Gene Details:

• Gene ID: evm_27.model.AmTr_v1.0_scaffold00010.349
• Gene Name: AMTR_s00010p00249970, LOC18422401
• Gene Family: MYB_related Family
• Description: MYB_related Family protein
• Species: Amborella trichopoda
• Source: MYB_related family gene from PlantTFDB

Protein Features:

• Gene3D:  G3DSA:4.10.60.10
• PROSITE profile:  PS51294
• SuperFamily:  SSF46689
• TIGRFAMs:  TIGR01557
• SMART:  SM00717
• Gene3D:  G3DSA:1.10.10.60
• Pfam:  PF00249
• InterPro:  IPR001878    IPR017930    IPR009057    IPR006447    IPR001005

Annotation Proteins:

• Refseq:  XP_006827136.1  — SWR1-complex protein 4
• Swissprot:  Q8VZL6  — SWC4_ARATH; SWR1-complex protein 4
• TrEMBL:  W1NFX0  — W1NFX0_AMBTC; Uncharacterized protein
• STRING:  ERM94373  — (Amborella trichopoda)

Gene Ontology:

• GO:0045892  — Biological Process — negative regulation of transcription, DNA-templated
• GO:0000812  — Cellular Component — Swr1 complex
• GO:0035267  — Cellular Component — NuA4 histone acetyltransferase complex
• GO:0003677  — Molecular Function — DNA binding

Family Introduction:

• A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.

Literature:

• A novel leaf-specific myb-related protein with a single binding repeat.   DOI:  10.1016/s0378-1119(96)00521-5 ;  PMID:  8996094

Sequences: