Information report for FANhyb_rscf00000145.1.g00013.1
Gene Details
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Functional Annotation
- Refseq: XP_004296816.1 — PREDICTED: protein ALWAYS EARLY 3
- TrEMBL: A0A2P6QY75 — A0A2P6QY75_ROSCH; Putative transcription factor MYB/SANT family
- STRING: XP_004296816.1 — (Fragaria vesca)
- GO:0005730 — Cellular Component — nucleolus
- GO:0016592 — Cellular Component — mediator complex
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Citrullus lanatus: Cla021725
- Cucumis sativus: Cucsa.253300.3, Cucsa.253300.1
- Fragaria vesca: mrna06793.1-v1.0-hybrid
- Gossypium arboreum: Cotton_A_04877_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A02G0465, Gh_D02G0520
- Manihot esculenta: Manes.15G014400.1.p
- Prunus mume: XP_016647952.1, XP_016647953.1
- Prunus persica: Prupe.1G139300.6.p, Prupe.1G139300.1.p, Prupe.1G139300.5.p, Prupe.1G139300.2.p, Prupe.1G139300.4.p, Prupe.1G139300.3.p
- Pyrus bretschneideri: Pbr031037.1
- Ziziphus jujuba: XP_015892701.1, XP_015892700.1, XP_015892699.1, XP_015892698.1, XP_015892697.1
Sequences
CDS Sequence:
- >FANhyb_rscf00000145.1.g00013.1|Fragaria_x_ananassa|MYB_related|FANhyb_rscf00000145.1.g00013.1
ATGGCCCCAGTAAGGAAAACAAAGGGTGTGAATAAGAGGTTTCCTTATAATAATGAGGTTGCGTCTAACAAATATGGAGATACTGCTAACAAAAATAAGCAGAAGAAGAGAAAGTTGTCTGATATGTTAGGGCCTCAATGGACCACTGAAGAGCTGAAGCACTTCTACGAAGGATATCGCAAGTATGGGAGAGACTGGAAGAAGGTTGCTTCTGTAGTATGTCACCGATCTGTGGAGAATGTAGAAGCCCTTTACACTATGAATAGGTGTGAGGTTTGCGTTTACTTGTCAAGTTCTGATGTTTCCGTGTTGCTAGAAGTCCCCAATTGCTTGTTTGCCTACTTATCTCTTCCTGAGGGCACTGCTTCTGTGATTGGCTTAACAGCAATGATGTGTGACTATTACGCTATGCTGGGGCGGTTTTTTTTAAGTGTTAATAGAATCAGGCCTCATGCTGTTAAAAAAAGGACTCCTCGAGTCCCGGTTGCTTCTAATGATAAAGATAACAGCAAAAAGTATTTTTCACCGGCCAGGCAAGGTATAAAAACCAGTACAGATGGTAATGATGTTAACAATGCTCAGGAGATAGCATTTTCCTTGACTGAACCCTCACAGAGAGGTAGTTCTCCCCAAGTTTCCAGGACTCCCAAATTAAAAGCTAAAGGCAGTACTCCATCACCTGTTCAAAATGGCGAAAGGATGTTTGCAGTAACAGATATGAAAATTGCCAGGCCCCATGGTGGGGAATTGGATGAGGTTGGTTGTGAGTTAAGCTTAGGCAGCATGCAGGCTGATTATGGCATGGAGAGATACTATTTAAAGAGGCAAAAAAGGAAAGAAAGTGAAAACAATCATTTGGAAGACGTAAAAGAAAGTAGTAGTGGAACAGAGGAAGAACAATATAATTTAAGTACTGTCAAGGGAAAACTAGGAACTAGAGTTGTGGGTGCAAAAAAGGCAAGTTCCTTCCACAAGAAGAAAACTAAAACAGCAAATGTTGGAAGAGATGAAGACTCTTCCTTTGATGCGTTACTTACTCTGGCAGATCTATCCTTGAGGATGCCTGAAGCAACTGCTGAATTGGAATCGGCTGCACCTGTGGAGGAAGAAAACTTCAACATTGCTAAGAAGTCTAAACTCAAAGGGAATTCTTCAGTAACCATGGTTGAAGATACCACTATGAAAACATCTCAGTTTAACTCTGGAATACAAAAAAGAAAACAGAAGTCGCCAGTTAAAATAAATGAGAATGAAGCTCAGACTGAGTTTCCTTGGAGTGACAATCAAATGATTGAGGCTACAGATGAGGTGAACTATGTGAATAAAGGTAAACGGTCTTCTCATTATAACACACACCAAAAGCATGGGAAATTGGTGAAGCCTGTAGGAAACTCATCTCCTGCTACAGATCGTGAAAGGCAAGAGAAAAATTCAGGTTTATCAACTGTAGAAGTACAATATGCAAACCAGGCCAACTTATCCTTGAGAGACAGGAGTAAACGGAAGGAGGACATACAGAAAGATGCAAAGTCTCTGCAGAGCACATCATATGACCAACCTAATAAACTGGTTCGTTCAGTTCATAAAACGGAACTGGATCTTGAGCGAAGACTTTCTAATTGCTTATCTCGTTATCAAGCGCGGAGATGGTGTGCTTTTGAATGGTTTTATAGTGCAATTGATTACCCATGGTTTGCTAAAAGGGAGTTTGTTGAGTACTTGAATCACGTTGGATTGGGTCATGTTCCAAGATTAACTCGTGTTGAATGGGGTGTTATAAGGAGTTCCCTTGGGAGACCACGGAGATTTTCTGACCAGTTTTTGAAGGAAGAAAAGGAGAAACTTCATCAGTACCGGGAGTCAGTTAGAAAGCATTATGCTGAACTTAATGCTGGTACAAGGGAAGGACTTCCAACTGACTTAGCTCGGCCTTTATCAGTTGGACAACATGTTATTGCTTTTCACCCCAGGTCTAGAGAGATCCATAACGGAACTGTACTAAGCATTGAGCATAGTACGTATCGTGTTCAGTTTGACCAGCCTGAATTAGGAGTTGCAGATATCATGGATATTGATTGCATGCCGTTAAATCCATTGGAAAATGTACCTGCTTCTTTCACAAAGCAAAACATCATTTTCAACAAATCTGAGAACTTCAAGGAGCTCAAGATTAATGAACAACACAAAGAAGGGAAGACTGAAGAGTATATGAAGGTTTTTTCTACTGGCAACCTTAACAGCCCTGCTGTTCCTTGTCATATTCCTCCGTCTACTCCTCAAGCCAACAAATCATCAAAGCATATAGAGCATAAAATTGAAGAAAAAGTATGCTACTGTGAAGTGAAAACTGTCATGCCTAGGATGCAAGCTAAGGAAGCTGATGTACGAGCTCTGTTTGAGTTGACCCGTGCCCTTGACAAAAAGGATGCCGTGGTTTCTGAGTTGAGGCGCATGAATGATGACGTGTTTGAGGATAAGTGCCGAGACGGACATGACTCTATCAAGGATTCTGAGTCTTTTAAAAAGGAATATGCTGCCGTGCTATTACAGCTGAGCGAAATCAATGATCAGCAGTTGAGTGACTGTTTGAGATGGAGAGGAAAACTAATTGCTTTTCATATGCAGGTTTCTTCTGCTCTTCTTTGCTTGAGACAACGAAACACATATAGGGGGAGCTACCCACTTATATCGGCAAATCCCCTGTCCGGCTTTAGTGACTCCAGTGGCCATTCAAGCTCTTTGTGCCATGTCCAAGAACCGGCTACTCATGTGTATGAAATTGTTGAAAGTTCAAGAGCAAAAGCGAGGGAAATGGTTCATGTAGCTATGCAGGCAATCTCATCCTTGAAGAGGGAGAATAACATAGAGAGAATTGAGGAGGTTATAGACTTTGTAAAAAAATCTGATCCTAAGTCAAAGAGTTTATCCAACCAAAGCGAAGACCAATTCCTTTCAGACCTTATCGCAAATTGTGTGGCAGCTTTGTTCATGATTCAGACATGTACAGCACGACAGTTTTCACCGGCTGATGTTGCCTGGGTATTAGATCGTGCCGTCACTAGTTTGAAGCCAATTTGCACACAGAACCTACCAGTCTACGGAGAAATCCAAAAGTGCATGGGAATCGTTAGGAGTCAGATACTGGCGCTCGTGCCTACATAG
Protein Sequence:
- >FANhyb_rscf00000145.1.g00013.1|Fragaria_x_ananassa|MYB_related|FANhyb_rscf00000145.1.g00013.1
MAPVRKTKGVNKRFPYNNEVASNKYGDTANKNKQKKRKLSDMLGPQWTTEELKHFYEGYRKYGRDWKKVASVVCHRSVENVEALYTMNRCEVCVYLSSSDVSVLLEVPNCLFAYLSLPEGTASVIGLTAMMCDYYAMLGRFFLSVNRIRPHAVKKRTPRVPVASNDKDNSKKYFSPARQGIKTSTDGNDVNNAQEIAFSLTEPSQRGSSPQVSRTPKLKAKGSTPSPVQNGERMFAVTDMKIARPHGGELDEVGCELSLGSMQADYGMERYYLKRQKRKESENNHLEDVKESSSGTEEEQYNLSTVKGKLGTRVVGAKKASSFHKKKTKTANVGRDEDSSFDALLTLADLSLRMPEATAELESAAPVEEENFNIAKKSKLKGNSSVTMVEDTTMKTSQFNSGIQKRKQKSPVKINENEAQTEFPWSDNQMIEATDEVNYVNKGKRSSHYNTHQKHGKLVKPVGNSSPATDRERQEKNSGLSTVEVQYANQANLSLRDRSKRKEDIQKDAKSLQSTSYDQPNKLVRSVHKTELDLERRLSNCLSRYQARRWCAFEWFYSAIDYPWFAKREFVEYLNHVGLGHVPRLTRVEWGVIRSSLGRPRRFSDQFLKEEKEKLHQYRESVRKHYAELNAGTREGLPTDLARPLSVGQHVIAFHPRSREIHNGTVLSIEHSTYRVQFDQPELGVADIMDIDCMPLNPLENVPASFTKQNIIFNKSENFKELKINEQHKEGKTEEYMKVFSTGNLNSPAVPCHIPPSTPQANKSSKHIEHKIEEKVCYCEVKTVMPRMQAKEADVRALFELTRALDKKDAVVSELRRMNDDVFEDKCRDGHDSIKDSESFKKEYAAVLLQLSEINDQQLSDCLRWRGKLIAFHMQVSSALLCLRQRNTYRGSYPLISANPLSGFSDSSGHSSSLCHVQEPATHVYEIVESSRAKAREMVHVAMQAISSLKRENNIERIEEVIDFVKKSDPKSKSLSNQSEDQFLSDLIANCVAALFMIQTCTARQFSPADVAWVLDRAVTSLKPICTQNLPVYGEIQKCMGIVRSQILALVPT