Gene Details:

• Gene ID: evm_27.model.AmTr_v1.0_scaffold00147.46
• Gene Name: AMTR_s00147p00088570, LOC18432539
• Gene Family: MYB_related Family
• Description: MYB_related Family protein
• Species: Amborella trichopoda
• Source: MYB_related family gene from PlantTFDB

Protein Features:

• Gene3D:  G3DSA:4.10.60.10
• PROSITE profile:  PS51294
• SuperFamily:  SSF46689
• TIGRFAMs:  TIGR01557
• SMART:  SM00717
• Gene3D:  G3DSA:1.10.10.60
• Pfam:  PF00249
• InterPro:  IPR001878    IPR017930    IPR009057    IPR006447    IPR001005

Annotation Proteins:

• Refseq:  XP_006842705.1  — MYB-like transcription factor ETC1
• Swissprot:  O22059  — CPC_ARATH; Transcription factor CPC
• Swissprot:  Q9LNI5  — ETC1_ARATH; MYB-like transcription factor ETC1
• TrEMBL:  W1PBH2  — W1PBH2_AMBTC; Uncharacterized protein
• STRING:  ERN04380  — (Amborella trichopoda)

Gene Ontology:

• GO:0009751  — Biological Process — response to salicylic acid
• GO:0009753  — Biological Process — response to jasmonic acid
• GO:0009913  — Biological Process — epidermal cell differentiation
• GO:0010063  — Biological Process — positive regulation of trichoblast fate specification
• GO:0080147  — Biological Process — root hair cell development
• GO:1900033  — Biological Process — negative regulation of trichome patterning
• GO:0005634  — Cellular Component — nucleus
• GO:0003677  — Molecular Function — DNA binding

Family Introduction:

• A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.

Literature:

• A novel leaf-specific myb-related protein with a single binding repeat.   DOI:  10.1016/s0378-1119(96)00521-5 ;  PMID:  8996094

Sequences: