCCCTCAGGGCTCCACGCCGCCGCTGGCGGGGACACACCCGCACGCGGCGCAGCTGCAGCTGGCTCAGCAGCTCGCCCAGCAGCAGCAGCAGCAGGAGCACCTGGCTCGACAGCAGCTGGTGCAGCAGCTGCAGGCTGCGGGGGCAGCGCGCGCGGCGGCGCCGCCGGCGGGGCAGCGCCCCCAGGCGGTGCTGCAGGCTGCGCCAGGGCAGCACCAGCAGGGGCCGCCGCAGCCGGCGCCCCCGCCCGATTTCTTCGCGCTGGCTGTGCGCCAGTTCCGAGCCTCGCTGCCCGAGTGCAGGGCTGTGAGGTACTGCAGCGAGGCCTGCTCCCATGCGCACTGGAAAGCGCACAAGGCAGAGTGCCGGCGCCTGCGCACCGCTGCGGGGAGTGCCCAGCCCTGA
Protein Sequence:
- >fgenesh3_pg.C_scaffold_28000005|Chlorella_variabilis_NC64A|MYB_related|fgenesh3_pg.C_scaffold_28000005
MQGTGAQMRYVRRHAPAATCTSSAASVRCRSIRPHFARVSDSQLFPAQILPLAIIQLGRHLSWLSSGKLLVAARLERGDPSLLRKGPGAARQALPGCTRRGTRSTRERTGGMPPKKHWRQRSVLQIGADGKLDGCAACEDSGELLCCERCPHTFHPRCCGYAGFDDVPGHPEPNWLCWFCAGHNRYKQSTSKLAVRNGDEVKVAYNDKCEVYYAAKATSVTATHVTCKYIHFADAPPEKLPRTSVRLWRGTHDPAAWVFDKKDCAYEPRSRCAPVDIPKLQSTANAARAVAAAAAAAAAAAAPPATAAAGAGGSTPGSPKPLQQAQQAQQAQQGQGGAAAAPARPGAGAASPVAAAGLRGGQEPASPPSKKQKREQEQEQPLPAAAAAAADAREGQRKDEQQPQPKPAPLPAEPAQQGAAAAKRKAAAAEPAAAAGGSGGSKQAPGPSSKKQRKGEGEAAQASAQAAPAAVPAAGASGGKRRPGRPKGSGKKQRQAQREAAAAGNGGQGSPAEQASAAPEAPSAALRPPATAPEKDSKPAAAAAGEAGTAVPASSPQLAAAASGDAAGGSHAGEPGGSRPAAEAEEQAAAVAQQPSSAAASGGGGGGSELASASAAAPSASGAASQSQGGAASDGGRLSGGPAAAARRESGAEEAEAAAAAMAAAAAATAAATISPQAVLAQRLAARKQPSPQLYGDAYDLPSDEDDAEQEAAQAAAPARQQQGAQQGAQQAAGEEQGEPQEGQAAAQEQGQAAEPGRAPEQPSQQQQAERLSGQQAGSGSDVAAAAAQPSPSLPLQQQQQQEEDEEDEDEWISIDDIVLQPEPHLAAPAAAAAAAAVVGRPPPQQQPAAAAPAPAPPPAPAAAPAGTGAAGAVAAAPEDAPVPAAPAAWSPSEVAALITGVQQCGVNKWEQVRRAFPQELQGRSVEEIRAKWRSMKDRLALSPPKGCGGGPSRGRMGASGPAVVADRVLSPTKASPRAVSTLLLAAAQQASAAAAAAAAGAAAGGQPGASLAAAAATAAASDDWRHPSAFPAAAGAGLKLSAGALALRVGDLAEVRAVDDDYRGGWFLARLLQFRTEPSQLGERVSVLLEYADFREEGEGGPKTRGNGWPSLHTTEDGRWVFPRIRPASRPLKPPAPPASLAPGQPVEAFLNDGWWMGEVVSVEPGTVAVRFEPWPLGEGDFSFYAPEHVRPAHPLAGAGFGMVEAPPPPAGFTERARQAQQQMQQLERLLGGGRAGAGAAPPGGGTPPLGLGGAMLPAHAHPHRHQRQHDHHQQQQQQQQQQQHGYGQPAQQAAAAPQPHQSPPRGLGGATLARSRSHPGLRSPSPASAAAAHGCSPAPQGSTPPLAGTHPHAAQLQLAQQLAQQQQQQEHLARQQLVQQLQAAGAARAAAPPAGQRPQAVLQAAPGQHQQGPPQPAPPPDFFALAVRQFRASLPECRAVRYCSEACSHAHWKAHKAECRRLRTAAGSAQP*